RNA–Protein interactions for RNA: snR54

snR54, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR54, Length 86 nt, Biotype snoRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR54snR54 RPL7BQ12213 244 aaKnown RBP3.36□□□□□ -1.87
snR54snR54 AQY1P0CD91 305 aa3.35□□□□□ -1.87
snR54snR54 HOP1P20050 605 aa3.35□□□□□ -1.87
snR54snR54 HXT4P32467 576 aa3.35□□□□□ -1.87
snR54snR54 DHR2P36009 735 aaPredicted RBP3.35□□□□□ -1.87
snR54snR54 DID4P36108 232 aa3.35□□□□□ -1.87
snR54snR54 COQ6P53318 479 aa3.35□□□□□ -1.87
snR54snR54 SEC5P89102 971 aa3.35□□□□□ -1.87
snR54snR54 ARR3Q06598 404 aa3.35□□□□□ -1.87
snR54snR54 AIM41Q12032 185 aa3.35□□□□□ -1.87
snR54snR54 HEM1P09950 548 aaPredicted RBP3.34□□□□□ -1.87
snR54snR54 RNR3P21672 869 aaKnown RBP3.34□□□□□ -1.87
snR54snR54 ATP12P22135 325 aa3.34□□□□□ -1.87
snR54snR54 LRO1P40345 661 aa3.34□□□□□ -1.87
snR54snR54 YJL043WP47053 257 aa3.34□□□□□ -1.87
snR54snR54 ATP23P53722 227 aa3.34□□□□□ -1.87
snR54snR54 YDL073WQ07454 984 aa3.34□□□□□ -1.87
snR54snR54 RGT2Q12300 763 aa3.34□□□□□ -1.87
snR54snR54 DGR2P32330 852 aa3.33□□□□□ -1.88
snR54snR54 RMA1P36001 430 aaKnown RBP3.33□□□□□ -1.88
snR54snR54 YFL015CP43578 164 aa3.33□□□□□ -1.88
snR54snR54 SAP4P53036 818 aa3.33□□□□□ -1.88
snR54snR54 NGL1Q08213 363 aaKnown RBP3.33□□□□□ -1.88
snR54snR54 MRN1Q08925 612 aaKnown RBP RIP-Chip data3.33□□□□□ -1.88not detected
snR54snR54 NOP56Q12460 504 aaKnown RBP RIP-Chip data3.33□□□□□ -1.88not detected
snR54snR54 WHI2P12611 486 aa3.32□□□□□ -1.88
snR54snR54 CAP1P28495 268 aaKnown RBP3.32□□□□□ -1.88
snR54snR54 LOT5P34234 306 aa3.32□□□□□ -1.88
snR54snR54 YPT10P38146 199 aa3.32□□□□□ -1.88
snR54snR54 ULP2P40537 1034 aaPredicted RBP3.32□□□□□ -1.88
snR54snR54 RNR4P49723 345 aaKnown RBP3.32□□□□□ -1.88
snR54snR54 STP1Q00947 519 aa3.32□□□□□ -1.88
snR54snR54 ORM2Q06144 216 aa3.32□□□□□ -1.88
snR54snR54 PCK1P10963 549 aa3.31□□□□□ -1.88
snR54snR54 BEM3P32873 1128 aa3.31□□□□□ -1.88
snR54snR54 FPR3P38911 411 aaKnown RBP3.31□□□□□ -1.88
snR54snR54 PSA1P41940 361 aaKnown RBP3.31□□□□□ -1.88
snR54snR54 ENP2P48234 707 aaKnown RBP3.31□□□□□ -1.88
snR54snR54 SQS1P53866 767 aaKnown RBP3.31□□□□□ -1.88
snR54snR54 USA1Q03714 838 aa3.31□□□□□ -1.88
snR54snR54 PCL8Q08966 492 aa3.31□□□□□ -1.88
snR54snR54 TGS1Q12052 315 aa3.31□□□□□ -1.88
snR54snR54 YPR027CQ12079 277 aa3.31□□□□□ -1.88
snR54snR54 PRS5Q12265 496 aaKnown RBP3.31□□□□□ -1.88
snR54snR54 VPS33P20795 691 aa3.3□□□□□ -1.88
snR54snR54 MRPL9P31334 269 aa3.3□□□□□ -1.88
snR54snR54 RPC34P32910 317 aa3.3□□□□□ -1.88
snR54snR54 CCL1P37366 393 aa3.3□□□□□ -1.88
snR54snR54 BRN1P38170 754 aa3.3□□□□□ -1.88
snR54snR54 YJL193WP39542 402 aa3.3□□□□□ -1.88
snR54snR54 EXO1P39875 702 aa3.3□□□□□ -1.88
snR54snR54 BST1P43571 1029 aa3.3□□□□□ -1.88
snR54snR54 YEL076C-AP0CX16 216 aa3.29□□□□□ -1.88
snR54snR54 YLR464WP0CX17 216 aa3.29□□□□□ -1.88
snR54snR54 ECM32P32644 1121 aaKnown RBP3.29□□□□□ -1.88
snR54snR54 YEL076CP39971 216 aa3.29□□□□□ -1.88
snR54snR54 GPP2P40106 250 aaKnown RBP3.29□□□□□ -1.88
snR54snR54 PEF1P53238 335 aa3.29□□□□□ -1.88
snR54snR54 RSC9Q03124 581 aa3.29□□□□□ -1.88
snR54snR54 WAR1Q03631 944 aa3.29□□□□□ -1.88
snR54snR54 GEP3Q08622 556 aa3.29□□□□□ -1.88
snR54snR54 RMP1Q12530 201 aa3.29□□□□□ -1.88
snR54snR54 YMR084WA2P2R3 262 aa3.28□□□□□ -1.88
snR54snR54 DSS4P32601 143 aa3.28□□□□□ -1.88
snR54snR54 PEA2P40091 420 aa3.28□□□□□ -1.88
snR54snR54 IRC5P43610 853 aa3.28□□□□□ -1.88
snR54snR54 ATG36P46983 293 aa3.28□□□□□ -1.88
snR54snR54 MPS1P54199 764 aa3.28□□□□□ -1.88
snR54snR54 SKY1Q03656 742 aa3.28□□□□□ -1.88
snR54snR54 GFD1Q04839 188 aaKnown RBP3.28□□□□□ -1.88
snR54snR54 IRC3Q06683 689 aa3.28□□□□□ -1.88
snR54snR54 YPK1P12688 680 aaKnown RBP3.27□□□□□ -1.89
snR54snR54 GSY2P27472 705 aa3.27□□□□□ -1.89
snR54snR54 EAF5P39995 279 aa3.27□□□□□ -1.89
snR54snR54 TDA10P42938 290 aa3.27□□□□□ -1.89
snR54snR54 NMD5P46970 1048 aa3.27□□□□□ -1.89
snR54snR54 BPL1P48445 690 aaPredicted RBP3.27□□□□□ -1.89
snR54snR54 CIR2Q08822 631 aa3.27□□□□□ -1.89
snR54snR54 YOR378WQ08902 515 aa3.27□□□□□ -1.89
snR54snR54 YLR111WQ12528 110 aa3.27□□□□□ -1.89
snR54snR54 TUF1P02992 437 aaKnown RBP3.26□□□□□ -1.89
snR54snR54 AEP2P22136 580 aa3.26□□□□□ -1.89
snR54snR54 ARG1P22768 420 aa3.26□□□□□ -1.89
snR54snR54 APD1P38281 316 aa3.26□□□□□ -1.89
snR54snR54 SRP68P38687 599 aaKnown RBP3.26□□□□□ -1.89
snR54snR54 DUG1P43616 481 aaKnown RBP3.26□□□□□ -1.89
snR54snR54 MDR1P53258 950 aa3.26□□□□□ -1.89
snR54snR54 ECM38Q05902 660 aaPredicted RBP3.26□□□□□ -1.89
snR54snR54 BSP1Q06604 576 aa3.26□□□□□ -1.89
snR54snR54 CWC2Q12046 339 aaPredicted RBP3.26□□□□□ -1.89
snR54snR54 RDL1Q12305 139 aaKnown RBP3.26□□□□□ -1.89
snR54snR54 AAC1P04710 309 aa3.25□□□□□ -1.89
snR54snR54 BET2P20133 325 aa3.25□□□□□ -1.89
snR54snR54 URE2P23202 354 aaKnown RBP3.25□□□□□ -1.89
snR54snR54 YJU2P28320 278 aaPredicted RBP3.25□□□□□ -1.89
snR54snR54 EUG1P32474 517 aa3.25□□□□□ -1.89
snR54snR54 GDA1P32621 518 aa3.25□□□□□ -1.89
snR54snR54 OPT1P40897 799 aa3.25□□□□□ -1.89
snR54snR54 SNO3P43544 222 aa3.25□□□□□ -1.89
snR54snR54 SAE2P46946 345 aa3.25□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 79.8 ms