RNA–Protein interactions for RNA: ENST00000261965.7

TUBGCP3-201, Transcript of tubulin gamma complex associated protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBGCP3, Length 3,899 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP3-201ENST00000261965 PRO3102Q9H379 93 aa11.32□□□□□ -0.6
TUBGCP3-201ENST00000261965 PLSCR4Q9NRQ2 329 aa11.32□□□□□ -0.6
TUBGCP3-201ENST00000261965 A6NDN8 102 aa11.31□□□□□ -0.6
TUBGCP3-201ENST00000261965 NPIPB5A8MRT5 1133 aa11.31□□□□□ -0.6
TUBGCP3-201ENST00000261965 H7C2G1 150 aa11.31□□□□□ -0.6
TUBGCP3-201ENST00000261965 S100A4P26447 101 aaKnown RBP11.31□□□□□ -0.6
TUBGCP3-201ENST00000261965 CFHR2P36980 270 aa11.31□□□□□ -0.6
TUBGCP3-201ENST00000261965 SMAGPQ0VAQ4 97 aa11.31□□□□□ -0.6
TUBGCP3-201ENST00000261965 USP9YO00507 2555 aaPredicted RBP11.31□□□□□ -0.6
TUBGCP3-201ENST00000261965 GLRXP35754 106 aa11.31□□□□□ -0.6
TUBGCP3-201ENST00000261965 PSG9Q00887 426 aa11.31□□□□□ -0.6
TUBGCP3-201ENST00000261965 ECSCRQ19T08 205 aa11.31□□□□□ -0.6
TUBGCP3-201ENST00000261965 C2orf83Q53S99 150 aa11.31□□□□□ -0.6
TUBGCP3-201ENST00000261965 PRSS46E5RG02 174 aa11.31□□□□□ -0.6
TUBGCP3-201ENST00000261965 SAP30O75446 220 aa11.31□□□□□ -0.6
TUBGCP3-201ENST00000261965 RNASE2P10153 161 aaKnown RBP11.31□□□□□ -0.6
TUBGCP3-201ENST00000261965 RBPMS2Q6ZRY4 209 aaKnown RBP11.31□□□□□ -0.6
TUBGCP3-201ENST00000261965 CST9LQ9H4G1 147 aa11.31□□□□□ -0.6
TUBGCP3-201ENST00000261965 TMEM14BQ9NUH8 114 aa11.31□□□□□ -0.6
TUBGCP3-201ENST00000261965 SPCS1Q9Y6A9 102 aa11.31□□□□□ -0.6
TUBGCP3-201ENST00000261965 SELENOTP62341 195 aa11.3□□□□□ -0.6
TUBGCP3-201ENST00000261965 TIMM23BQ5SRD1 257 aa11.3□□□□□ -0.6
TUBGCP3-201ENST00000261965 GFRALQ6UXV0 394 aa11.3□□□□□ -0.6
TUBGCP3-201ENST00000261965 ZNF503Q96F45 646 aa11.3□□□□□ -0.6
TUBGCP3-201ENST00000261965 PEF1Q9UBV8 284 aaKnown RBP11.3□□□□□ -0.6
TUBGCP3-201ENST00000261965 F2RL2O00254 374 aa11.3□□□□□ -0.6
TUBGCP3-201ENST00000261965 IGHG3P01860 377 aa11.3□□□□□ -0.6
TUBGCP3-201ENST00000261965 SAPCD1Q5SSQ6 148 aa11.3□□□□□ -0.6
TUBGCP3-201ENST00000261965 ZNF414Q96IQ9 312 aa11.3□□□□□ -0.6
TUBGCP3-201ENST00000261965 TTTY13Q9BZ97 58 aa11.3□□□□□ -0.6
TUBGCP3-201ENST00000261965 NHP2Q9NX24 153 aaKnown RBP11.3□□□□□ -0.6
