RNA–Protein interactions for RNA: YPL120W

VPS30, Transcript of Subunit of phosphatidylinositol (PtdIns) 3-kinase complexes I and II, yeast

Gene VPS30, Length 1,674 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VPS30	YPL120W	HCR1	Q05775	265 aa	Known RBP	4.11	□□□□□ -1.75
VPS30	YPL120W	YAP7	Q08182	245 aa		4.11	□□□□□ -1.75
VPS30	YPL120W	YBR182C-A	Q8TGU6	64 aa		4.11	□□□□□ -1.75
VPS30	YPL120W	BET2	P20133	325 aa		4.1	□□□□□ -1.75
VPS30	YPL120W	PDR3	P33200	976 aa		4.1	□□□□□ -1.75
VPS30	YPL120W	STB5	P38699	743 aa		4.1	□□□□□ -1.75
VPS30	YPL120W	OCA5	P38738	679 aa		4.1	□□□□□ -1.75
VPS30	YPL120W	SFB3	P38810	929 aa		4.1	□□□□□ -1.75
VPS30	YPL120W	CCT3	P39077	534 aa	Known RBP	4.1	□□□□□ -1.75
VPS30	YPL120W	RLP7	P40693	322 aa	Known RBP	4.1	□□□□□ -1.75
VPS30	YPL120W	YFH7	P43591	353 aa		4.1	□□□□□ -1.75
VPS30	YPL120W	ALG2	P43636	503 aa		4.1	□□□□□ -1.75
VPS30	YPL120W	MPP10	P47083	593 aa	Known RBP	4.1	□□□□□ -1.75
VPS30	YPL120W	SKY1	Q03656	742 aa		4.1	□□□□□ -1.75
VPS30	YPL120W	IRA1	P18963	3092 aa		4.1	□□□□□ -1.75
VPS30	YPL120W	TIM23	P32897	222 aa		4.1	□□□□□ -1.75
VPS30	YPL120W	CTR1	P49573	406 aa		4.1	□□□□□ -1.75
VPS30	YPL120W	PCL8	Q08966	492 aa		4.1	□□□□□ -1.75
VPS30	YPL120W	ICT1	Q12385	394 aa		4.1	□□□□□ -1.75
VPS30	YPL120W	YKL033W-A	Q86ZR7	236 aa		4.1	□□□□□ -1.75
VPS30	YPL120W	UTP20	P35194	2493 aa	Known RBP	4.09	□□□□□ -1.75
VPS30	YPL120W	PYC1	P11154	1178 aa	Known RBP	4.09	□□□□□ -1.76
VPS30	YPL120W	MBR1	P23493	339 aa		4.09	□□□□□ -1.76
VPS30	YPL120W	SRP40	P32583	406 aa	Predicted RBP	4.09	□□□□□ -1.76
VPS30	YPL120W	EMP70	P32802	667 aa		4.09	□□□□□ -1.76
VPS30	YPL120W	GLG1	P36143	616 aa		4.09	□□□□□ -1.76
VPS30	YPL120W	ARG2	P40360	574 aa		4.09	□□□□□ -1.76
VPS30	YPL120W	NOP2	P40991	618 aa	Known RBP	4.09	□□□□□ -1.76
VPS30	YPL120W	LAM4	P38800	1345 aa		4.09	□□□□□ -1.76
VPS30	YPL120W	PRP8	P33334	2413 aa	Known RBP	4.08	□□□□□ -1.76
VPS30	YPL120W	RPN13	O13563	156 aa		4.08	□□□□□ -1.76
VPS30	YPL120W	SIR3	P06701	978 aa		4.08	□□□□□ -1.76
VPS30	YPL120W	PUP3	P25451	205 aa	Known RBP	4.08	□□□□□ -1.76
VPS30	YPL120W	MVD1	P32377	396 aa	Known RBP	4.08	□□□□□ -1.76
VPS30	YPL120W	ECM1	P39715	212 aa		4.08	□□□□□ -1.76
VPS30	YPL120W	YEL020C	P39994	560 aa		4.08	□□□□□ -1.76
VPS30	YPL120W	PRP31	P49704	494 aa	Predicted RBP	4.08	□□□□□ -1.76
VPS30	YPL120W	PAN2	P53010	1115 aa	Predicted RBP	4.08	□□□□□ -1.76
VPS30	YPL120W	VPS72	Q03388	795 aa		4.08	□□□□□ -1.76
VPS30	YPL120W	CTK1	Q03957	528 aa	Known RBP	4.08	□□□□□ -1.76
VPS30	YPL120W	RPP0	P05317	312 aa	Known RBP	4.07	□□□□□ -1.76
VPS30	YPL120W	POX1	P13711	748 aa		4.07	□□□□□ -1.76
VPS30	YPL120W	MTL1	P53214	551 aa		4.07	□□□□□ -1.76
VPS30	YPL120W	PAP2	P53632	584 aa	Known RBP	4.07	□□□□□ -1.76
VPS30	YPL120W	YML037C	Q03703	340 aa		4.07	□□□□□ -1.76
VPS30	YPL120W	MMR1	Q06324	491 aa		4.07	□□□□□ -1.76
VPS30	YPL120W	SNA3	P14359	133 aa		4.06	□□□□□ -1.76
VPS30	YPL120W	BRN1	P38170	754 aa		4.06	□□□□□ -1.76
VPS30	YPL120W	BDH2	P39713	417 aa		4.06	□□□□□ -1.76
VPS30	YPL120W	FUN12	P39730	1002 aa	Known RBP	4.06	□□□□□ -1.76
VPS30	YPL120W	ALY2	P47029	1046 aa		4.06	□□□□□ -1.76
VPS30	YPL120W	NNF1	P47149	201 aa		4.06	□□□□□ -1.76
VPS30	YPL120W	GLO1	P50107	326 aa		4.06	□□□□□ -1.76
VPS30	YPL120W	ATP25	Q03153	612 aa		4.06	□□□□□ -1.76
VPS30	YPL120W	PIG1	Q06216	648 aa		4.06	□□□□□ -1.76
VPS30	YPL120W	MRI1	Q06489	411 aa	Known RBP	4.06	□□□□□ -1.76
VPS30	YPL120W	ACC1	Q00955	2233 aa	Known RBP	4.06	□□□□□ -1.76
VPS30	YPL120W	ORC2	P32833	620 aa		4.06	□□□□□ -1.76
VPS30	YPL120W	BET3	P36149	193 aa		4.06	□□□□□ -1.76
VPS30	YPL120W	FMO1	P38866	432 aa		4.06	□□□□□ -1.76
VPS30	YPL120W	YML053C	Q04978	212 aa		4.06	□□□□□ -1.76
VPS30	YPL120W	FLC1	Q08967	793 aa		4.06	□□□□□ -1.76
VPS30	YPL120W	TMT1	P32643	299 aa		4.05	□□□□□ -1.76
VPS30	YPL120W	TIF4631	P39935	952 aa	Known RBP	4.05	□□□□□ -1.76
VPS30	YPL120W	HXT16	P47185	567 aa		4.05	□□□□□ -1.76
VPS30	YPL120W	AZR1	P50080	613 aa		4.05	□□□□□ -1.76
VPS30	YPL120W	UBC9	P50623	157 aa	Predicted RBP	4.05	□□□□□ -1.76
VPS30	YPL120W	SEC5	P89102	971 aa		4.05	□□□□□ -1.76
VPS30	YPL120W	ISA1	Q07821	250 aa	Predicted RBP	4.05	□□□□□ -1.76
VPS30	YPL120W	RPT3	P33298	428 aa	Known RBP	4.04	□□□□□ -1.76
VPS30	YPL120W	SPC29	P33419	253 aa		4.04	□□□□□ -1.76
VPS30	YPL120W	NUP60	P39705	539 aa		4.04	□□□□□ -1.76
VPS30	YPL120W	ALD5	P40047	520 aa	Known RBP	4.04	□□□□□ -1.76
VPS30	YPL120W	GYL1	Q04322	720 aa		4.04	□□□□□ -1.76
VPS30	YPL120W	SNF3	P10870	884 aa		4.03	□□□□□ -1.76
VPS30	YPL120W	ADE2	P21264	571 aa	Known RBP	4.03	□□□□□ -1.76
VPS30	YPL120W	CCR4	P31384	837 aa	Known RBP	4.03	□□□□□ -1.76
VPS30	YPL120W	TRZ1	P36159	838 aa	Predicted RBP	4.03	□□□□□ -1.76
VPS30	YPL120W	APT2	P36973	181 aa		4.03	□□□□□ -1.76
VPS30	YPL120W	CST26	P38226	397 aa		4.03	□□□□□ -1.76
VPS30	YPL120W	YHR112C	P38716	378 aa		4.03	□□□□□ -1.76
VPS30	YPL120W	ATG4	P53867	494 aa		4.03	□□□□□ -1.76
VPS30	YPL120W	ORC4	P54791	529 aa		4.03	□□□□□ -1.76
VPS30	YPL120W	FKS1	P38631	1876 aa	Known RBP	4.03	□□□□□ -1.76
VPS30	YPL120W	HOM2	P13663	365 aa	Known RBP	4.03	□□□□□ -1.76
VPS30	YPL120W	FUB1	P25659	250 aa		4.03	□□□□□ -1.76
VPS30	YPL120W	UTR4	P32626	227 aa		4.03	□□□□□ -1.76
VPS30	YPL120W	PHO11	P35842	467 aa		4.03	□□□□□ -1.76
VPS30	YPL120W	UBS1	P38290	277 aa		4.03	□□□□□ -1.76
VPS30	YPL120W	PHO12	P38693	467 aa		4.03	□□□□□ -1.76
VPS30	YPL120W	YHR020W	P38708	688 aa	Known RBP	4.03	□□□□□ -1.76
VPS30	YPL120W	HRB1	P38922	454 aa	Known RBP RIP-Chip data	4.03	□□□□□ -1.76	not detected
VPS30	YPL120W	LYS9	P38999	446 aa		4.03	□□□□□ -1.76
VPS30	YPL120W	YNL050C	P53952	270 aa		4.03	□□□□□ -1.76
VPS30	YPL120W	GUD1	Q07729	489 aa		4.03	□□□□□ -1.76
VPS30	YPL120W	KRS1	P15180	591 aa	Known RBP	4.02	□□□□□ -1.77
VPS30	YPL120W	MCM4	P30665	933 aa	Known RBP	4.02	□□□□□ -1.77
VPS30	YPL120W	YKL097C	P34245	136 aa		4.02	□□□□□ -1.77
VPS30	YPL120W	MOB1	P40484	314 aa		4.02	□□□□□ -1.77
VPS30	YPL120W	FAF1	P40546	346 aa	Predicted RBP	4.02	□□□□□ -1.77

Retrieved 100 of 5,963 RNA–protein pairs in 16.1 ms