RNA–Protein interactions for RNA: ENST00000369096.8

PRDM1-203, Transcript of PR/SET domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRDM1, Length 5,164 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM1-203ENST00000369096 C3orf79P0CE67 100 aa12.95□□□□□ -0.34
PRDM1-203ENST00000369096 LY6G5BQ8NDX9 201 aa12.95□□□□□ -0.34
PRDM1-203ENST00000369096 PIKFYVEQ9Y2I7 2098 aa12.95□□□□□ -0.34
PRDM1-203ENST00000369096 IGHV1-46P01743 117 aa12.94□□□□□ -0.34
PRDM1-203ENST00000369096 DEFB130BP0DP73 79 aa12.94□□□□□ -0.34
PRDM1-203ENST00000369096 DEFB130AP0DP74 79 aa12.94□□□□□ -0.34
PRDM1-203ENST00000369096 MYO16Q9Y6X6 1858 aa12.94□□□□□ -0.34
PRDM1-203ENST00000369096 BMPERQ8N8U9 685 aa12.94□□□□□ -0.34
PRDM1-203ENST00000369096 A0A087WV48 116 aa12.94□□□□□ -0.34
PRDM1-203ENST00000369096 FOXF2Q12947 444 aa12.94□□□□□ -0.34
PRDM1-203ENST00000369096 RBMY1FQ15415 496 aaKnown RBP12.94□□□□□ -0.34
PRDM1-203ENST00000369096 C9orf153Q5TBE3 101 aa12.94□□□□□ -0.34
PRDM1-203ENST00000369096 RASL11AQ6T310 242 aa12.94□□□□□ -0.34
PRDM1-203ENST00000369096 IGHV2-26A0A0B4J1V2 119 aa12.94□□□□□ -0.34
PRDM1-203ENST00000369096 IGHV1-18A0A0C4DH31 117 aa12.94□□□□□ -0.34
PRDM1-203ENST00000369096 SS18Q15532 418 aa12.94□□□□□ -0.34
PRDM1-203ENST00000369096 MIA3Q5JRA6 1907 aa12.94□□□□□ -0.34
PRDM1-203ENST00000369096 LINC00114Q6XXX2 140 aa12.93□□□□□ -0.34
PRDM1-203ENST00000369096 SH2D1AO60880 128 aa12.93□□□□□ -0.34
PRDM1-203ENST00000369096 ZNF883P0CG24 379 aa12.93□□□□□ -0.34
PRDM1-203ENST00000369096 ZNF407Q9C0G0 2248 aa12.93□□□□□ -0.34
PRDM1-203ENST00000369096 A0A087WWL8 130 aa12.93□□□□□ -0.34
PRDM1-203ENST00000369096 ZNF672Q499Z4 452 aaPredicted RBP12.93□□□□□ -0.34
PRDM1-203ENST00000369096 NEUROG3Q9Y4Z2 214 aa12.93□□□□□ -0.34
PRDM1-203ENST00000369096 SCN10AQ9Y5Y9 1956 aa12.93□□□□□ -0.34
PRDM1-203ENST00000369096 LCNL1Q6ZST4 164 aa12.93□□□□□ -0.34
PRDM1-203ENST00000369096 MCRIP2Q9BUT9 160 aaKnown RBP12.93□□□□□ -0.34
PRDM1-203ENST00000369096 MRPS18CQ9Y3D5 142 aaKnown RBP12.93□□□□□ -0.34
PRDM1-203ENST00000369096 COLCA2A8K830 154 aa12.92□□□□□ -0.34
PRDM1-203ENST00000369096 IGFL4Q6B9Z1 124 aa12.92□□□□□ -0.34
PRDM1-203ENST00000369096 SPSB3Q6PJ21 355 aa12.92□□□□□ -0.34
