RNA–Protein interactions for RNA: ENSMUST00000054384.5

Trim56-201, Transcript of E3 ubiquitin-protein ligase TRIM56, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim56, Length 9,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56-201ENSMUST00000054384 Smim9Q3V0X1 137 aa10.4□□□□□ -0.75
Trim56-201ENSMUST00000054384 Ltbp3Q61810 1268 aa10.4□□□□□ -0.75
Trim56-201ENSMUST00000054384 Kcne3Q9WTW2 103 aa10.4□□□□□ -0.75
Trim56-201ENSMUST00000054384 Ighv14-4A0A0A6YVR1 117 aa10.39□□□□□ -0.75
Trim56-201ENSMUST00000054384 Adamtsl5D3Z689 485 aa10.39□□□□□ -0.75
Trim56-201ENSMUST00000054384 P01808 119 aa10.39□□□□□ -0.75
Trim56-201ENSMUST00000054384 Hoxb1P17919 297 aa10.39□□□□□ -0.75
Trim56-201ENSMUST00000054384 Gng4P50153 75 aa10.39□□□□□ -0.75
Trim56-201ENSMUST00000054384 RhovQ8VDU1 236 aa10.39□□□□□ -0.75
Trim56-201ENSMUST00000054384 Erv3Q9DAX3 200 aa10.39□□□□□ -0.75
Trim56-201ENSMUST00000054384 Fscn3Q9QXW4 498 aa10.39□□□□□ -0.75
Trim56-201ENSMUST00000054384 Pnliprp2P17892 482 aa10.39□□□□□ -0.75
Trim56-201ENSMUST00000054384 Cd226Q8K4F0 333 aa10.39□□□□□ -0.75
Trim56-201ENSMUST00000054384 Aqp3Q8R2N1 292 aa10.39□□□□□ -0.75
Trim56-201ENSMUST00000054384 Olfr490Q8VFD2 314 aa10.39□□□□□ -0.75
Trim56-201ENSMUST00000054384 Olfr123Q8VFQ1 309 aa10.39□□□□□ -0.75
Trim56-201ENSMUST00000054384 Mmp16Q9WTR0 607 aa10.39□□□□□ -0.75
Trim56-201ENSMUST00000054384 Smim13E9Q942 88 aa10.39□□□□□ -0.75
Trim56-201ENSMUST00000054384 Olfr1260Q8VGN9 310 aa10.39□□□□□ -0.75
Trim56-201ENSMUST00000054384 Igkv6-29A0A0G2JEI6 115 aa10.39□□□□□ -0.75
Trim56-201ENSMUST00000054384 Ccr6O54689 367 aa10.39□□□□□ -0.75
Trim56-201ENSMUST00000054384 Ubald1Q6P3B2 176 aa10.39□□□□□ -0.75
Trim56-201ENSMUST00000054384 Olfr1038Q8VGS1 319 aa10.39□□□□□ -0.75
Trim56-201ENSMUST00000054384 Gpr35Q9ES90 307 aa10.39□□□□□ -0.75
Trim56-201ENSMUST00000054384 Rnase4Q9JJH1 148 aa10.39□□□□□ -0.75
Trim56-201ENSMUST00000054384 Smlr1J3QMJ4 66 aa10.39□□□□□ -0.75
Trim56-201ENSMUST00000054384 Gm21874J3QNZ6 232 aa10.39□□□□□ -0.75
Trim56-201ENSMUST00000054384 RaxO35602 342 aa10.39□□□□□ -0.75
Trim56-201ENSMUST00000054384 Rps20P60867 119 aaKnown RBP10.39□□□□□ -0.75
Trim56-201ENSMUST00000054384 G430049J08RikQ3TL09 166 aa10.39□□□□□ -0.75
Trim56-201ENSMUST00000054384 Syngr3Q8R191 229 aa10.39□□□□□ -0.75
