RNA–Protein interactions for RNA: ENST00000334414.10

PTPRB-202, Transcript of protein tyrosine phosphatase, receptor type B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPRB, Length 12,316 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRB-202ENST00000334414 ZCCHC24Q8N2G6 241 aaKnown RBP4.53□□□□□ -1.68
PTPRB-202ENST00000334414 TP53TG1Q9Y2A0 90 aa4.53□□□□□ -1.68
PTPRB-202ENST00000334414 TRGV4A0A0C4DH28 118 aa4.53□□□□□ -1.68
PTPRB-202ENST00000334414 A0A0A6YYD4 124 aa4.53□□□□□ -1.68
PTPRB-202ENST00000334414 CRYBA2P53672 197 aa4.53□□□□□ -1.68
PTPRB-202ENST00000334414 CENPVQ7Z7K6 275 aaPredicted RBP4.53□□□□□ -1.68
PTPRB-202ENST00000334414 ZNRF1Q8ND25 227 aa4.53□□□□□ -1.68
PTPRB-202ENST00000334414 GPHA2Q96T91 129 aa4.53□□□□□ -1.68
PTPRB-202ENST00000334414 BRCA1P38398 1863 aaKnown RBP4.53□□□□□ -1.69
PTPRB-202ENST00000334414 TRPM6Q9BX84 2022 aa4.52□□□□□ -1.69
PTPRB-202ENST00000334414 FAM219BQ5XKK7 198 aa4.52□□□□□ -1.69
PTPRB-202ENST00000334414 A0A087WX48 190 aa4.52□□□□□ -1.69
PTPRB-202ENST00000334414 TRAV40A0A0B4J280 105 aa4.52□□□□□ -1.69
PTPRB-202ENST00000334414 hADV29S1A0JD25 119 aa4.52□□□□□ -1.69
PTPRB-202ENST00000334414 ZNF883P0CG24 379 aa4.52□□□□□ -1.69
PTPRB-202ENST00000334414 DSCR9P59020 149 aa4.52□□□□□ -1.69
PTPRB-202ENST00000334414 C16orf47Q6ZP98 133 aaPredicted RBP4.52□□□□□ -1.69
PTPRB-202ENST00000334414 WBP1Q96G27 269 aa4.52□□□□□ -1.69
PTPRB-202ENST00000334414 PDE6GP18545 87 aa4.52□□□□□ -1.69
PTPRB-202ENST00000334414 C6orf226Q5I0X4 101 aa4.52□□□□□ -1.69
PTPRB-202ENST00000334414 ZNF493Q6ZR52 646 aa4.52□□□□□ -1.69
PTPRB-202ENST00000334414 LTAP01374 205 aa4.52□□□□□ -1.69
PTPRB-202ENST00000334414 RHOHQ15669 191 aa4.52□□□□□ -1.69
PTPRB-202ENST00000334414 SLC22A18ASQ8N1D0 253 aa4.52□□□□□ -1.69
PTPRB-202ENST00000334414 PLA2G2FQ9BZM2 168 aa4.52□□□□□ -1.69
PTPRB-202ENST00000334414 SRRM5B3KS81 715 aa4.52□□□□□ -1.69
PTPRB-202ENST00000334414 F8VRH5 84 aa4.52□□□□□ -1.69
PTPRB-202ENST00000334414 LILRA1O75019 489 aa4.52□□□□□ -1.69
PTPRB-202ENST00000334414 PRDM6Q9NQX0 595 aa4.52□□□□□ -1.69
PTPRB-202ENST00000334414 H0YGX0 51 aa4.52□□□□□ -1.69
PTPRB-202ENST00000334414 C2orf66Q6UXQ4 117 aa4.52□□□□□ -1.69