PRDM1-203ENST00000369096 H3BUX3 64 aa12.92□□□□□ -0.34
PRDM1-203ENST00000369096 RPP25LQ8N5L8 163 aaKnown RBP12.92□□□□□ -0.34
PRDM1-203ENST00000369096 LOC102723996A0A087X1L8 192 aa12.92□□□□□ -0.34
PRDM1-203ENST00000369096 SYS1-DBNDD2H3BUS1 97 aa12.92□□□□□ -0.34
PRDM1-203ENST00000369096 MAJINQ3KP22 176 aa12.92□□□□□ -0.34
PRDM1-203ENST00000369096 MRPL14Q6P1L8 145 aaKnown RBP12.92□□□□□ -0.34
PRDM1-203ENST00000369096 LINC00477Q96M19 166 aa12.92□□□□□ -0.34
PRDM1-203ENST00000369096 SMKR1H3BMG3 65 aa12.92□□□□□ -0.34
PRDM1-203ENST00000369096 CD5P06127 495 aa12.92□□□□□ -0.34
PRDM1-203ENST00000369096 PAQR4Q8N4S7 273 aaPredicted RBP12.92□□□□□ -0.34
PRDM1-203ENST00000369096 NUP35Q8NFH5 326 aa12.92□□□□□ -0.34
PRDM1-203ENST00000369096 C1QTNF4Q9BXJ3 329 aa12.92□□□□□ -0.34
PRDM1-203ENST00000369096 LIME1Q9H400 295 aa12.92□□□□□ -0.34
PRDM1-203ENST00000369096 MED12Q93074 2177 aa12.92□□□□□ -0.34
PRDM1-203ENST00000369096 KLRD1Q13241 179 aa12.92□□□□□ -0.34
PRDM1-203ENST00000369096 PSG3Q16557 428 aa12.92□□□□□ -0.34
PRDM1-203ENST00000369096 PLSCR4Q9NRQ2 329 aa12.92□□□□□ -0.34
PRDM1-203ENST00000369096 ADAMTSL5Q6ZMM2 481 aa12.91□□□□□ -0.34
PRDM1-203ENST00000369096 GAGE12BA1L429 117 aa12.91□□□□□ -0.34
PRDM1-203ENST00000369096 BRD3OSQ6XYD6 125 aa12.91□□□□□ -0.34
PRDM1-203ENST00000369096 PIP4P2Q8N4L2 257 aa12.91□□□□□ -0.34
PRDM1-203ENST00000369096 CHAC1Q9BUX1 264 aa12.91□□□□□ -0.34
PRDM1-203ENST00000369096 SOCS3O14543 225 aa12.91□□□□□ -0.34
PRDM1-203ENST00000369096 UBE2V1Q13404 147 aa12.91□□□□□ -0.34
PRDM1-203ENST00000369096 ZNF329Q86UD4 541 aa12.91□□□□□ -0.34
PRDM1-203ENST00000369096 RSPO3Q9BXY4 272 aaPredicted RBP12.91□□□□□ -0.34
PRDM1-203ENST00000369096 AMN1Q8IY45 258 aa12.9□□□□□ -0.34
PRDM1-203ENST00000369096 SCN8AQ9UQD0 1980 aa12.9□□□□□ -0.34
PRDM1-203ENST00000369096 IGHV1-3A0A0C4DH29 117 aa12.9□□□□□ -0.34
PRDM1-203ENST00000369096 VMO1Q7Z5L0 202 aa12.9□□□□□ -0.34
PRDM1-203ENST00000369096 PKDREJQ9NTG1 2253 aa12.9□□□□□ -0.34
PRDM1-203ENST00000369096 A0A0A6YYD4 124 aa12.9□□□□□ -0.34
PRDM1-203ENST00000369096 IGKV1-12A0A0C4DH73 117 aa12.9□□□□□ -0.34
PRDM1-203ENST00000369096 SRRM5B3KS81 715 aa12.9□□□□□ -0.34
PRDM1-203ENST00000369096 IGKV1D-12P01611 117 aa12.9□□□□□ -0.34
