RNA–Protein interactions for RNA: YPR088C

SRP54, Transcript of Signal recognition particle (SRP) subunit (homolog of mammalian SRP54), yeastyeast

Gene SRP54, Length 1,626 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SRP54YPR088C BFA1P47113 574 aa8.63□□□□□ -1.03
SRP54YPR088C RFX1P48743 811 aa8.63□□□□□ -1.03
SRP54YPR088C MCM6P53091 1017 aaKnown RBP8.63□□□□□ -1.03
SRP54YPR088C KTR6P54070 446 aa8.63□□□□□ -1.03
SRP54YPR088C CEG1Q01159 459 aaPredicted RBP8.63□□□□□ -1.03
SRP54YPR088C MTD1Q02046 320 aaKnown RBP8.63□□□□□ -1.03
SRP54YPR088C PNP1Q05788 311 aa8.63□□□□□ -1.03
SRP54YPR088C CDC73Q06697 393 aa8.63□□□□□ -1.03
SRP54YPR088C AAD4Q07747 329 aa8.63□□□□□ -1.03
SRP54YPR088C ARP7Q12406 477 aa8.63□□□□□ -1.03
SRP54YPR088C RRD2Q12461 358 aa8.63□□□□□ -1.03
SRP54YPR088C AVL9Q12500 764 aa8.63□□□□□ -1.03
SRP54YPR088C PGS1P25578 521 aa8.62□□□□□ -1.03
SRP54YPR088C HXT3P32466 567 aaKnown RBP8.62□□□□□ -1.03
SRP54YPR088C TSA1P34760 196 aaKnown RBP8.62□□□□□ -1.03
SRP54YPR088C AIM18P38884 321 aa8.62□□□□□ -1.03
SRP54YPR088C CCT2P39076 527 aaKnown RBP8.62□□□□□ -1.03
SRP54YPR088C PRM9P39551 298 aa8.62□□□□□ -1.03
SRP54YPR088C RSM26P47141 266 aa8.62□□□□□ -1.03
SRP54YPR088C SHR3Q02774 210 aa8.62□□□□□ -1.03
SRP54YPR088C SPG3Q04398 127 aaPredicted RBP8.62□□□□□ -1.03
SRP54YPR088C SFH1Q06168 426 aa8.62□□□□□ -1.03
SRP54YPR088C FRA1Q07825 749 aa8.62□□□□□ -1.03
SRP54YPR088C YLL056CQ12177 298 aa8.62□□□□□ -1.03
SRP54YPR088C PAB1P04147 577 aaKnown RBP RIP-Chip data8.62□□□□□ -1.03not detected
SRP54YPR088C PYC1P11154 1178 aaKnown RBP8.62□□□□□ -1.03
SRP54YPR088C MSR1P38714 643 aa8.62□□□□□ -1.03
SRP54YPR088C RIM4P38741 713 aa8.62□□□□□ -1.03
SRP54YPR088C CKB2P38930 258 aa8.62□□□□□ -1.03
SRP54YPR088C SMX2P40204 77 aaKnown RBP8.62□□□□□ -1.03
SRP54YPR088C COG6P53959 839 aa8.62□□□□□ -1.03
SRP54YPR088C HEH2Q03281 663 aa8.62□□□□□ -1.03
SRP54YPR088C YMR027WQ04371 470 aa8.62□□□□□ -1.03
SRP54YPR088C ECM22Q05958 814 aaPredicted RBP8.62□□□□□ -1.03
SRP54YPR088C SAM3Q08986 587 aa8.62□□□□□ -1.03
SRP54YPR088C MNL2Q12205 849 aa8.62□□□□□ -1.03
SRP54YPR088C ARG4P04076 463 aaPredicted RBP8.61□□□□□ -1.03
SRP54YPR088C CMD1P06787 147 aaKnown RBP8.61□□□□□ -1.03
SRP54YPR088C HEM15P16622 393 aa8.61□□□□□ -1.03
SRP54YPR088C TPS2P31688 896 aaKnown RBP8.61□□□□□ -1.03
SRP54YPR088C FSH1P38777 243 aaKnown RBP8.61□□□□□ -1.03
SRP54YPR088C FMP10P40098 244 aa8.61□□□□□ -1.03
SRP54YPR088C MND2P40577 368 aa8.61□□□□□ -1.03
SRP54YPR088C RRT5P43607 289 aa8.61□□□□□ -1.03
SRP54YPR088C MNN11P46985 422 aaKnown RBP8.61□□□□□ -1.03
SRP54YPR088C URB2P47108 1174 aa8.61□□□□□ -1.03
SRP54YPR088C INA17Q02888 182 aa8.61□□□□□ -1.03