TUBGCP3-201ENST00000261965 ZNF257Q9Y2Q1 563 aa11.3□□□□□ -0.6
TUBGCP3-201ENST00000261965 LOC107984156A0A0G2JMH3 177 aa11.3□□□□□ -0.6
TUBGCP3-201ENST00000261965 ARL17AQ8IVW1 177 aa11.3□□□□□ -0.6
TUBGCP3-201ENST00000261965 STXBP6Q8NFX7 210 aa11.3□□□□□ -0.6
TUBGCP3-201ENST00000261965 PRELID3AQ96N28 172 aa11.3□□□□□ -0.6
TUBGCP3-201ENST00000261965 GAFA1Q96PS6 74 aa11.3□□□□□ -0.6
TUBGCP3-201ENST00000261965 A1L4Q6 167 aa11.29□□□□□ -0.6
TUBGCP3-201ENST00000261965 H3BVH4 76 aa11.29□□□□□ -0.6
TUBGCP3-201ENST00000261965 IFI27P40305 119 aaPredicted RBP11.29□□□□□ -0.6
TUBGCP3-201ENST00000261965 WT1-ASQ06250 92 aa11.29□□□□□ -0.6
TUBGCP3-201ENST00000261965 AMN1Q8IY45 258 aa11.29□□□□□ -0.6
TUBGCP3-201ENST00000261965 MYO18BQ8IUG5 2567 aa11.29□□□□□ -0.6
TUBGCP3-201ENST00000261965 CCDC168Q8NDH2 2452 aa11.29□□□□□ -0.6
TUBGCP3-201ENST00000261965 D6R8Y8 96 aa11.29□□□□□ -0.6
TUBGCP3-201ENST00000261965 PRR20EP86478 221 aa11.29□□□□□ -0.6
TUBGCP3-201ENST00000261965 PRR20CP86479 221 aa11.29□□□□□ -0.6
TUBGCP3-201ENST00000261965 PRR20DP86480 221 aa11.29□□□□□ -0.6
TUBGCP3-201ENST00000261965 PRR20BP86481 221 aa11.29□□□□□ -0.6
TUBGCP3-201ENST00000261965 PRR20AP86496 221 aa11.29□□□□□ -0.6
TUBGCP3-201ENST00000261965 LYPD2Q6UXB3 125 aa11.29□□□□□ -0.6
TUBGCP3-201ENST00000261965 SCGB1D4Q6XE38 83 aa11.29□□□□□ -0.6
TUBGCP3-201ENST00000261965 GTSF1LQ9H1H1 148 aa11.29□□□□□ -0.6
TUBGCP3-201ENST00000261965 AKAP13Q12802 2813 aa11.29□□□□□ -0.6
TUBGCP3-201ENST00000261965 IGLV1-44P01699 117 aa11.29□□□□□ -0.6
TUBGCP3-201ENST00000261965 HTN1P15515 57 aa11.29□□□□□ -0.6
TUBGCP3-201ENST00000261965 DDB2Q92466 427 aa11.29□□□□□ -0.6
TUBGCP3-201ENST00000261965 C17orf77Q96MU5 243 aa11.29□□□□□ -0.6
TUBGCP3-201ENST00000261965 MRPL36Q9P0J6 103 aaKnown RBP11.29□□□□□ -0.6
TUBGCP3-201ENST00000261965 TCRBV4S1A1TA0A5B7 111 aa11.28□□□□□ -0.6
TUBGCP3-201ENST00000261965 TMEM213A2RRL7 107 aa11.28□□□□□ -0.6
TUBGCP3-201ENST00000261965 RELQ04864 619 aaPredicted RBP11.28□□□□□ -0.6
TUBGCP3-201ENST00000261965 PNKDQ8N490 385 aa11.28□□□□□ -0.6
TUBGCP3-201ENST00000261965 ZNF502Q8TBZ5 544 aa11.28□□□□□ -0.6
TUBGCP3-201ENST00000261965 IGHV1-69-2A0A0G2JMI3 117 aa11.28□□□□□ -0.6
TUBGCP3-201ENST00000261965 FABP2P12104 132 aa11.28□□□□□ -0.6
TUBGCP3-201ENST00000261965 TNRC6BQ9UPQ9 1833 aaKnown RBP11.28□□□□□ -0.6