PRDM1-203ENST00000369096 IGHV1-8P0DP01 117 aa12.9□□□□□ -0.34
PRDM1-203ENST00000369096 HOXD3P31249 432 aaPredicted RBP12.9□□□□□ -0.34
PRDM1-203ENST00000369096 CITED1Q99966 193 aa12.9□□□□□ -0.34
PRDM1-203ENST00000369096 LY6DQ14210 128 aa12.9□□□□□ -0.35
PRDM1-203ENST00000369096 TRGV9Q99603 122 aa12.9□□□□□ -0.35
PRDM1-203ENST00000369096 E9PLN8 166 aa12.89□□□□□ -0.35
PRDM1-203ENST00000369096 CEACAM8P31997 349 aaPredicted RBP12.89□□□□□ -0.35
PRDM1-203ENST00000369096 HAMPP81172 84 aa12.89□□□□□ -0.35
PRDM1-203ENST00000369096 HGFACQ04756 655 aa12.89□□□□□ -0.35
PRDM1-203ENST00000369096 FGFBP3Q8TAT2 258 aa12.89□□□□□ -0.35
PRDM1-203ENST00000369096 RFNGQ9Y644 331 aa12.89□□□□□ -0.35
PRDM1-203ENST00000369096 TSC2P49815 1807 aa12.88□□□□□ -0.35
PRDM1-203ENST00000369096 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.88□□□□□ -0.35
PRDM1-203ENST00000369096 TMEM200BQ69YZ2 307 aa12.88□□□□□ -0.35
PRDM1-203ENST00000369096 KLHL30-AS1Q8NEE0 82 aa12.88□□□□□ -0.35
PRDM1-203ENST00000369096 TMEM190Q8WZ59 177 aa12.88□□□□□ -0.35
PRDM1-203ENST00000369096 TRAV3A0A0B4J244 114 aa12.88□□□□□ -0.35
PRDM1-203ENST00000369096 TRAV1-1A0A0B4J248 108 aa12.88□□□□□ -0.35
PRDM1-203ENST00000369096 RHPN1-AS1Q9BWJ2 59 aa12.88□□□□□ -0.35
PRDM1-203ENST00000369096 ZNF561-AS1K7EIQ3 104 aa12.88□□□□□ -0.35
PRDM1-203ENST00000369096 EFNA4P52798 201 aa12.88□□□□□ -0.35
PRDM1-203ENST00000369096 GLRX5Q86SX6 157 aa12.88□□□□□ -0.35
PRDM1-203ENST00000369096 MRAPQ8TCY5 172 aa12.88□□□□□ -0.35
PRDM1-203ENST00000369096 C5orf64Q2M2E5 130 aa12.87□□□□□ -0.35
PRDM1-203ENST00000369096 DOCK7Q96N67 2140 aa12.87□□□□□ -0.35
PRDM1-203ENST00000369096 PSPNO60542 156 aa12.87□□□□□ -0.35
PRDM1-203ENST00000369096 INAFM2P0DMQ5 153 aa12.87□□□□□ -0.35
PRDM1-203ENST00000369096 PFN2P35080 140 aa12.87□□□□□ -0.35
PRDM1-203ENST00000369096 PI4KAP42356 2102 aa12.87□□□□□ -0.35
PRDM1-203ENST00000369096 NYNRINQ9P2P1 1898 aaKnown RBP12.87□□□□□ -0.35
PRDM1-203ENST00000369096 H3BMM0 161 aa12.87□□□□□ -0.35
PRDM1-203ENST00000369096 KNCNA6PVL3 124 aa12.87□□□□□ -0.35
PRDM1-203ENST00000369096 FOXG1P55316 489 aaPredicted RBP12.87□□□□□ -0.35
PRDM1-203ENST00000369096 PMVKQ15126 192 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 153.2 ms