SRP54YPR088C PMT7Q06644 662 aa8.61□□□□□ -1.03
SRP54YPR088C OMS1Q06668 471 aa8.61□□□□□ -1.03
SRP54YPR088C GPM3Q12326 303 aa8.61□□□□□ -1.03
SRP54YPR088C QCR6P00127 147 aa8.6□□□□□ -1.03
SRP54YPR088C POL3P15436 1097 aa8.6□□□□□ -1.03
SRP54YPR088C IDI1P15496 288 aa8.6□□□□□ -1.03
SRP54YPR088C ILV6P25605 309 aaKnown RBP8.6□□□□□ -1.03
SRP54YPR088C YIH1P25637 258 aa8.6□□□□□ -1.03
SRP54YPR088C RAD5P32849 1169 aaPredicted RBP8.6□□□□□ -1.03
SRP54YPR088C HSP78P33416 811 aa8.6□□□□□ -1.03
SRP54YPR088C YKR051WP36142 418 aa8.6□□□□□ -1.03
SRP54YPR088C CDC27P38042 758 aa8.6□□□□□ -1.03
SRP54YPR088C YBR225WP38321 900 aa8.6□□□□□ -1.03
SRP54YPR088C BIT2P38346 545 aa8.6□□□□□ -1.03
SRP54YPR088C STL1P39932 569 aa8.6□□□□□ -1.03
SRP54YPR088C FAF1P40546 346 aaPredicted RBP8.6□□□□□ -1.03
SRP54YPR088C PXA1P41909 870 aa8.6□□□□□ -1.03
SRP54YPR088C YJR079WP47126 109 aa8.6□□□□□ -1.03
SRP54YPR088C PCL10P53124 433 aa8.6□□□□□ -1.03
SRP54YPR088C VPS9P54787 451 aa8.6□□□□□ -1.03
SRP54YPR088C MSH6Q03834 1242 aa8.6□□□□□ -1.03
SRP54YPR088C YOR223WQ12015 292 aa8.6□□□□□ -1.03
SRP54YPR088C IMA3P0CW40 589 aa8.59□□□□□ -1.03
SRP54YPR088C IMA4P0CW41 589 aa8.59□□□□□ -1.03
SRP54YPR088C DAL1P32375 460 aa8.59□□□□□ -1.03
SRP54YPR088C LAM1P38851 1228 aa8.59□□□□□ -1.03
SRP54YPR088C SCC4P40090 624 aa8.59□□□□□ -1.03
SRP54YPR088C YIR016WP40572 265 aa8.59□□□□□ -1.03
SRP54YPR088C SAE2P46946 345 aa8.59□□□□□ -1.03
SRP54YPR088C RTA1P53047 317 aa8.59□□□□□ -1.03
SRP54YPR088C NMA111P53920 997 aa8.59□□□□□ -1.03
SRP54YPR088C GCN5Q03330 439 aa8.59□□□□□ -1.03
SRP54YPR088C HER2Q03557 464 aa8.59□□□□□ -1.03
SRP54YPR088C USA1Q03714 838 aa8.59□□□□□ -1.03
SRP54YPR088C SPO71Q03868 1245 aa8.59□□□□□ -1.03
SRP54YPR088C IMA2Q08295 589 aa8.59□□□□□ -1.03
SRP54YPR088C EFG1Q3E705 233 aaKnown RBP8.59□□□□□ -1.03
SRP54YPR088C MET16P18408 261 aaPredicted RBP8.58□□□□□ -1.04
SRP54YPR088C MRPL25P23369 157 aa8.58□□□□□ -1.04
SRP54YPR088C MSH1P25846 959 aa8.58□□□□□ -1.04
SRP54YPR088C MAC1P35192 417 aa8.58□□□□□ -1.04
SRP54YPR088C YGR127WP53275 312 aa8.58□□□□□ -1.04
SRP54YPR088C COP1P53622 1201 aaKnown RBP8.58□□□□□ -1.04
SRP54YPR088C YNL144CP53907 740 aa8.58□□□□□ -1.04
SRP54YPR088C ARA2Q04212 335 aa8.58□□□□□ -1.04
SRP54YPR088C GRX8Q05926 109 aa8.58□□□□□ -1.04
SRP54YPR088C UTP13Q05946 817 aaKnown RBP8.58□□□□□ -1.04
SRP54YPR088C NRT1Q08485 598 aa8.58□□□□□ -1.04
SRP54YPR088C PUF2Q12221 1075 aaKnown RBP RIP-Chip data8.58□□□□□ -1.04not detected
SRP54YPR088C LCB4Q12246 624 aa8.58□□□□□ -1.04
SRP54YPR088C SVS1Q12254 260 aa8.58□□□□□ -1.04
SRP54YPR088C AI5_ALPHAQ9ZZX1 630 aa8.58□□□□□ -1.04
SRP54YPR088C OAF3P36023 863 aa8.58□□□□□ -1.04
Retrieved 100 of 5,963 RNA–protein pairs in 19.5 ms