TUBGCP3-201ENST00000261965 IGKV2-40A0A087WW87 121 aaPredicted RBP11.28□□□□□ -0.6
TUBGCP3-201ENST00000261965 IGHV1-24A0A0C4DH33 117 aa11.28□□□□□ -0.6
TUBGCP3-201ENST00000261965 FAM231BA6NCW3 169 aa11.28□□□□□ -0.6
TUBGCP3-201ENST00000261965 IGKV2D-40P01614 121 aaPredicted RBP11.28□□□□□ -0.6
TUBGCP3-201ENST00000261965 ZNF329Q86UD4 541 aa11.28□□□□□ -0.6
TUBGCP3-201ENST00000261965 FAM169BQ8N8A8 192 aa11.28□□□□□ -0.6
TUBGCP3-201ENST00000261965 C1orf162Q8NEQ5 155 aaPredicted RBP11.28□□□□□ -0.6
TUBGCP3-201ENST00000261965 NDFIP1Q9BT67 221 aa11.28□□□□□ -0.6
TUBGCP3-201ENST00000261965 MRPL32Q9BYC8 188 aaKnown RBP11.28□□□□□ -0.6
TUBGCP3-201ENST00000261965 NDUFB8O95169 186 aa11.27□□□□□ -0.6
TUBGCP3-201ENST00000261965 OCIAD2Q56VL3 154 aa11.27□□□□□ -0.6
TUBGCP3-201ENST00000261965 ORAOV1Q8WV07 137 aa11.27□□□□□ -0.6
TUBGCP3-201ENST00000261965 NEUROG1Q92886 237 aa11.27□□□□□ -0.6
TUBGCP3-201ENST00000261965 RITA1Q96K30 269 aa11.27□□□□□ -0.6
TUBGCP3-201ENST00000261965 TMEM97Q5BJF2 176 aa11.27□□□□□ -0.61
TUBGCP3-201ENST00000261965 WFDC12Q8WWY7 111 aa11.27□□□□□ -0.61
TUBGCP3-201ENST00000261965 TMEM186Q96B77 213 aa11.27□□□□□ -0.61
TUBGCP3-201ENST00000261965 SPRY2O43597 315 aa11.27□□□□□ -0.61
TUBGCP3-201ENST00000261965 SLC25A2Q9BXI2 301 aa11.27□□□□□ -0.61
TUBGCP3-201ENST00000261965 TRAV9-1A0A075B6T8 112 aa11.26□□□□□ -0.61
TUBGCP3-201ENST00000261965 MGPP08493 103 aa11.26□□□□□ -0.61
TUBGCP3-201ENST00000261965 SCGB1C2P0DMR2 95 aa11.26□□□□□ -0.61
TUBGCP3-201ENST00000261965 RPL7P18124 248 aaKnown RBP11.26□□□□□ -0.61
TUBGCP3-201ENST00000261965 F5H697 171 aa11.26□□□□□ -0.61
TUBGCP3-201ENST00000261965 C16orf97H3BN30 126 aa11.26□□□□□ -0.61
TUBGCP3-201ENST00000261965 TMEM75Q8N9X5 138 aa11.26□□□□□ -0.61
TUBGCP3-201ENST00000261965 OSR1Q8TAX0 266 aaPredicted RBP11.26□□□□□ -0.61
TUBGCP3-201ENST00000261965 FOXC2Q99958 501 aa11.26□□□□□ -0.61
TUBGCP3-201ENST00000261965 SCNM1Q9BWG6 230 aa11.26□□□□□ -0.61
TUBGCP3-201ENST00000261965 FAM215AQ9Y5M1 114 aa11.26□□□□□ -0.61
TUBGCP3-201ENST00000261965 A0A1W2PPI3 338 aa11.26□□□□□ -0.61
TUBGCP3-201ENST00000261965 TCRAP04437 139 aa11.26□□□□□ -0.61
TUBGCP3-201ENST00000261965 GTSCR1Q86UQ5 136 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 113 ms