RNA–Protein interactions for RNA: YNR006W

VPS27, Transcript of Endosomal protein that forms a complex with Hse1p, yeastyeast

Gene VPS27, Length 1,869 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS27YNR006W DUO1P53168 247 aaKnown RBP4.22□□□□□ -1.73
VPS27YNR006W YGR012WP53206 393 aa4.22□□□□□ -1.73
VPS27YNR006W ZDS2P54786 942 aa4.22□□□□□ -1.73
VPS27YNR006W ACS1Q01574 713 aa4.22□□□□□ -1.73
VPS27YNR006W TRI1Q05024 226 aa4.22□□□□□ -1.73
VPS27YNR006W CIR2Q08822 631 aa4.22□□□□□ -1.73
VPS27YNR006W VTS1Q08831 523 aaKnown RBP RIP-Chip data4.22□□□□□ -1.73not detected
VPS27YNR006W CYC1P00044 109 aaPredicted RBP4.22□□□□□ -1.73
VPS27YNR006W PFK2P16862 959 aaKnown RBP RIP-Chip data4.22□□□□□ -1.73not detected
VPS27YNR006W SAC6P32599 642 aaKnown RBP4.22□□□□□ -1.73
VPS27YNR006W MTC7P32633 139 aa4.22□□□□□ -1.73
VPS27YNR006W KHA1P40309 873 aa4.22□□□□□ -1.73
VPS27YNR006W PRM2P40534 656 aa4.22□□□□□ -1.73
VPS27YNR006W ENP2P48234 707 aaKnown RBP4.22□□□□□ -1.73
VPS27YNR006W IMA1P53051 589 aa4.22□□□□□ -1.73
VPS27YNR006W VPS75P53853 264 aa4.22□□□□□ -1.73
VPS27YNR006W PRP3Q03338 469 aaPredicted RBP4.22□□□□□ -1.73
VPS27YNR006W AAD4Q07747 329 aa4.22□□□□□ -1.73
VPS27YNR006W URA3P03962 267 aa4.21□□□□□ -1.74
VPS27YNR006W GAL10P04397 699 aa4.21□□□□□ -1.74
VPS27YNR006W HSF1P10961 833 aa4.21□□□□□ -1.74
VPS27YNR006W TEF4P36008 412 aaKnown RBP4.21□□□□□ -1.74
VPS27YNR006W ZRG8P40021 1076 aa4.21□□□□□ -1.74
VPS27YNR006W YIL108WP40483 696 aaKnown RBP4.21□□□□□ -1.74
VPS27YNR006W CTH1P47976 325 aa4.21□□□□□ -1.74
VPS27YNR006W EXG2P52911 562 aa4.21□□□□□ -1.74
VPS27YNR006W PUS2P53167 370 aa4.21□□□□□ -1.74
VPS27YNR006W BSC5P53755 489 aa4.21□□□□□ -1.74
VPS27YNR006W RTN2Q12443 393 aa4.21□□□□□ -1.74
VPS27YNR006W GCN4P03069 281 aa4.2□□□□□ -1.74
VPS27YNR006W CPA2P03965 1118 aaKnown RBP4.2□□□□□ -1.74
VPS27YNR006W DBF4P32325 704 aa4.2□□□□□ -1.74
VPS27YNR006W PUB1P32588 453 aaKnown RBP RIP-Chip data4.2□□□□□ -1.74not detected
VPS27YNR006W APN2P38207 520 aa4.2□□□□□ -1.74
VPS27YNR006W ETP1P38748 585 aaKnown RBP4.2□□□□□ -1.74
VPS27YNR006W GID8P40208 455 aa4.2□□□□□ -1.74
VPS27YNR006W YIL166CP40445 542 aa4.2□□□□□ -1.74
VPS27YNR006W SPO22P40511 975 aa4.2□□□□□ -1.74
VPS27YNR006W PEF1P53238 335 aa4.2□□□□□ -1.74
VPS27YNR006W YSA1Q01976 231 aa4.2□□□□□ -1.74
VPS27YNR006W RRP9Q06506 573 aaKnown RBP4.2□□□□□ -1.74
VPS27YNR006W ADY3Q07732 790 aa4.2□□□□□ -1.74
VPS27YNR006W YDL177CQ12257 170 aa4.2□□□□□ -1.74
VPS27YNR006W SFI1Q12369 946 aa4.2□□□□□ -1.74
VPS27YNR006W SUI3P09064 285 aaKnown RBP4.2□□□□□ -1.74
VPS27YNR006W BIK1P11709 440 aa4.2□□□□□ -1.74
VPS27YNR006W PMS1P14242 873 aa4.2□□□□□ -1.74
VPS27YNR006W ARG1P22768 420 aa4.2□□□□□ -1.74
VPS27YNR006W ARP2P32381 391 aaKnown RBP4.2□□□□□ -1.74
VPS27YNR006W LRG1P35688 1017 aa4.2□□□□□ -1.74
VPS27YNR006W RMA1P36001 430 aaKnown RBP4.2□□□□□ -1.74
VPS27YNR006W YJR061WP40355 935 aa4.2□□□□□ -1.74
VPS27YNR006W YJL068CP40363 299 aa4.2□□□□□ -1.74
VPS27YNR006W MND2P40577 368 aa4.2□□□□□ -1.74
VPS27YNR006W ARF3P40994 183 aaRIP-Chip data4.2□□□□□ -1.74 RIP-Chip
VPS27YNR006W BUD8P41698 603 aa4.2□□□□□ -1.74
VPS27YNR006W BST1P43571 1029 aa4.2□□□□□ -1.74
VPS27YNR006W FCP1Q03254 732 aa4.2□□□□□ -1.74
VPS27YNR006W ATG11Q12527 1178 aa4.2□□□□□ -1.74
VPS27YNR006W CWH43P25618 953 aa4.19□□□□□ -1.74
VPS27YNR006W YPT7P32939 208 aa4.19□□□□□ -1.74
VPS27YNR006W CNS1P33313 385 aa4.19□□□□□ -1.74
VPS27YNR006W YEL025CP39991 1188 aa4.19□□□□□ -1.74
VPS27YNR006W SSY5P47002 699 aa4.19□□□□□ -1.74
VPS27YNR006W MRX6P48564 524 aa4.19□□□□□ -1.74
VPS27YNR006W PLB2Q03674 706 aa4.19□□□□□ -1.74
VPS27YNR006W VTI1Q04338 217 aa4.19□□□□□ -1.74
VPS27YNR006W ISA1Q07821 250 aaPredicted RBP4.19□□□□□ -1.74
VPS27YNR006W COX17Q12287 69 aa4.19□□□□□ -1.74
VPS27YNR006W HSP42Q12329 375 aa4.19□□□□□ -1.74
VPS27YNR006W ZRT2Q12436 422 aa4.19□□□□□ -1.74
VPS27YNR006W MRP20P32387 263 aa4.18□□□□□ -1.74
VPS27YNR006W MRPL36P36531 177 aa4.18□□□□□ -1.74
VPS27YNR006W FSH1P38777 243 aaKnown RBP4.18□□□□□ -1.74
VPS27YNR006W PSD1P39006 500 aa4.18□□□□□ -1.74
VPS27YNR006W POP2P39008 433 aa4.18□□□□□ -1.74
VPS27YNR006W MAM1P40065 302 aa4.18□□□□□ -1.74
VPS27YNR006W SAE2P46946 345 aa4.18□□□□□ -1.74
VPS27YNR006W TAF4P50105 388 aa4.18□□□□□ -1.74
VPS27YNR006W PIL1P53252 339 aaKnown RBP4.18□□□□□ -1.74
VPS27YNR006W NGL3Q03210 505 aa4.18□□□□□ -1.74
VPS27YNR006W CRD1Q07560 283 aa4.18□□□□□ -1.74
VPS27YNR006W SKM1Q12469 655 aa4.18□□□□□ -1.74
VPS27YNR006W GLT1Q12680 2145 aaKnown RBP4.18□□□□□ -1.74
VPS27YNR006W SPE1P08432 466 aa4.18□□□□□ -1.74
VPS27YNR006W MAC1P35192 417 aa4.18□□□□□ -1.74
VPS27YNR006W YHR033WP38690 423 aa4.18□□□□□ -1.74
VPS27YNR006W RRF1P38771 230 aa4.18□□□□□ -1.74
VPS27YNR006W CTF8P38877 133 aa4.18□□□□□ -1.74
VPS27YNR006W UTP9P38882 575 aaKnown RBP4.18□□□□□ -1.74
VPS27YNR006W ARC1P46672 376 aaKnown RBP4.18□□□□□ -1.74
VPS27YNR006W DSD1P53095 428 aa4.18□□□□□ -1.74
VPS27YNR006W RMT2Q03305 412 aa4.18□□□□□ -1.74
VPS27YNR006W ICL2Q12031 575 aa4.18□□□□□ -1.74
VPS27YNR006W SMF3Q12078 473 aaPredicted RBP4.18□□□□□ -1.74
VPS27YNR006W YOL159C-AQ3E769 90 aa4.18□□□□□ -1.74
VPS27YNR006W TUB2P02557 457 aaKnown RBP4.17□□□□□ -1.74
VPS27YNR006W RPB2P08518 1224 aaKnown RBP4.17□□□□□ -1.74
VPS27YNR006W FRS1P15624 595 aaKnown RBP4.17□□□□□ -1.74
VPS27YNR006W PRP22P24384 1145 aaKnown RBP4.17□□□□□ -1.74
Retrieved 100 of 5,963 RNA–protein pairs in 9.2 ms