RNA–Protein interactions for RNA: ENST00000295927.3

PTX3-201, Transcript of pentraxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTX3, Length 1,940 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTX3-201ENST00000295927 OR4X2Q8NGF9 303 aa17.63■□□□□ 0.41
PTX3-201ENST00000295927 SMCO4Q9NRQ5 59 aa17.63■□□□□ 0.41
PTX3-201ENST00000295927 DNAJC9-AS1A6NH13 148 aa17.62■□□□□ 0.41
PTX3-201ENST00000295927 IGLC2P0DOY2 106 aa17.62■□□□□ 0.41
PTX3-201ENST00000295927 TRBV20OR9-2A0A075B6H5 130 aa17.62■□□□□ 0.41
PTX3-201ENST00000295927 CLPSL1A2RUU4 121 aa17.62■□□□□ 0.41
PTX3-201ENST00000295927 C2CD4CQ8TF44 421 aa17.62■□□□□ 0.41
PTX3-201ENST00000295927 ANK3Q12955 4377 aaKnown RBP17.62■□□□□ 0.41
PTX3-201ENST00000295927 NOTCH2Q04721 2471 aa17.61■□□□□ 0.41
PTX3-201ENST00000295927 PGPA6NDG6 321 aa17.61■□□□□ 0.41
PTX3-201ENST00000295927 RPL35P42766 123 aaKnown RBP17.61■□□□□ 0.41
PTX3-201ENST00000295927 SLC35B1P78383 322 aa17.61■□□□□ 0.41
PTX3-201ENST00000295927 TMEM160Q9NX00 188 aa17.61■□□□□ 0.41
PTX3-201ENST00000295927 A0A087WWC5 75 aa17.6■□□□□ 0.41
PTX3-201ENST00000295927 S100A7P31151 101 aa17.6■□□□□ 0.41
PTX3-201ENST00000295927 RPL15P61313 204 aaKnown RBP17.6■□□□□ 0.41
PTX3-201ENST00000295927 C17orf77Q96MU5 243 aa17.6■□□□□ 0.41
PTX3-201ENST00000295927 Q9H3A6 140 aa17.6■□□□□ 0.41
PTX3-201ENST00000295927 ESM1Q9NQ30 184 aa17.6■□□□□ 0.41
PTX3-201ENST00000295927 RNF24Q9Y225 148 aa17.6■□□□□ 0.41
PTX3-201ENST00000295927 TRBV19A0A075B6N1 114 aa17.6■□□□□ 0.41
PTX3-201ENST00000295927 TEX38Q6PEX7 206 aa17.6■□□□□ 0.41
PTX3-201ENST00000295927 HELTA6NFD8 242 aa17.59■□□□□ 0.41
PTX3-201ENST00000295927 PGPEP1LA6NFU8 196 aa17.59■□□□□ 0.41
PTX3-201ENST00000295927 SLC25A5P05141 298 aaKnown RBP17.59■□□□□ 0.41
PTX3-201ENST00000295927 LINC01551Q86U37 167 aa17.59■□□□□ 0.41
PTX3-201ENST00000295927 FAM181BA6NEQ2 426 aa17.59■□□□□ 0.41
PTX3-201ENST00000295927 RPL7P18124 248 aaKnown RBP17.59■□□□□ 0.41
PTX3-201ENST00000295927 OR8I2Q8N0Y5 310 aa17.59■□□□□ 0.41
PTX3-201ENST00000295927 TCEAL7Q9BRU2 100 aa17.59■□□□□ 0.41
PTX3-201ENST00000295927 SERTAD4Q9NUC0 356 aa17.59■□□□□ 0.41
PTX3-201ENST00000295927 AURKAIP1Q9NWT8 199 aaPredicted RBP17.59■□□□□ 0.41
PTX3-201ENST00000295927 PEX7O00628 323 aa17.58■□□□□ 0.4
PTX3-201ENST00000295927 LY6G6DO95868 133 aa17.58■□□□□ 0.4
PTX3-201ENST00000295927 RPLP1P05386 114 aaKnown RBP17.58■□□□□ 0.4
PTX3-201ENST00000295927 GNG5P63218 68 aa17.58■□□□□ 0.4
PTX3-201ENST00000295927 FOXE3Q13461 319 aa17.58■□□□□ 0.4
PTX3-201ENST00000295927 METTL26Q96S19 204 aa17.58■□□□□ 0.4
PTX3-201ENST00000295927 EPDR1Q9UM22 224 aa17.58■□□□□ 0.4
PTX3-201ENST00000295927 C9JCJ5 164 aa17.57■□□□□ 0.4
PTX3-201ENST00000295927 ZNF207O43670 478 aaKnown RBP17.57■□□□□ 0.4
PTX3-201ENST00000295927 SCGB2A2Q13296 93 aa17.57■□□□□ 0.4
PTX3-201ENST00000295927 RNF212Q495C1 297 aa17.57■□□□□ 0.4
PTX3-201ENST00000295927 ISOC2Q96AB3 205 aa17.57■□□□□ 0.4
PTX3-201ENST00000295927 OR5B12Q96R08 314 aa17.57■□□□□ 0.4
PTX3-201ENST00000295927 TUBA4BQ9H853 241 aa17.57■□□□□ 0.4
PTX3-201ENST00000295927 OTORQ9NRC9 128 aa17.57■□□□□ 0.4
PTX3-201ENST00000295927 OTOGQ6ZRI0 2925 aa17.57■□□□□ 0.4
PTX3-201ENST00000295927 NDUFA4O00483 81 aa17.57■□□□□ 0.4
