RNA–Protein interactions for RNA: ENST00000339362.9

NEO1-202, Transcript of neogenin 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene NEO1, Length 7,342 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEO1-202ENST00000339362 IGHV3-38A0A0C4DH36 116 aa13.53□□□□□ -0.24
NEO1-202ENST00000339362 TIAF1O95411 115 aa13.53□□□□□ -0.24
NEO1-202ENST00000339362 IGHV1-2P23083 117 aa13.53□□□□□ -0.24
NEO1-202ENST00000339362 TIMP3P35625 211 aa13.53□□□□□ -0.24
NEO1-202ENST00000339362 ID3Q02535 119 aa13.53□□□□□ -0.24
NEO1-202ENST00000339362 CRYBA4P53673 196 aa13.52□□□□□ -0.24
NEO1-202ENST00000339362 RFPL3SP0C7P2 107 aa13.52□□□□□ -0.24
NEO1-202ENST00000339362 BRD3OSQ6XYD6 125 aa13.52□□□□□ -0.24
NEO1-202ENST00000339362 SPATA25Q9BR10 227 aa13.52□□□□□ -0.24
NEO1-202ENST00000339362 C1QTNF4Q9BXJ3 329 aa13.52□□□□□ -0.24
NEO1-202ENST00000339362 CARHSP1Q9Y2V2 147 aaKnown RBP13.52□□□□□ -0.24
NEO1-202ENST00000339362 TGFBR3LH3BV60 316 aa13.52□□□□□ -0.24
NEO1-202ENST00000339362 TRBV25-1A0A075B6N4 114 aa13.52□□□□□ -0.25
NEO1-202ENST00000339362 HIST1H2BKO60814 126 aa13.52□□□□□ -0.25
NEO1-202ENST00000339362 HIST1H2BJP06899 126 aa13.52□□□□□ -0.25
NEO1-202ENST00000339362 HIST1H2BOP23527 126 aa13.52□□□□□ -0.25
NEO1-202ENST00000339362 HIST1H2BBP33778 126 aa13.52□□□□□ -0.25
NEO1-202ENST00000339362 HIST1H2BDP58876 126 aa13.52□□□□□ -0.25
NEO1-202ENST00000339362 HIST1H2BCP62807 126 aa13.52□□□□□ -0.25
NEO1-202ENST00000339362 HIST2H2BEQ16778 126 aa13.52□□□□□ -0.25
NEO1-202ENST00000339362 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.52□□□□□ -0.25
NEO1-202ENST00000339362 HIST1H2BHQ93079 126 aa13.52□□□□□ -0.25
NEO1-202ENST00000339362 HIST1H2BNQ99877 126 aa13.52□□□□□ -0.25
NEO1-202ENST00000339362 HIST1H2BMQ99879 126 aa13.52□□□□□ -0.25
NEO1-202ENST00000339362 ARFGEF3Q5TH69 2177 aa13.52□□□□□ -0.25
NEO1-202ENST00000339362 LINC00114Q6XXX2 140 aa13.52□□□□□ -0.25
NEO1-202ENST00000339362 RTBDNQ9BSG5 229 aaPredicted RBP13.52□□□□□ -0.25
NEO1-202ENST00000339362 TSSC4Q9Y5U2 329 aaPredicted RBP13.52□□□□□ -0.25
NEO1-202ENST00000339362 A8MWP6 167 aa13.52□□□□□ -0.25
NEO1-202ENST00000339362 SHISA9B4DS77 424 aa13.52□□□□□ -0.25
NEO1-202ENST00000339362 BRWD3Q6RI45 1802 aa13.51□□□□□ -0.25
NEO1-202ENST00000339362 PSG7Q13046 419 aa13.51□□□□□ -0.25
NEO1-202ENST00000339362 GAGE7O76087 117 aa13.51□□□□□ -0.25
NEO1-202ENST00000339362 GAGE12FP0CL80 117 aa13.51□□□□□ -0.25
NEO1-202ENST00000339362 GAGE12GP0CL81 117 aa13.51□□□□□ -0.25
NEO1-202ENST00000339362 GAGE12IP0CL82 117 aa13.51□□□□□ -0.25
NEO1-202ENST00000339362 MORN2Q502X0 79 aa13.51□□□□□ -0.25
NEO1-202ENST00000339362 STPG4Q8N801 248 aa13.51□□□□□ -0.25
NEO1-202ENST00000339362 XCL2Q9UBD3 114 aa13.51□□□□□ -0.25
NEO1-202ENST00000339362 ZC2HC1BQ5TFG8 222 aa13.51□□□□□ -0.25
NEO1-202ENST00000339362 RPRMLQ8N4K4 120 aa13.51□□□□□ -0.25
NEO1-202ENST00000339362 XIRP1Q702N8 1843 aaKnown RBP13.5□□□□□ -0.25
NEO1-202ENST00000339362 IGKV1-5P01602 117 aa13.5□□□□□ -0.25
NEO1-202ENST00000339362 RPL18AQ02543 176 aaKnown RBP13.5□□□□□ -0.25
NEO1-202ENST00000339362 HIST1H2BLQ99880 126 aa13.5□□□□□ -0.25
NEO1-202ENST00000339362 FAM110DQ8TAY7 271 aaPredicted RBP13.5□□□□□ -0.25
NEO1-202ENST00000339362 LIME1Q9H400 295 aa13.5□□□□□ -0.25
NEO1-202ENST00000339362 IGKV1D-43A0A0B4J1Z2 117 aa13.5□□□□□ -0.25
NEO1-202ENST00000339362 GAGE12HA6NDE8 117 aa13.5□□□□□ -0.25