PTPRB-202ENST00000334414 C15orf53Q8NAA6 179 aa4.52□□□□□ -1.69
PTPRB-202ENST00000334414 V9GYY9 64 aa4.52□□□□□ -1.69
PTPRB-202ENST00000334414 H0YJW9 148 aa4.52□□□□□ -1.69
PTPRB-202ENST00000334414 NTN3O00634 580 aaPredicted RBP4.52□□□□□ -1.69
PTPRB-202ENST00000334414 FOXI2Q6ZQN5 318 aa4.52□□□□□ -1.69
PTPRB-202ENST00000334414 COX6B1P14854 86 aa4.52□□□□□ -1.69
PTPRB-202ENST00000334414 TRAV41A0A0B4J266 112 aa4.52□□□□□ -1.69
PTPRB-202ENST00000334414 ETDBQ3ZM63 59 aa4.52□□□□□ -1.69
PTPRB-202ENST00000334414 DPH3Q96FX2 82 aa4.52□□□□□ -1.69
PTPRB-202ENST00000334414 ZNF319Q9P2F9 582 aa4.52□□□□□ -1.69
PTPRB-202ENST00000334414 CDCP2Q5VXM1 449 aa4.51□□□□□ -1.69
PTPRB-202ENST00000334414 VSIG2Q96IQ7 327 aa4.51□□□□□ -1.69
PTPRB-202ENST00000334414 TRAV12-1A0A0B4J245 112 aa4.51□□□□□ -1.69
PTPRB-202ENST00000334414 TAX1BP3O14907 124 aa4.51□□□□□ -1.69
PTPRB-202ENST00000334414 SMRP1Q8NCR6 262 aa4.51□□□□□ -1.69
PTPRB-202ENST00000334414 C1orf43Q9BWL3 253 aa4.51□□□□□ -1.69
PTPRB-202ENST00000334414 PRSS22Q9GZN4 317 aa4.51□□□□□ -1.69
PTPRB-202ENST00000334414 DAZ1Q9NQZ3 744 aaKnown RBP4.51□□□□□ -1.69
PTPRB-202ENST00000334414 IGKV1-9A0A0C4DH69 117 aa4.51□□□□□ -1.69
PTPRB-202ENST00000334414 LINC01565O15544 149 aa4.51□□□□□ -1.69
PTPRB-202ENST00000334414 CECR9P0C854 216 aa4.51□□□□□ -1.69
PTPRB-202ENST00000334414 SS18L2Q9UHA2 77 aa4.51□□□□□ -1.69
PTPRB-202ENST00000334414 IGHV1-69DA0A0B4J2H0 117 aa4.51□□□□□ -1.69
PTPRB-202ENST00000334414 RBM3P98179 157 aaKnown RBP4.51□□□□□ -1.69
PTPRB-202ENST00000334414 TMEM14BQ9NUH8 114 aa4.51□□□□□ -1.69
PTPRB-202ENST00000334414 PCM1Q15154 2024 aa4.51□□□□□ -1.69
PTPRB-202ENST00000334414 MRPL55Q7Z7F7 128 aaKnown RBP4.51□□□□□ -1.69
PTPRB-202ENST00000334414 SCRT2Q9NQ03 307 aa4.51□□□□□ -1.69
PTPRB-202ENST00000334414 C17orf100A8MU93 164 aa4.51□□□□□ -1.69
PTPRB-202ENST00000334414 NCR2O95944 276 aa4.51□□□□□ -1.69
PTPRB-202ENST00000334414 LEAP2Q969E1 77 aa4.51□□□□□ -1.69
PTPRB-202ENST00000334414 A0A0B4J2C4 111 aa4.51□□□□□ -1.69
PTPRB-202ENST00000334414 GAS1P54826 345 aa4.51□□□□□ -1.69
PTPRB-202ENST00000334414 BSPH1Q075Z2 132 aa4.51□□□□□ -1.69
PTPRB-202ENST00000334414 IGKV2-40A0A087WW87 121 aaPredicted RBP4.51□□□□□ -1.69