PTX3-201ENST00000295927 TSPAN4O14817 238 aa17.57■□□□□ 0.4
PTX3-201ENST00000295927 BUB3O43684 328 aa17.57■□□□□ 0.4
PTX3-201ENST00000295927 ELANEP08246 267 aa17.57■□□□□ 0.4
PTX3-201ENST00000295927 FAM209BQ5JX69 171 aa17.57■□□□□ 0.4
PTX3-201ENST00000295927 OCC1Q8TAD7 63 aa17.57■□□□□ 0.4
PTX3-201ENST00000295927 HIST1H2BAQ96A08 127 aa17.57■□□□□ 0.4
PTX3-201ENST00000295927 TMA7Q9Y2S6 64 aaKnown RBP17.57■□□□□ 0.4
PTX3-201ENST00000295927 EXOC3-AS1Q8N2X6 119 aa17.56■□□□□ 0.4
PTX3-201ENST00000295927 C5orf17Q8NAS9 161 aa17.56■□□□□ 0.4
PTX3-201ENST00000295927 LINC00479Q96M42 142 aa17.56■□□□□ 0.4
PTX3-201ENST00000295927 PEF1Q9UBV8 284 aaKnown RBP17.56■□□□□ 0.4
PTX3-201ENST00000295927 SMAD5-AS1Q9Y6J3 95 aa17.56■□□□□ 0.4
PTX3-201ENST00000295927 SLC17A3O00476 420 aa17.55■□□□□ 0.4
PTX3-201ENST00000295927 GGCTO75223 188 aaKnown RBP17.55■□□□□ 0.4
PTX3-201ENST00000295927 APOHP02749 345 aaPredicted RBP17.55■□□□□ 0.4
PTX3-201ENST00000295927 CENPWQ5EE01 88 aa17.55■□□□□ 0.4
PTX3-201ENST00000295927 UNQ9165/PRO28630Q6UXU0 137 aa17.55■□□□□ 0.4
PTX3-201ENST00000295927 IGHV3-66A0A0C4DH42 116 aa17.55■□□□□ 0.4
PTX3-201ENST00000295927 SRD5A1P18405 259 aa17.55■□□□□ 0.4
PTX3-201ENST00000295927 CNN1P51911 297 aaKnown RBP17.55■□□□□ 0.4
PTX3-201ENST00000295927 SIGLEC15Q6ZMC9 328 aa17.55■□□□□ 0.4
PTX3-201ENST00000295927 MYOZ3Q8TDC0 251 aa17.55■□□□□ 0.4
PTX3-201ENST00000295927 U3KQE9 123 aa17.55■□□□□ 0.4
PTX3-201ENST00000295927 MT-ND4LP03901 98 aa17.54■□□□□ 0.4
PTX3-201ENST00000295927 GNG4P50150 75 aa17.54■□□□□ 0.4
PTX3-201ENST00000295927 PDE6HQ13956 83 aa17.54■□□□□ 0.4
PTX3-201ENST00000295927 Q6ZSV7 163 aa17.54■□□□□ 0.4
PTX3-201ENST00000295927 LYPD1Q8N2G4 141 aa17.54■□□□□ 0.4
PTX3-201ENST00000295927 RPH3ALQ9UNE2 315 aa17.54■□□□□ 0.4
PTX3-201ENST00000295927 IGHV3OR16-13A0A075B7E8 117 aa17.53■□□□□ 0.4
PTX3-201ENST00000295927 IGHV3-49A0A0A0MS15 119 aa17.53■□□□□ 0.4
PTX3-201ENST00000295927 IGHV3-74A0A0B4J1X5 117 aa17.53■□□□□ 0.4
PTX3-201ENST00000295927 CLDN34H7C241 214 aa17.53■□□□□ 0.4
PTX3-201ENST00000295927 RNF152Q8N8N0 203 aa17.53■□□□□ 0.4
PTX3-201ENST00000295927 CTDSP1Q9GZU7 261 aa17.53■□□□□ 0.4
PTX3-201ENST00000295927 TMEM242Q9NWH2 141 aa17.53■□□□□ 0.4
PTX3-201ENST00000295927 CDC42EP3Q9UKI2 254 aa17.53■□□□□ 0.4
PTX3-201ENST00000295927 PRELID1Q9Y255 219 aa17.53■□□□□ 0.4
PTX3-201ENST00000295927 LY96Q9Y6Y9 160 aa17.53■□□□□ 0.4
PTX3-201ENST00000295927 TRAV34A0A0B4J273 112 aa17.53■□□□□ 0.4
PTX3-201ENST00000295927 COLCA2A8K830 154 aa17.53■□□□□ 0.4
PTX3-201ENST00000295927 TAS2R60P59551 318 aa17.53■□□□□ 0.4
PTX3-201ENST00000295927 C1orf194Q5T5A4 169 aa17.53■□□□□ 0.4
PTX3-201ENST00000295927 C15orf54Q8N8G6 183 aa17.53■□□□□ 0.4
PTX3-201ENST00000295927 IGF2BP2-AS1Q96M15 143 aa17.53■□□□□ 0.4
PTX3-201ENST00000295927 ATG101Q9BSB4 218 aa17.53■□□□□ 0.4
PTX3-201ENST00000295927 K7EN84 100 aa17.52■□□□□ 0.4
PTX3-201ENST00000295927 TCRAP04437 139 aa17.52■□□□□ 0.4
PTX3-201ENST00000295927 ATF4P18848 351 aaPredicted RBP17.52■□□□□ 0.4
PTX3-201ENST00000295927 GPR82Q96P67 336 aa17.52■□□□□ 0.4
PTX3-201ENST00000295927 CMTM2Q8TAZ6 248 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms