RNA–Protein interactions for RNA: ENSMUST00000043767.8

Upf3a-201, Transcript of MCG3697, isoform CRA_c, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3a, Length 2,057 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3a-201ENSMUST00000043767 AdoQ6PDY2 256 aa18.88■□□□□ 0.61
Upf3a-201ENSMUST00000043767 Gm20738Q810R8 227 aa18.88■□□□□ 0.61
Upf3a-201ENSMUST00000043767 Rpp14Q9CQH8 122 aa18.88■□□□□ 0.61
Upf3a-201ENSMUST00000043767 Immp1lQ9CQU8 166 aa18.88■□□□□ 0.61
Upf3a-201ENSMUST00000043767 Tmem219Q9D123 240 aa18.88■□□□□ 0.61
Upf3a-201ENSMUST00000043767 9130008F23RikQ9D2Z6 181 aa18.88■□□□□ 0.61
Upf3a-201ENSMUST00000043767 Sh2d6Q9D413 297 aa18.88■□□□□ 0.61
Upf3a-201ENSMUST00000043767 Gm20806Q9D9T3 227 aa18.88■□□□□ 0.61
Upf3a-201ENSMUST00000043767 Muc2Q80Z19 2680 aa18.88■□□□□ 0.61
Upf3a-201ENSMUST00000043767 Col6a4A2AX52 2309 aa18.88■□□□□ 0.61
Upf3a-201ENSMUST00000043767 Gm5890A0A140LI04 305 aa18.88■□□□□ 0.61
Upf3a-201ENSMUST00000043767 Gm11565A2A4M7 156 aa18.88■□□□□ 0.61
Upf3a-201ENSMUST00000043767 BC048679D3YXE9 172 aa18.88■□□□□ 0.61
Upf3a-201ENSMUST00000043767 P01630 113 aa18.88■□□□□ 0.61
Upf3a-201ENSMUST00000043767 PrkacaP05132 351 aaKnown RBP18.88■□□□□ 0.61
Upf3a-201ENSMUST00000043767 Dvl1P51141 695 aa18.88■□□□□ 0.61
Upf3a-201ENSMUST00000043767 Cln6Q3U466 308 aa18.88■□□□□ 0.61
Upf3a-201ENSMUST00000043767 Olfr921Q7TRC0 313 aa18.88■□□□□ 0.61
Upf3a-201ENSMUST00000043767 Olfr1298Q8VGE6 312 aa18.88■□□□□ 0.61
Upf3a-201ENSMUST00000043767 Olfr638Q8VH20 321 aa18.88■□□□□ 0.61
Upf3a-201ENSMUST00000043767 Smim8Q9CQQ0 97 aa18.88■□□□□ 0.61
Upf3a-201ENSMUST00000043767 Rab1bQ9D1G1 201 aa18.88■□□□□ 0.61
Upf3a-201ENSMUST00000043767 Gm15127B1AVZ5 449 aa18.87■□□□□ 0.61
Upf3a-201ENSMUST00000043767 A930017K11RikE0CXQ2 571 aa18.87■□□□□ 0.61
Upf3a-201ENSMUST00000043767 Olfr555E9Q547 315 aa18.87■□□□□ 0.61
Upf3a-201ENSMUST00000043767 Defa-rs1P17533 116 aa18.87■□□□□ 0.61
Upf3a-201ENSMUST00000043767 Tnfrsf1aP25118 454 aa18.87■□□□□ 0.61
Upf3a-201ENSMUST00000043767 Rbm14Q8C2Q3 669 aaKnown RBP18.87■□□□□ 0.61
Upf3a-201ENSMUST00000043767 Rnf115Q9D0C1 305 aa18.87■□□□□ 0.61
Upf3a-201ENSMUST00000043767 Sp5Q9JHX2 398 aa18.87■□□□□ 0.61
Upf3a-201ENSMUST00000043767 Tep1P97499 2629 aa18.87■□□□□ 0.61
Upf3a-201ENSMUST00000043767 Gm10073E9Q3T0 114 aa18.86■□□□□ 0.61
Upf3a-201ENSMUST00000043767 Nkx2-1P50220 372 aa18.86■□□□□ 0.61
Upf3a-201ENSMUST00000043767 Gm813Q3UWK9 176 aa18.86■□□□□ 0.61
Upf3a-201ENSMUST00000043767 Clec4a1Q80UI7 245 aa18.86■□□□□ 0.61
Upf3a-201ENSMUST00000043767 Prss35Q8C0F9 409 aa18.86■□□□□ 0.61
Upf3a-201ENSMUST00000043767 Smim4Q8C1Q6 80 aa18.86■□□□□ 0.61
Upf3a-201ENSMUST00000043767 Stpg2Q8C8J0 561 aa18.86■□□□□ 0.61
Upf3a-201ENSMUST00000043767 Scnm1Q8K136 229 aa18.86■□□□□ 0.61
Upf3a-201ENSMUST00000043767 Olfr266Q8VFC3 316 aa18.86■□□□□ 0.61
Upf3a-201ENSMUST00000043767 Prss41Q920S2 322 aa18.86■□□□□ 0.61
Upf3a-201ENSMUST00000043767 Cd200r1Q9ES57 326 aa18.86■□□□□ 0.61
Upf3a-201ENSMUST00000043767 Sdk1Q3UH53 2193 aa18.86■□□□□ 0.61
Upf3a-201ENSMUST00000043767 Ighv1-47A0A0A6YY41 117 aa18.86■□□□□ 0.61
Upf3a-201ENSMUST00000043767 Rhox7aA2A4F1 281 aa18.86■□□□□ 0.61
Upf3a-201ENSMUST00000043767 RnlsA7RDN6 342 aa18.86■□□□□ 0.61
Upf3a-201ENSMUST00000043767 Gm2381G3UY53 305 aa18.86■□□□□ 0.61
Upf3a-201ENSMUST00000043767 Cd74P04441 279 aa18.86■□□□□ 0.61
Upf3a-201ENSMUST00000043767 Rbpms2Q8VC52 206 aaKnown RBP18.86■□□□□ 0.61
Upf3a-201ENSMUST00000043767 Cyyr1Q8VIH7 165 aa18.86■□□□□ 0.61
Upf3a-201ENSMUST00000043767 Gm9972E9Q053 102 aa18.85■□□□□ 0.61
Upf3a-201ENSMUST00000043767 Olfr204E9Q8M0 305 aa18.85■□□□□ 0.61
Upf3a-201ENSMUST00000043767 Iqcf6G3UWF2 157 aa18.85■□□□□ 0.61
Upf3a-201ENSMUST00000043767 Mrps26Q80ZS3 200 aa18.85■□□□□ 0.61
Upf3a-201ENSMUST00000043767 Olfr1170Q8VFG1 316 aa18.85■□□□□ 0.61
Upf3a-201ENSMUST00000043767 Ndufa2Q9CQ75 99 aa18.85■□□□□ 0.61
Upf3a-201ENSMUST00000043767 Psmb3Q9R1P1 205 aa18.85■□□□□ 0.61
Upf3a-201ENSMUST00000043767 Wisp2Q9Z0G4 251 aa18.85■□□□□ 0.61
Upf3a-201ENSMUST00000043767 Gm9195A0A140LHT4 2805 aa18.85■□□□□ 0.61
Upf3a-201ENSMUST00000043767 Ncoa6Q9JL19 2067 aa18.85■□□□□ 0.61
Upf3a-201ENSMUST00000043767 Olfr587-ps1A0A1B0GSS1 159 aa18.85■□□□□ 0.61
Upf3a-201ENSMUST00000043767 H2-M10.1O19443 331 aa18.85■□□□□ 0.61
Upf3a-201ENSMUST00000043767 CideaO70302 217 aa18.85■□□□□ 0.61
Upf3a-201ENSMUST00000043767 P01725 110 aa18.85■□□□□ 0.61
Upf3a-201ENSMUST00000043767 Igfbpl1Q80W15 270 aa18.85■□□□□ 0.61
Upf3a-201ENSMUST00000043767 Trav6d-5A0A075B6B9 112 aa18.84■□□□□ 0.61
Upf3a-201ENSMUST00000043767 Gm12790B1AUV6 201 aa18.84■□□□□ 0.61
Upf3a-201ENSMUST00000043767 Gm10665K7N6B7 321 aa18.84■□□□□ 0.61
Upf3a-201ENSMUST00000043767 Edn3P48299 214 aa18.84■□□□□ 0.61
Upf3a-201ENSMUST00000043767 Q3U595 105 aa18.84■□□□□ 0.61
Upf3a-201ENSMUST00000043767 Tmem40Q4FJU9 225 aa18.84■□□□□ 0.61
Upf3a-201ENSMUST00000043767 Olfr1290Q7TQX8 312 aa18.84■□□□□ 0.61
Upf3a-201ENSMUST00000043767 Lcn10Q810Z1 182 aa18.84■□□□□ 0.61
Upf3a-201ENSMUST00000043767 Olfr530Q8VFE8 307 aa18.84■□□□□ 0.61
Upf3a-201ENSMUST00000043767 Mrpl41Q9CQN7 135 aaKnown RBP18.84■□□□□ 0.61
Upf3a-201ENSMUST00000043767 LenepQ9WVB6 61 aa18.84■□□□□ 0.61
Upf3a-201ENSMUST00000043767 Ccl8Q9Z121 97 aa18.84■□□□□ 0.61
Upf3a-201ENSMUST00000043767 Dscaml1Q4VA61 2053 aa18.84■□□□□ 0.61
Upf3a-201ENSMUST00000043767 Cks2P56390 79 aa18.83■□□□□ 0.61
Upf3a-201ENSMUST00000043767 CortP56469 109 aa18.83■□□□□ 0.61
Upf3a-201ENSMUST00000043767 S100a3P62818 101 aa18.83■□□□□ 0.61
Upf3a-201ENSMUST00000043767 PjvkQ0ZLH2 352 aa18.83■□□□□ 0.61
Upf3a-201ENSMUST00000043767 Olfr1042Q7TR81 313 aa18.83■□□□□ 0.61
Upf3a-201ENSMUST00000043767 Olfr193Q7TS43 309 aa18.83■□□□□ 0.61
Upf3a-201ENSMUST00000043767 Rnf170Q8CBG9 286 aa18.83■□□□□ 0.61
Upf3a-201ENSMUST00000043767 Poc1aQ8JZX3 405 aa18.83■□□□□ 0.61
Upf3a-201ENSMUST00000043767 Olfr1368Q8VFG3 314 aa18.83■□□□□ 0.61
Upf3a-201ENSMUST00000043767 Olfr1257Q8VGP0 309 aa18.83■□□□□ 0.61
Upf3a-201ENSMUST00000043767 Olfr639Q8VGY8 316 aa18.83■□□□□ 0.61
Upf3a-201ENSMUST00000043767 Rnf126Q91YL2 313 aa18.83■□□□□ 0.61
Upf3a-201ENSMUST00000043767 Prr30Q9D9B7 401 aa18.83■□□□□ 0.61
Upf3a-201ENSMUST00000043767 Gm9970F6ZED4 185 aa18.83■□□□□ 0.6
Upf3a-201ENSMUST00000043767 Gsc2P56916 198 aa18.83■□□□□ 0.6
Upf3a-201ENSMUST00000043767 Prss45Q8K4I7 317 aa18.83■□□□□ 0.6
Upf3a-201ENSMUST00000043767 Q8VCE4 163 aa18.83■□□□□ 0.6
Upf3a-201ENSMUST00000043767 Olfr470Q8VF65 314 aa18.83■□□□□ 0.6
Upf3a-201ENSMUST00000043767 CrpP14847 225 aa18.82■□□□□ 0.6
Upf3a-201ENSMUST00000043767 FusP56959 518 aaKnown RBP18.82■□□□□ 0.6
Upf3a-201ENSMUST00000043767 Polr2gP62488 172 aa18.82■□□□□ 0.6
Upf3a-201ENSMUST00000043767 Znf575Q3TXZ1 239 aa18.82■□□□□ 0.6
Retrieved 100 of 22,080 RNA–protein pairs in 96.1 ms