PTPRB-202ENST00000334414 C9JQL5 133 aa4.51□□□□□ -1.69
PTPRB-202ENST00000334414 IGKV2D-40P01614 121 aaPredicted RBP4.51□□□□□ -1.69
PTPRB-202ENST00000334414 WNT2P09544 360 aa4.51□□□□□ -1.69
PTPRB-202ENST00000334414 UBE2BP63146 152 aa4.51□□□□□ -1.69
PTPRB-202ENST00000334414 IGHV3-64A0A075B6Q5 118 aa4.51□□□□□ -1.69
PTPRB-202ENST00000334414 MST1LQ2TV78 715 aa4.51□□□□□ -1.69
PTPRB-202ENST00000334414 JMJD7-PLA2G4BH0Y9G9 81 aa4.5□□□□□ -1.69
PTPRB-202ENST00000334414 H3BT86 120 aa4.5□□□□□ -1.69
PTPRB-202ENST00000334414 IGLV3-12A0A075B6K2 115 aa4.5□□□□□ -1.69
PTPRB-202ENST00000334414 LYPD3O95274 346 aa4.5□□□□□ -1.69
PTPRB-202ENST00000334414 ZNF114Q8NC26 417 aa4.5□□□□□ -1.69
PTPRB-202ENST00000334414 ZNF784Q8NCA9 323 aaPredicted RBP4.5□□□□□ -1.69
PTPRB-202ENST00000334414 PMS2P5A8MQ11 134 aa4.5□□□□□ -1.69
PTPRB-202ENST00000334414 LCN12Q6JVE5 192 aa4.5□□□□□ -1.69
PTPRB-202ENST00000334414 SMIM2Q9BVW6 85 aa4.5□□□□□ -1.69
PTPRB-202ENST00000334414 FUSP35637 526 aaKnown RBP eCLIP4.5□□□□□ -1.69
PTPRB-202ENST00000334414 SUMO4Q6EEV6 95 aa4.5□□□□□ -1.69
PTPRB-202ENST00000334414 LYZL4Q96KX0 146 aa4.5□□□□□ -1.69
PTPRB-202ENST00000334414 IGKV1-5P01602 117 aa4.5□□□□□ -1.69
PTPRB-202ENST00000334414 PSG7Q13046 419 aa4.5□□□□□ -1.69
PTPRB-202ENST00000334414 LENEPQ9Y5L5 61 aa4.5□□□□□ -1.69
PTPRB-202ENST00000334414 TRBV25-1A0A075B6N4 114 aa4.5□□□□□ -1.69
PTPRB-202ENST00000334414 CCL25O15444 150 aa4.5□□□□□ -1.69
PTPRB-202ENST00000334414 IGLL1P15814 213 aa4.5□□□□□ -1.69
PTPRB-202ENST00000334414 MP68P56378 58 aa4.5□□□□□ -1.69
PTPRB-202ENST00000334414 C12orf74Q32Q52 190 aa4.5□□□□□ -1.69
PTPRB-202ENST00000334414 NKAPP1Q8N9T2 125 aa4.5□□□□□ -1.69
PTPRB-202ENST00000334414 IMMP1LQ96LU5 166 aa4.5□□□□□ -1.69
PTPRB-202ENST00000334414 TNRC6AQ8NDV7 1962 aaKnown RBP4.5□□□□□ -1.69
PTPRB-202ENST00000334414 DOCK4Q8N1I0 1966 aa4.5□□□□□ -1.69
PTPRB-202ENST00000334414 C3orf36Q3SXR2 165 aa4.5□□□□□ -1.69
PTPRB-202ENST00000334414 PIFOQ8TCI5 191 aa4.5□□□□□ -1.69
PTPRB-202ENST00000334414 SAP25Q8TEE9 199 aa4.5□□□□□ -1.69
PTPRB-202ENST00000334414 RMI2Q96E14 147 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms