RNA–Protein interactions for RNA: YOL139C

CDC33, Transcript of mRNA cap binding protein and translation initiation factor eIF4E, yeast

Gene CDC33, Length 642 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CDC33	YOL139C	LRO1	P40345	661 aa		3.15	□□□□□ -1.91
CDC33	YOL139C	SNO3	P43544	222 aa		3.15	□□□□□ -1.91
CDC33	YOL139C	NMD5	P46970	1048 aa		3.15	□□□□□ -1.91
CDC33	YOL139C	PMT3	P47190	753 aa		3.15	□□□□□ -1.91
CDC33	YOL139C	BPL1	P48445	690 aa	Predicted RBP	3.15	□□□□□ -1.91
CDC33	YOL139C	RNH70	P53331	553 aa		3.15	□□□□□ -1.91
CDC33	YOL139C	YCG1	Q06680	1035 aa		3.15	□□□□□ -1.91
CDC33	YOL139C	EUG1	P32474	517 aa		3.14	□□□□□ -1.91
CDC33	YOL139C	MTC7	P32633	139 aa		3.14	□□□□□ -1.91
CDC33	YOL139C	TYS1	P36421	394 aa	Known RBP	3.14	□□□□□ -1.91
CDC33	YOL139C	CCL1	P37366	393 aa		3.14	□□□□□ -1.91
CDC33	YOL139C	TDA10	P42938	290 aa		3.14	□□□□□ -1.91
CDC33	YOL139C	HLJ1	P48353	224 aa		3.14	□□□□□ -1.91
CDC33	YOL139C	ATP23	P53722	227 aa		3.14	□□□□□ -1.91
CDC33	YOL139C	ERG13	P54839	491 aa	Known RBP	3.14	□□□□□ -1.91
CDC33	YOL139C	MTQ2	Q03920	221 aa	Predicted RBP	3.14	□□□□□ -1.91
CDC33	YOL139C	SPN1	Q06505	410 aa	Predicted RBP	3.14	□□□□□ -1.91
CDC33	YOL139C	ARR3	Q06598	404 aa		3.14	□□□□□ -1.91
CDC33	YOL139C	BSP1	Q06604	576 aa		3.14	□□□□□ -1.91
CDC33	YOL139C	THI73	Q07904	523 aa		3.14	□□□□□ -1.91
CDC33	YOL139C	CIR2	Q08822	631 aa		3.14	□□□□□ -1.91
CDC33	YOL139C	RPS21B	Q3E754	87 aa	Known RBP	3.14	□□□□□ -1.91
CDC33	YOL139C	CDC26	P14724	124 aa		3.13	□□□□□ -1.91
CDC33	YOL139C	ECM32	P32644	1121 aa	Known RBP	3.13	□□□□□ -1.91
CDC33	YOL139C	OAF1	P39720	1047 aa	Predicted RBP	3.13	□□□□□ -1.91
CDC33	YOL139C	RAD26	P40352	1085 aa		3.13	□□□□□ -1.91
CDC33	YOL139C	YDL183C	P48569	320 aa		3.13	□□□□□ -1.91
CDC33	YOL139C	SAP4	P53036	818 aa		3.13	□□□□□ -1.91
CDC33	YOL139C	TIM50	Q02776	476 aa		3.13	□□□□□ -1.91
CDC33	YOL139C	YHM2	Q04013	314 aa		3.13	□□□□□ -1.91
CDC33	YOL139C	HMG2	P12684	1045 aa		3.12	□□□□□ -1.91
CDC33	YOL139C	GLN4	P13188	809 aa	Known RBP	3.12	□□□□□ -1.91
CDC33	YOL139C	VPS33	P20795	691 aa		3.12	□□□□□ -1.91
CDC33	YOL139C	RNR3	P21672	869 aa	Known RBP	3.12	□□□□□ -1.91
CDC33	YOL139C	AEP2	P22136	580 aa		3.12	□□□□□ -1.91
CDC33	YOL139C	MRPL9	P31334	269 aa		3.12	□□□□□ -1.91
CDC33	YOL139C	YJL193W	P39542	402 aa		3.12	□□□□□ -1.91
CDC33	YOL139C	VID28	P40547	921 aa		3.12	□□□□□ -1.91
CDC33	YOL139C	STB2	P46679	850 aa		3.12	□□□□□ -1.91
CDC33	YOL139C	PEF1	P53238	335 aa		3.12	□□□□□ -1.91
CDC33	YOL139C	UME1	Q03010	460 aa		3.12	□□□□□ -1.91
CDC33	YOL139C	RDL1	Q12305	139 aa	Known RBP	3.12	□□□□□ -1.91
CDC33	YOL139C	ADR1	P07248	1323 aa		3.12	□□□□□ -1.91
CDC33	YOL139C	AAC1	P04710	309 aa		3.11	□□□□□ -1.91
CDC33	YOL139C	AQY1	P0CD91	305 aa		3.11	□□□□□ -1.91
CDC33	YOL139C	YPT10	P38146	199 aa		3.11	□□□□□ -1.91
CDC33	YOL139C	FPR3	P38911	411 aa	Known RBP	3.11	□□□□□ -1.91
CDC33	YOL139C	EXO1	P39875	702 aa		3.11	□□□□□ -1.91
CDC33	YOL139C	PCI8	P40512	444 aa		3.11	□□□□□ -1.91
CDC33	YOL139C	MNT3	P40549	630 aa		3.11	□□□□□ -1.91
CDC33	YOL139C	BST1	P43571	1029 aa		3.11	□□□□□ -1.91
CDC33	YOL139C	SCS3	P53012	380 aa		3.11	□□□□□ -1.91
CDC33	YOL139C	IDP3	P53982	420 aa	Known RBP	3.11	□□□□□ -1.91
CDC33	YOL139C	DNM1	P54861	757 aa		3.11	□□□□□ -1.91
CDC33	YOL139C	CRT10	Q08226	957 aa		3.11	□□□□□ -1.91
CDC33	YOL139C	GEP3	Q08622	556 aa		3.11	□□□□□ -1.91
CDC33	YOL139C	CBP3	P21560	335 aa		3.1	□□□□□ -1.91
CDC33	YOL139C	SRP68	P38687	599 aa	Known RBP	3.1	□□□□□ -1.91
CDC33	YOL139C	YHR033W	P38690	423 aa		3.1	□□□□□ -1.91
CDC33	YOL139C	RRP8	P38961	392 aa	Known RBP	3.1	□□□□□ -1.91
CDC33	YOL139C	YFL015C	P43578	164 aa		3.1	□□□□□ -1.91
CDC33	YOL139C	IRC8	P47046	822 aa		3.1	□□□□□ -1.91
CDC33	YOL139C	YJL043W	P47053	257 aa		3.1	□□□□□ -1.91
CDC33	YOL139C	YNL058C	P53947	316 aa		3.1	□□□□□ -1.91
CDC33	YOL139C	RSC9	Q03124	581 aa		3.1	□□□□□ -1.91
CDC33	YOL139C	FRE7	Q12333	620 aa		3.1	□□□□□ -1.91
CDC33	YOL139C	VPS5	Q92331	675 aa		3.1	□□□□□ -1.91
CDC33	YOL139C	DGR2	P32330	852 aa		3.09	□□□□□ -1.91
CDC33	YOL139C	ASK1	P35734	292 aa		3.09	□□□□□ -1.91
CDC33	YOL139C	FAT1	P38225	669 aa		3.09	□□□□□ -1.91
CDC33	YOL139C	RNR4	P49723	345 aa	Known RBP	3.09	□□□□□ -1.91
CDC33	YOL139C	WAR1	Q03631	944 aa		3.09	□□□□□ -1.91
CDC33	YOL139C	NOP56	Q12460	504 aa	Known RBP RIP-Chip data	3.09	□□□□□ -1.91	not detected
CDC33	YOL139C	YLR111W	Q12528	110 aa		3.09	□□□□□ -1.91
CDC33	YOL139C	RPS21A	P0C0V8	87 aa	Known RBP	3.08	□□□□□ -1.92
CDC33	YOL139C	SEC12	P11655	471 aa		3.08	□□□□□ -1.92
CDC33	YOL139C	CWH43	P25618	953 aa		3.08	□□□□□ -1.92
CDC33	YOL139C	EHT1	P38295	451 aa		3.08	□□□□□ -1.92
CDC33	YOL139C	JHD1	P40034	492 aa		3.08	□□□□□ -1.92
CDC33	YOL139C	GPP1	P41277	250 aa	Known RBP	3.08	□□□□□ -1.92
CDC33	YOL139C	DUG1	P43616	481 aa	Known RBP	3.08	□□□□□ -1.92
CDC33	YOL139C	GPG1	P53130	126 aa		3.08	□□□□□ -1.92
CDC33	YOL139C	YGL081W	P53156	320 aa		3.08	□□□□□ -1.92
CDC33	YOL139C	YNR029C	P53729	429 aa	Known RBP	3.08	□□□□□ -1.92
CDC33	YOL139C	SQS1	P53866	767 aa	Known RBP	3.08	□□□□□ -1.92
CDC33	YOL139C	MTD1	Q02046	320 aa	Known RBP	3.08	□□□□□ -1.92
CDC33	YOL139C	NUP145	P49687	1317 aa		3.08	□□□□□ -1.92
CDC33	YOL139C	URE2	P23202	354 aa	Known RBP	3.07	□□□□□ -1.92
CDC33	YOL139C	YJU2	P28320	278 aa	Predicted RBP	3.07	□□□□□ -1.92
CDC33	YOL139C	HXT4	P32467	576 aa		3.07	□□□□□ -1.92
CDC33	YOL139C	DSS4	P32601	143 aa		3.07	□□□□□ -1.92
CDC33	YOL139C	YIL092W	P40497	633 aa		3.07	□□□□□ -1.92
CDC33	YOL139C	SAE2	P46946	345 aa		3.07	□□□□□ -1.92
CDC33	YOL139C	SKY1	Q03656	742 aa		3.07	□□□□□ -1.92
CDC33	YOL139C	CRC1	Q12289	327 aa		3.07	□□□□□ -1.92
CDC33	YOL139C	YGR161W-C	Q3E744	92 aa		3.07	□□□□□ -1.92
CDC33	YOL139C	CET1	O13297	549 aa	Predicted RBP	3.06	□□□□□ -1.92
CDC33	YOL139C	BI2	P03873	423 aa		3.06	□□□□□ -1.92
CDC33	YOL139C	PRP45	P28004	379 aa	Predicted RBP	3.06	□□□□□ -1.92
CDC33	YOL139C	CDC5	P32562	705 aa		3.06	□□□□□ -1.92

Retrieved 100 of 5,963 RNA–protein pairs in 15.5 ms