Trim56-201ENSMUST00000054384 Olfr1183Q8VFF8 303 aa10.39□□□□□ -0.75
Trim56-201ENSMUST00000054384 Igkv10-96A0A140T8M1 115 aa10.39□□□□□ -0.75
Trim56-201ENSMUST00000054384 Vmn1r233Q8R294 319 aa10.39□□□□□ -0.75
Trim56-201ENSMUST00000054384 Necap2Q9D1J1 266 aa10.39□□□□□ -0.75
Trim56-201ENSMUST00000054384 Zfp111Q9R164 701 aa10.39□□□□□ -0.75
Trim56-201ENSMUST00000054384 Igf2P09535 180 aa10.39□□□□□ -0.75
Trim56-201ENSMUST00000054384 Klk1b24Q61754 263 aa10.39□□□□□ -0.75
Trim56-201ENSMUST00000054384 DapQ91XC8 102 aa10.39□□□□□ -0.75
Trim56-201ENSMUST00000054384 SmpxQ9DC77 85 aa10.39□□□□□ -0.75
Trim56-201ENSMUST00000054384 Mettl26Q9DCS2 204 aa10.39□□□□□ -0.75
Trim56-201ENSMUST00000054384 Gpx2Q9JHC0 190 aa10.39□□□□□ -0.75
Trim56-201ENSMUST00000054384 Adh4Q9QYY9 377 aa10.39□□□□□ -0.75
Trim56-201ENSMUST00000054384 Tspoap1Q7TNF8 1846 aa10.38□□□□□ -0.75
Trim56-201ENSMUST00000054384 Gm10439A2AJU2 433 aaKnown RBP10.38□□□□□ -0.75
Trim56-201ENSMUST00000054384 Gm15114B1B0X6 433 aa10.38□□□□□ -0.75
Trim56-201ENSMUST00000054384 LalbaP29752 143 aa10.38□□□□□ -0.75
Trim56-201ENSMUST00000054384 Epha8O09127 1004 aa10.38□□□□□ -0.75
Trim56-201ENSMUST00000054384 Psmg4P0C7N9 123 aa10.38□□□□□ -0.75
Trim56-201ENSMUST00000054384 Gm10750Q3V0I0 133 aa10.38□□□□□ -0.75
Trim56-201ENSMUST00000054384 Lrfn4Q80XU8 636 aa10.38□□□□□ -0.75
Trim56-201ENSMUST00000054384 Pcgf1Q8R023 259 aaKnown RBP10.38□□□□□ -0.75
Trim56-201ENSMUST00000054384 Cdx2P43241 311 aa10.38□□□□□ -0.75
Trim56-201ENSMUST00000054384 Cd96Q3U0X8 602 aa10.38□□□□□ -0.75
Trim56-201ENSMUST00000054384 Ceacam11Q9D0Z8 303 aa10.38□□□□□ -0.75
Trim56-201ENSMUST00000054384 FcrlsQ9EQY5 509 aa10.38□□□□□ -0.75
Trim56-201ENSMUST00000054384 Ppp1r1aQ9ERT9 171 aa10.38□□□□□ -0.75
Trim56-201ENSMUST00000054384 PtprdQ64487 1912 aa10.38□□□□□ -0.75
Trim56-201ENSMUST00000054384 NrepQ07475 68 aa10.38□□□□□ -0.75
Trim56-201ENSMUST00000054384 Olfr874Q7TRE6 310 aa10.38□□□□□ -0.75
Trim56-201ENSMUST00000054384 Pef1Q8BFY6 275 aa10.38□□□□□ -0.75
Trim56-201ENSMUST00000054384 Flrt3Q8BGT1 649 aa10.38□□□□□ -0.75
Trim56-201ENSMUST00000054384 Tmem140Q8BGY5 185 aa10.38□□□□□ -0.75
Trim56-201ENSMUST00000054384 Srxn1Q9D975 136 aa10.38□□□□□ -0.75
Trim56-201ENSMUST00000054384 Tln2Q71LX4 2375 aa10.38□□□□□ -0.75
Trim56-201ENSMUST00000054384 BokO35425 213 aa10.38□□□□□ -0.75
