RNA–Protein interactions for RNA: YPR047W

MSF1, Transcript of Mitochondrial phenylalanyl-tRNA synthetase, yeastyeast

Gene MSF1, Length 1,410 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSF1YPR047W CCR4P31384 837 aaKnown RBP10.67□□□□□ -0.7
MSF1YPR047W ABD1P32783 436 aaPredicted RBP10.67□□□□□ -0.7
MSF1YPR047W YJR061WP40355 935 aa10.67□□□□□ -0.7
MSF1YPR047W TMA108P40462 946 aa10.67□□□□□ -0.7
MSF1YPR047W TAN1P53072 289 aaPredicted RBP10.67□□□□□ -0.7
MSF1YPR047W PEX31P53203 462 aa10.67□□□□□ -0.7
MSF1YPR047W YGR283CP53336 341 aaPredicted RBP10.67□□□□□ -0.7
MSF1YPR047W SSL2Q00578 843 aa10.67□□□□□ -0.7
MSF1YPR047W YLR287CQ05881 355 aa10.67□□□□□ -0.7
MSF1YPR047W LCB5Q06147 687 aaKnown RBP10.67□□□□□ -0.7
MSF1YPR047W YRR1Q12172 810 aa10.67□□□□□ -0.7
MSF1YPR047W CUP1-1P0CX80 61 aa10.67□□□□□ -0.7
MSF1YPR047W CUP1-2P0CX81 61 aa10.67□□□□□ -0.7
MSF1YPR047W PYC2P32327 1180 aaKnown RBP10.67□□□□□ -0.7
MSF1YPR047W TFB1P32776 642 aa10.67□□□□□ -0.7
MSF1YPR047W SRX1P36077 127 aa10.67□□□□□ -0.7
MSF1YPR047W JNM1P36224 373 aa10.67□□□□□ -0.7
MSF1YPR047W LAM1P38851 1228 aa10.67□□□□□ -0.7
MSF1YPR047W BAT1P38891 393 aaKnown RBP10.67□□□□□ -0.7
MSF1YPR047W PRM9P39551 298 aa10.67□□□□□ -0.7
MSF1YPR047W TFG2P41896 400 aaPredicted RBP10.67□□□□□ -0.7
MSF1YPR047W NPY1P53164 384 aa10.67□□□□□ -0.7
MSF1YPR047W UME1Q03010 460 aa10.67□□□□□ -0.7
MSF1YPR047W SXM1Q04175 944 aaKnown RBP10.67□□□□□ -0.7
MSF1YPR047W YDR222WQ04925 415 aa10.67□□□□□ -0.7
MSF1YPR047W CIR2Q08822 631 aa10.67□□□□□ -0.7
MSF1YPR047W PYC1P11154 1178 aaKnown RBP10.66□□□□□ -0.7
MSF1YPR047W MET16P18408 261 aaPredicted RBP10.66□□□□□ -0.7
MSF1YPR047W CNN1P43618 361 aa10.66□□□□□ -0.7
MSF1YPR047W ELP3Q02908 557 aaKnown RBP10.66□□□□□ -0.7
MSF1YPR047W ARA2Q04212 335 aa10.66□□□□□ -0.7
MSF1YPR047W YDL129WQ07555 291 aa10.66□□□□□ -0.7
MSF1YPR047W PEX15Q08215 383 aa10.66□□□□□ -0.7
MSF1YPR047W HSF1P10961 833 aa10.65□□□□□ -0.7
MSF1YPR047W FSH1P38777 243 aaKnown RBP10.65□□□□□ -0.7
MSF1YPR047W FAA3P39002 694 aa10.65□□□□□ -0.7
MSF1YPR047W VAC8P39968 578 aa10.65□□□□□ -0.7
MSF1YPR047W EDC3P39998 551 aaKnown RBP10.65□□□□□ -0.7
MSF1YPR047W YGR111WP53265 400 aa10.65□□□□□ -0.7
MSF1YPR047W DOS2P54858 310 aa10.65□□□□□ -0.7
MSF1YPR047W RKM2Q03942 479 aa10.65□□□□□ -0.7
MSF1YPR047W HIS1P00498 297 aaKnown RBP10.64□□□□□ -0.71
MSF1YPR047W RML2P32611 393 aa10.64□□□□□ -0.71
MSF1YPR047W TYE7P33122 291 aaPredicted RBP10.64□□□□□ -0.71
MSF1YPR047W PXA2P34230 853 aa10.64□□□□□ -0.71
MSF1YPR047W YKL050CP35736 922 aa10.64□□□□□ -0.71
MSF1YPR047W MRPL40P36534 297 aa10.64□□□□□ -0.71
MSF1YPR047W YPT35P38815 214 aaKnown RBP10.64□□□□□ -0.71
MSF1YPR047W SMC2P38989 1170 aaKnown RBP10.64□□□□□ -0.71
MSF1YPR047W YIL054WP40524 105 aa10.64□□□□□ -0.71
MSF1YPR047W AIM23P47015 356 aa10.64□□□□□ -0.71
MSF1YPR047W YMR1P47147 688 aaKnown RBP RIP-Chip data10.64□□□□□ -0.71not detected
MSF1YPR047W INA17Q02888 182 aa10.64□□□□□ -0.71
MSF1YPR047W SND1Q04007 877 aa10.64□□□□□ -0.71
MSF1YPR047W YDL073WQ07454 984 aa10.64□□□□□ -0.71
MSF1YPR047W PER33Q12144 273 aa10.64□□□□□ -0.71
MSF1YPR047W NUM1Q00402 2748 aa10.64□□□□□ -0.71
MSF1YPR047W YPK1P12688 680 aaKnown RBP10.63□□□□□ -0.71
MSF1YPR047W DAL81P21657 970 aa10.63□□□□□ -0.71
MSF1YPR047W ADI1Q03677 179 aa10.63□□□□□ -0.71
MSF1YPR047W EAF1Q06337 982 aa10.63□□□□□ -0.71
MSF1YPR047W THI21Q08975 551 aa10.63□□□□□ -0.71
MSF1YPR047W RRP6Q12149 733 aaKnown RBP10.63□□□□□ -0.71
MSF1YPR047W SEC63P14906 663 aa10.62□□□□□ -0.71
MSF1YPR047W WSC4P38739 605 aa10.62□□□□□ -0.71
MSF1YPR047W TMN3P40071 706 aa10.62□□□□□ -0.71
MSF1YPR047W KTR7P40504 517 aa10.62□□□□□ -0.71
MSF1YPR047W SNG1P46950 547 aa10.62□□□□□ -0.71
MSF1YPR047W ERV41Q04651 352 aa10.62□□□□□ -0.71
MSF1YPR047W YLR046CQ12253 270 aa10.62□□□□□ -0.71
MSF1YPR047W ENO1P00924 437 aaKnown RBP10.61□□□□□ -0.71
MSF1YPR047W KAP104P38217 918 aaKnown RBP10.61□□□□□ -0.71
MSF1YPR047W SWC5P38326 303 aa10.61□□□□□ -0.71
MSF1YPR047W RTT107P38850 1070 aa10.61□□□□□ -0.71
MSF1YPR047W SAK1P38990 1142 aa10.61□□□□□ -0.71
MSF1YPR047W SER33P40510 469 aa10.61□□□□□ -0.71
MSF1YPR047W EMW1P42842 904 aaKnown RBP10.61□□□□□ -0.71
MSF1YPR047W COQ5P49017 307 aa10.61□□□□□ -0.71
MSF1YPR047W AMA1P50082 593 aa10.61□□□□□ -0.71
MSF1YPR047W YNR063WP53749 607 aa10.61□□□□□ -0.71
MSF1YPR047W AQR1P53943 586 aa10.61□□□□□ -0.71
MSF1YPR047W BET4Q00618 327 aa10.61□□□□□ -0.71
MSF1YPR047W YMR187CQ03236 431 aa10.61□□□□□ -0.71
MSF1YPR047W PHO13P19881 312 aa10.6□□□□□ -0.71
MSF1YPR047W GEX1P25596 615 aa10.6□□□□□ -0.71
MSF1YPR047W ADY2P25613 283 aa10.6□□□□□ -0.71
MSF1YPR047W SPC110P32380 944 aa10.6□□□□□ -0.71
MSF1YPR047W UTH1P36135 365 aa10.6□□□□□ -0.71
MSF1YPR047W GEX2P36173 615 aa10.6□□□□□ -0.71
MSF1YPR047W STL1P39932 569 aa10.6□□□□□ -0.71
MSF1YPR047W YNL108CP53929 270 aa10.6□□□□□ -0.71
MSF1YPR047W OPI10Q08202 246 aa10.6□□□□□ -0.71
MSF1YPR047W TRX1P22217 103 aaKnown RBP10.59□□□□□ -0.71
MSF1YPR047W ADD66P36040 267 aa10.59□□□□□ -0.71
MSF1YPR047W NCL1P38205 684 aaKnown RBP10.59□□□□□ -0.71
MSF1YPR047W SRP68P38687 599 aaKnown RBP10.59□□□□□ -0.71
MSF1YPR047W YHR078WP38799 552 aa10.59□□□□□ -0.71
MSF1YPR047W EAF7P53911 425 aaKnown RBP10.59□□□□□ -0.71
MSF1YPR047W PIR1Q03178 341 aa10.59□□□□□ -0.71
MSF1YPR047W GRX8Q05926 109 aa10.59□□□□□ -0.71
Retrieved 100 of 5,963 RNA–protein pairs in 16.5 ms