RNA–Protein interactions for RNA: YNL335W

DDI3, Transcript of Protein of unknown function, yeast

Gene DDI3, Length 678 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DDI3	YNL335W	RRP8	P38961	392 aa	Known RBP	5.03	□□□□□ -1.6
DDI3	YNL335W	YJL206C	P39529	758 aa		5.03	□□□□□ -1.6
DDI3	YNL335W	YJL193W	P39542	402 aa		5.03	□□□□□ -1.6
DDI3	YNL335W	BDH2	P39713	417 aa		5.03	□□□□□ -1.6
DDI3	YNL335W	LRO1	P40345	661 aa		5.03	□□□□□ -1.6
DDI3	YNL335W	NMA2	P53204	395 aa		5.03	□□□□□ -1.6
DDI3	YNL335W	PAP2	P53632	584 aa	Known RBP	5.03	□□□□□ -1.6
DDI3	YNL335W	UBX4	P54730	416 aa		5.03	□□□□□ -1.6
DDI3	YNL335W	UFO1	Q04511	668 aa		5.03	□□□□□ -1.6
DDI3	YNL335W	BMS1	Q08965	1183 aa	Known RBP	5.03	□□□□□ -1.6
DDI3	YNL335W	DIN7	Q12086	430 aa		5.03	□□□□□ -1.6
DDI3	YNL335W	DBP10	Q12389	995 aa	Known RBP	5.03	□□□□□ -1.6
DDI3	YNL335W	ADH4	P10127	382 aa		5.02	□□□□□ -1.61
DDI3	YNL335W	VPS33	P20795	691 aa		5.02	□□□□□ -1.61
DDI3	YNL335W	KIN3	P22209	435 aa		5.02	□□□□□ -1.61
DDI3	YNL335W	SWD1	P39706	426 aa		5.02	□□□□□ -1.61
DDI3	YNL335W	THI6	P41835	540 aa		5.02	□□□□□ -1.61
DDI3	YNL335W	QRI7	P43122	407 aa		5.02	□□□□□ -1.61
DDI3	YNL335W	TEP1	P53916	434 aa		5.02	□□□□□ -1.61
DDI3	YNL335W	DAK1	P54838	584 aa	Known RBP	5.02	□□□□□ -1.61
DDI3	YNL335W	PCK1	P10963	549 aa		5.01	□□□□□ -1.61
DDI3	YNL335W	DMC1	P25453	334 aa		5.01	□□□□□ -1.61
DDI3	YNL335W	MRPL7	P36519	292 aa		5.01	□□□□□ -1.61
DDI3	YNL335W	YLF2	P38746	405 aa		5.01	□□□□□ -1.61
DDI3	YNL335W	GND2	P53319	492 aa		5.01	□□□□□ -1.61
DDI3	YNL335W	SPC98	P53540	846 aa		5.01	□□□□□ -1.61
DDI3	YNL335W	EFR3	Q03653	782 aa	Known RBP	5.01	□□□□□ -1.61
DDI3	YNL335W	TMN2	Q04562	672 aa		5.01	□□□□□ -1.61
DDI3	YNL335W	ARR3	Q06598	404 aa		5.01	□□□□□ -1.61
DDI3	YNL335W	LAM4	P38800	1345 aa		5	□□□□□ -1.61
DDI3	YNL335W	PHO81	P17442	1178 aa		5	□□□□□ -1.61
DDI3	YNL335W	CAP1	P28495	268 aa	Known RBP	5	□□□□□ -1.61
DDI3	YNL335W	MTH1	P35198	433 aa		5	□□□□□ -1.61
DDI3	YNL335W	UBS1	P38290	277 aa		5	□□□□□ -1.61
DDI3	YNL335W	YHL041W	P38730	149 aa		5	□□□□□ -1.61
DDI3	YNL335W	VPS27	P40343	622 aa	Known RBP	5	□□□□□ -1.61
DDI3	YNL335W	IMA5	P40884	581 aa		5	□□□□□ -1.61
DDI3	YNL335W	SNF12	P53628	566 aa		5	□□□□□ -1.61
DDI3	YNL335W	MFM1	Q02783	413 aa		5	□□□□□ -1.61
DDI3	YNL335W	VMS1	Q04311	632 aa	Known RBP	5	□□□□□ -1.61
DDI3	YNL335W	MRH1	Q12117	320 aa	Predicted RBP	5	□□□□□ -1.61
DDI3	YNL335W	TAF3	Q12297	353 aa		5	□□□□□ -1.61
DDI3	YNL335W	MSS18	P08593	268 aa		4.99	□□□□□ -1.61
DDI3	YNL335W	PGI1	P12709	554 aa	Known RBP	4.99	□□□□□ -1.61
DDI3	YNL335W	MSH1	P25846	959 aa		4.99	□□□□□ -1.61
DDI3	YNL335W	DSS4	P32601	143 aa		4.99	□□□□□ -1.61
DDI3	YNL335W	PMT6	P42934	759 aa		4.99	□□□□□ -1.61
DDI3	YNL335W	CCT7	P42943	550 aa	Known RBP	4.99	□□□□□ -1.61
DDI3	YNL335W	GSM1	P42950	618 aa		4.99	□□□□□ -1.61
DDI3	YNL335W	MAD3	P47074	515 aa		4.99	□□□□□ -1.61
DDI3	YNL335W	NGL2	Q03264	515 aa	Known RBP	4.99	□□□□□ -1.61
DDI3	YNL335W	HIM1	Q06674	414 aa		4.99	□□□□□ -1.61
DDI3	YNL335W	BRE1	Q07457	700 aa	Known RBP	4.99	□□□□□ -1.61
DDI3	YNL335W	YPL216W	Q08964	1102 aa		4.99	□□□□□ -1.61
DDI3	YNL335W	PIF1	P07271	859 aa		4.98	□□□□□ -1.61
DDI3	YNL335W	APM3	P38153	483 aa		4.98	□□□□□ -1.61
DDI3	YNL335W	STU2	P46675	888 aa		4.98	□□□□□ -1.61
DDI3	YNL335W	TRS23	Q03784	219 aa		4.98	□□□□□ -1.61
DDI3	YNL335W	CRD1	Q07560	283 aa		4.98	□□□□□ -1.61
DDI3	YNL335W	GFA1	P14742	717 aa	Known RBP	4.97	□□□□□ -1.61
DDI3	YNL335W	PWP2	P25635	923 aa	Known RBP	4.97	□□□□□ -1.61
DDI3	YNL335W	VFA1	P40080	203 aa		4.97	□□□□□ -1.61
DDI3	YNL335W	YIP4	P53093	235 aa		4.97	□□□□□ -1.61
DDI3	YNL335W	YDR179W-A	Q03983	463 aa		4.97	□□□□□ -1.61
DDI3	YNL335W	HOF1	Q05080	669 aa		4.97	□□□□□ -1.61
DDI3	YNL335W	IRC10	Q08118	586 aa		4.97	□□□□□ -1.61
DDI3	YNL335W	MDM20	Q12387	796 aa	Known RBP	4.97	□□□□□ -1.61
DDI3	YNL335W	CTT1	P06115	562 aa		4.96	□□□□□ -1.62
DDI3	YNL335W	STE4	P18851	423 aa		4.96	□□□□□ -1.62
DDI3	YNL335W	BET2	P20133	325 aa		4.96	□□□□□ -1.62
DDI3	YNL335W	PTH2	P34222	208 aa		4.96	□□□□□ -1.62
DDI3	YNL335W	VPS24	P36095	224 aa	Known RBP	4.96	□□□□□ -1.62
DDI3	YNL335W	PIH1	P38768	344 aa		4.96	□□□□□ -1.62
DDI3	YNL335W	ATG16	Q03818	150 aa		4.96	□□□□□ -1.62
DDI3	YNL335W	AAD4	Q07747	329 aa		4.96	□□□□□ -1.62
DDI3	YNL335W	TGS1	Q12052	315 aa		4.96	□□□□□ -1.62
DDI3	YNL335W	PHO5	P00635	467 aa		4.95	□□□□□ -1.62
DDI3	YNL335W	SEC18	P18759	758 aa	Known RBP	4.95	□□□□□ -1.62
DDI3	YNL335W	VPS34	P22543	875 aa		4.95	□□□□□ -1.62
DDI3	YNL335W	LOT5	P34234	306 aa		4.95	□□□□□ -1.62
DDI3	YNL335W	STB5	P38699	743 aa		4.95	□□□□□ -1.62
DDI3	YNL335W	STT3	P39007	718 aa	Known RBP	4.95	□□□□□ -1.62
DDI3	YNL335W	ACA1	P39970	489 aa		4.95	□□□□□ -1.62
DDI3	YNL335W	BUD17	P53727	317 aa		4.95	□□□□□ -1.62
DDI3	YNL335W	MOT3	P54785	490 aa	Known RBP	4.95	□□□□□ -1.62
DDI3	YNL335W	ACS1	Q01574	713 aa		4.95	□□□□□ -1.62
DDI3	YNL335W	TRS31	Q03337	283 aa		4.95	□□□□□ -1.62
DDI3	YNL335W	ENT2	Q05785	613 aa		4.95	□□□□□ -1.62
DDI3	YNL335W	CNE1	P27825	502 aa		4.94	□□□□□ -1.62
DDI3	YNL335W	CCL1	P37366	393 aa		4.94	□□□□□ -1.62
DDI3	YNL335W	YMC2	P38087	329 aa		4.94	□□□□□ -1.62
DDI3	YNL335W	POL31	P46957	487 aa		4.94	□□□□□ -1.62
DDI3	YNL335W	IDS2	P46958	469 aa		4.94	□□□□□ -1.62
DDI3	YNL335W	COS12	P53053	380 aa		4.94	□□□□□ -1.62
DDI3	YNL335W	VPS73	P53142	486 aa	Known RBP	4.94	□□□□□ -1.62
DDI3	YNL335W	USA1	Q03714	838 aa		4.94	□□□□□ -1.62
DDI3	YNL335W	VPS64	Q03944	604 aa		4.94	□□□□□ -1.62
DDI3	YNL335W	YDL073W	Q07454	984 aa		4.94	□□□□□ -1.62
DDI3	YNL335W	MIS1	P09440	975 aa	Known RBP	4.93	□□□□□ -1.62
DDI3	YNL335W	POL3	P15436	1097 aa		4.93	□□□□□ -1.62

Retrieved 100 of 5,963 RNA–protein pairs in 11.1 ms