Trim56-201ENSMUST00000054384 Acrv1P50289 261 aa10.38□□□□□ -0.75
Trim56-201ENSMUST00000054384 Lypd3Q91YK8 363 aa10.38□□□□□ -0.75
Trim56-201ENSMUST00000054384 TecrlQ8BFZ1 361 aa10.38□□□□□ -0.75
Trim56-201ENSMUST00000054384 Ovol2Q8CIV7 274 aa10.38□□□□□ -0.75
Trim56-201ENSMUST00000054384 Olfr354Q8VGJ8 317 aa10.38□□□□□ -0.75
Trim56-201ENSMUST00000054384 Akip1Q9JJR5 212 aa10.38□□□□□ -0.75
Trim56-201ENSMUST00000054384 LexmA2AVQ5 414 aa10.37□□□□□ -0.75
Trim56-201ENSMUST00000054384 Smim6Q3U0I6 56 aa10.37□□□□□ -0.75
Trim56-201ENSMUST00000054384 Dirc2Q8BFQ6 478 aa10.37□□□□□ -0.75
Trim56-201ENSMUST00000054384 Slc16a4Q8R0M8 500 aa10.37□□□□□ -0.75
Trim56-201ENSMUST00000054384 Q9DAF8 208 aa10.37□□□□□ -0.75
Trim56-201ENSMUST00000054384 Cyb561d1A2AE42 229 aa10.37□□□□□ -0.75
Trim56-201ENSMUST00000054384 Gsx1P31315 261 aa10.37□□□□□ -0.75
Trim56-201ENSMUST00000054384 Degs2Q8R2F2 323 aa10.37□□□□□ -0.75
Trim56-201ENSMUST00000054384 Ahctf1Q8CJF7 2243 aaKnown RBP10.37□□□□□ -0.75
Trim56-201ENSMUST00000054384 Wnt5bP22726 359 aa10.37□□□□□ -0.75
Trim56-201ENSMUST00000054384 FmodP50608 376 aa10.37□□□□□ -0.75
Trim56-201ENSMUST00000054384 C1qaP98086 245 aa10.37□□□□□ -0.75
Trim56-201ENSMUST00000054384 Arl14eplQ3UKZ7 152 aa10.37□□□□□ -0.75
Trim56-201ENSMUST00000054384 Foxj2Q9ES18 565 aa10.37□□□□□ -0.75
Trim56-201ENSMUST00000054384 SelenotP62342 195 aa10.37□□□□□ -0.75
Trim56-201ENSMUST00000054384 Tmprss13Q5U405 543 aa10.37□□□□□ -0.75
Trim56-201ENSMUST00000054384 CrhQ8CIT0 187 aa10.37□□□□□ -0.75
Trim56-201ENSMUST00000054384 Insig2Q91WG1 225 aa10.37□□□□□ -0.75
Trim56-201ENSMUST00000054384 NtmQ99PJ0 344 aa10.37□□□□□ -0.75
Trim56-201ENSMUST00000054384 Tnfrsf19Q9JLL3 416 aa10.37□□□□□ -0.75
Trim56-201ENSMUST00000054384 Cep250Q60952 2414 aa10.37□□□□□ -0.75
Trim56-201ENSMUST00000054384 Klk1b21Q61759 261 aa10.37□□□□□ -0.75
Trim56-201ENSMUST00000054384 Foxc2Q61850 494 aa10.37□□□□□ -0.75
Trim56-201ENSMUST00000054384 Dopey2Q3UHQ6 2295 aa10.37□□□□□ -0.75
Trim56-201ENSMUST00000054384 Ighv1-13A0A075B5I0 98 aa10.37□□□□□ -0.75
Trim56-201ENSMUST00000054384 Trdv2-2Q5R1A4 116 aa10.37□□□□□ -0.75
Trim56-201ENSMUST00000054384 Igfbp7Q61581 281 aa10.37□□□□□ -0.75
Trim56-201ENSMUST00000054384 Olfr1228Q8VGM9 323 aa10.37□□□□□ -0.75
Retrieved 100 of 22,080 RNA–protein pairs in 87.2 ms