NEO1-202ENST00000339362 SP9P0CG40 484 aa13.5□□□□□ -0.25
NEO1-202ENST00000339362 SUPT4H1P63272 117 aaKnown RBP13.5□□□□□ -0.25
NEO1-202ENST00000339362 DLEU1O43261 78 aa13.5□□□□□ -0.25
NEO1-202ENST00000339362 FGF6P10767 208 aa13.5□□□□□ -0.25
NEO1-202ENST00000339362 PRDM6Q9NQX0 595 aa13.5□□□□□ -0.25
NEO1-202ENST00000339362 UBE2V1Q13404 147 aa13.5□□□□□ -0.25
NEO1-202ENST00000339362 ZNF362Q5T0B9 420 aaPredicted RBP13.5□□□□□ -0.25
NEO1-202ENST00000339362 CHCHD2Q9Y6H1 151 aaPredicted RBP13.5□□□□□ -0.25
NEO1-202ENST00000339362 SPATA31B1PQ5VZV4 182 aa13.49□□□□□ -0.25
NEO1-202ENST00000339362 SYNJ2BPP57105 145 aa13.49□□□□□ -0.25
NEO1-202ENST00000339362 TM2D1Q9BX74 207 aa13.49□□□□□ -0.25
NEO1-202ENST00000339362 PLPPR1Q8TBJ4 325 aa13.49□□□□□ -0.25
NEO1-202ENST00000339362 IGKV1OR2-108A0A075B7D4 117 aa13.49□□□□□ -0.25
NEO1-202ENST00000339362 FAM166AQ6J272 317 aa13.49□□□□□ -0.25
NEO1-202ENST00000339362 PRSS57Q6UWY2 283 aa13.49□□□□□ -0.25
NEO1-202ENST00000339362 SPTSSBQ8NFR3 76 aa13.49□□□□□ -0.25
NEO1-202ENST00000339362 VSIRQ9H7M9 311 aa13.49□□□□□ -0.25
NEO1-202ENST00000339362 RALGAPA2Q2PPJ7 1873 aa13.49□□□□□ -0.25
NEO1-202ENST00000339362 UTF1Q5T230 341 aa13.48□□□□□ -0.25
NEO1-202ENST00000339362 BRCA1P38398 1863 aaKnown RBP13.48□□□□□ -0.25
NEO1-202ENST00000339362 PDCD11Q14690 1871 aaKnown RBP13.48□□□□□ -0.25
NEO1-202ENST00000339362 ANKRD29Q8N6D5 301 aa13.48□□□□□ -0.25
NEO1-202ENST00000339362 UBE2CO00762 179 aa13.48□□□□□ -0.25
NEO1-202ENST00000339362 RNASE2P10153 161 aaKnown RBP13.48□□□□□ -0.25
NEO1-202ENST00000339362 Q9HAA7 133 aa13.48□□□□□ -0.25
NEO1-202ENST00000339362 AMN1Q8IY45 258 aa13.48□□□□□ -0.25
NEO1-202ENST00000339362 NUP35Q8NFH5 326 aa13.48□□□□□ -0.25
NEO1-202ENST00000339362 RNASE6Q93091 150 aaKnown RBP13.48□□□□□ -0.25
NEO1-202ENST00000339362 PLXNA1Q9UIW2 1896 aa13.48□□□□□ -0.25
NEO1-202ENST00000339362 DOCK11Q5JSL3 2073 aa13.48□□□□□ -0.25
NEO1-202ENST00000339362 LOC105371267A0A1B0GV96 52 aa13.48□□□□□ -0.25
NEO1-202ENST00000339362 C18orf12Q96KH6 178 aa13.48□□□□□ -0.25
NEO1-202ENST00000339362 AZU1P20160 251 aa13.48□□□□□ -0.25
NEO1-202ENST00000339362 VWC2Q2TAL6 325 aa13.48□□□□□ -0.25
NEO1-202ENST00000339362 TEX38Q6PEX7 206 aa13.48□□□□□ -0.25
NEO1-202ENST00000339362 RNF166Q96A37 237 aaPredicted RBP13.48□□□□□ -0.25
NEO1-202ENST00000339362 SS18L2Q9UHA2 77 aa13.48□□□□□ -0.25
NEO1-202ENST00000339362 H3BUX3 64 aa13.47□□□□□ -0.25
NEO1-202ENST00000339362 PSME4Q14997 1843 aa13.47□□□□□ -0.25
NEO1-202ENST00000339362 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.47□□□□□ -0.25
NEO1-202ENST00000339362 MBD3L4A6NDZ8 208 aaPredicted RBP13.47□□□□□ -0.25
NEO1-202ENST00000339362 MBD3L3A6NE82 208 aaPredicted RBP13.47□□□□□ -0.25
NEO1-202ENST00000339362 MBD3L5A6NJ08 208 aaPredicted RBP13.47□□□□□ -0.25
NEO1-202ENST00000339362 MBD3L2Q8NHZ7 208 aaPredicted RBP13.47□□□□□ -0.25
NEO1-202ENST00000339362 KLK9Q9UKQ9 250 aa13.47□□□□□ -0.25
NEO1-202ENST00000339362 TP53TG1Q9Y2A0 90 aa13.47□□□□□ -0.25
NEO1-202ENST00000339362 MPDZO75970 2070 aa13.47□□□□□ -0.25
NEO1-202ENST00000339362 IGKV2D-24A0A075B6R9 120 aa13.47□□□□□ -0.25
NEO1-202ENST00000339362 PAX9P55771 341 aa13.47□□□□□ -0.25
NEO1-202ENST00000339362 DEFB131AP59861 70 aa13.47□□□□□ -0.25
NEO1-202ENST00000339362 Q71RC1 249 aaPredicted RBP13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms