RNA–Protein interactions for RNA: YNL222W

SSU72, Transcript of Phosphatase and transcription/RNA-processing factor, yeastyeast

Gene SSU72, Length 621 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSU72YNL222W AAD3P25612 363 aa5.18□□□□□ -1.58
SSU72YNL222W CNE1P27825 502 aa5.18□□□□□ -1.58
SSU72YNL222W PEA2P40091 420 aa5.18□□□□□ -1.58
SSU72YNL222W RPS15Q01855 142 aaKnown RBP5.18□□□□□ -1.58
SSU72YNL222W ARR3Q06598 404 aa5.18□□□□□ -1.58
SSU72YNL222W TRE2Q08693 809 aa5.18□□□□□ -1.58
SSU72YNL222W TMA17Q12513 150 aa5.18□□□□□ -1.58
SSU72YNL222W YEL076C-AP0CX16 216 aa5.17□□□□□ -1.58
SSU72YNL222W YLR464WP0CX17 216 aa5.17□□□□□ -1.58
SSU72YNL222W YEL076CP39971 216 aa5.17□□□□□ -1.58
SSU72YNL222W YJR120WP47157 116 aa5.17□□□□□ -1.58
SSU72YNL222W YDL073WQ07454 984 aa5.17□□□□□ -1.58
SSU72YNL222W CPA2P03965 1118 aaKnown RBP5.16□□□□□ -1.58
SSU72YNL222W NUP1P20676 1076 aa5.16□□□□□ -1.58
SSU72YNL222W SRP68P38687 599 aaKnown RBP5.16□□□□□ -1.58
SSU72YNL222W IRC5P43610 853 aa5.16□□□□□ -1.58
SSU72YNL222W PIP2P52960 996 aa5.16□□□□□ -1.58
SSU72YNL222W SPC105P53148 917 aa5.16□□□□□ -1.58
SSU72YNL222W PEF1P53238 335 aa5.16□□□□□ -1.58
SSU72YNL222W YNL018CP53976 612 aa5.16□□□□□ -1.58
SSU72YNL222W HOF1Q05080 669 aa5.16□□□□□ -1.58
SSU72YNL222W AIM44Q99299 758 aa5.16□□□□□ -1.58
SSU72YNL222W COX11P19516 300 aaKnown RBP5.15□□□□□ -1.59
SSU72YNL222W PMA2P19657 947 aa5.15□□□□□ -1.59
SSU72YNL222W TSR4P25040 408 aa5.15□□□□□ -1.59
SSU72YNL222W CAP1P28495 268 aaKnown RBP5.15□□□□□ -1.59
SSU72YNL222W HOT13P36078 116 aa5.15□□□□□ -1.59
SSU72YNL222W YJL193WP39542 402 aa5.15□□□□□ -1.59
SSU72YNL222W EAF5P39995 279 aa5.15□□□□□ -1.59
SSU72YNL222W COQ6P53318 479 aa5.15□□□□□ -1.59
SSU72YNL222W SEG1Q04279 960 aa5.15□□□□□ -1.59
SSU72YNL222W CWC2Q12046 339 aaPredicted RBP5.15□□□□□ -1.59
SSU72YNL222W AI5_ALPHAQ9ZZX1 630 aa5.15□□□□□ -1.59
SSU72YNL222W RPL7AP05737 244 aaKnown RBP5.14□□□□□ -1.59
SSU72YNL222W PCK1P10963 549 aa5.14□□□□□ -1.59
SSU72YNL222W VPS33P20795 691 aa5.14□□□□□ -1.59
SSU72YNL222W YBR071WP38243 211 aa5.14□□□□□ -1.59
SSU72YNL222W MTD1Q02046 320 aaKnown RBP5.14□□□□□ -1.59
SSU72YNL222W ECM38Q05902 660 aaPredicted RBP5.14□□□□□ -1.59
SSU72YNL222W YOR378WQ08902 515 aa5.14□□□□□ -1.59
SSU72YNL222W RPL7BQ12213 244 aaKnown RBP5.14□□□□□ -1.59
SSU72YNL222W LOT5P34234 306 aa5.13□□□□□ -1.59
SSU72YNL222W VPS5Q92331 675 aa5.13□□□□□ -1.59
SSU72YNL222W SEC3P33332 1336 aaKnown RBP5.13□□□□□ -1.59
SSU72YNL222W TUF1P02992 437 aaKnown RBP5.12□□□□□ -1.59
SSU72YNL222W HEM1P09950 548 aaPredicted RBP5.12□□□□□ -1.59
SSU72YNL222W WHI2P12611 486 aa5.12□□□□□ -1.59
SSU72YNL222W RNR3P21672 869 aaKnown RBP5.12□□□□□ -1.59
SSU72YNL222W CCL1P37366 393 aa5.12□□□□□ -1.59
SSU72YNL222W SAP4P53036 818 aa5.12□□□□□ -1.59
SSU72YNL222W MNT2P53059 558 aa5.12□□□□□ -1.59
SSU72YNL222W MDR1P53258 950 aa5.12□□□□□ -1.59
SSU72YNL222W COG6P53959 839 aa5.12□□□□□ -1.59
SSU72YNL222W AFT2Q08957 416 aa5.12□□□□□ -1.59
SSU72YNL222W TGS1Q12052 315 aa5.12□□□□□ -1.59
SSU72YNL222W PGK1P00560 416 aaKnown RBP5.11□□□□□ -1.59
SSU72YNL222W MBR1P23493 339 aa5.11□□□□□ -1.59
SSU72YNL222W DSS4P32601 143 aa5.11□□□□□ -1.59
SSU72YNL222W ENP1P38333 483 aaKnown RBP5.11□□□□□ -1.59
SSU72YNL222W YFL015CP43578 164 aa5.11□□□□□ -1.59
SSU72YNL222W SLD3P53135 668 aa5.11□□□□□ -1.59
SSU72YNL222W USA1Q03714 838 aa5.11□□□□□ -1.59
SSU72YNL222W AQY1P0CD91 305 aa5.1□□□□□ -1.59
SSU72YNL222W SEC12P11655 471 aa5.1□□□□□ -1.59
SSU72YNL222W APN1P22936 367 aa5.1□□□□□ -1.59
SSU72YNL222W CWH43P25618 953 aa5.1□□□□□ -1.59
SSU72YNL222W HEM12P32347 362 aaPredicted RBP5.1□□□□□ -1.59
SSU72YNL222W TFC4P33339 1025 aa5.1□□□□□ -1.59
SSU72YNL222W YPT10P38146 199 aa5.1□□□□□ -1.59
SSU72YNL222W MRN1Q08925 612 aaKnown RBP RIP-Chip data5.1□□□□□ -1.59not detected
SSU72YNL222W KAR1P11927 433 aa5.09□□□□□ -1.59
SSU72YNL222W ARG1P22768 420 aa5.09□□□□□ -1.59
SSU72YNL222W XBP1P40489 647 aa5.09□□□□□ -1.59
SSU72YNL222W YJL043WP47053 257 aa5.09□□□□□ -1.59
SSU72YNL222W PEX15Q08215 383 aa5.09□□□□□ -1.59
SSU72YNL222W RTK1Q12100 620 aaPredicted RBP5.09□□□□□ -1.59
SSU72YNL222W ATG36P46983 293 aa5.08□□□□□ -1.6
SSU72YNL222W GFD1Q04839 188 aaKnown RBP5.08□□□□□ -1.6
SSU72YNL222W PCL8Q08966 492 aa5.08□□□□□ -1.6
SSU72YNL222W URA3P03962 267 aa5.07□□□□□ -1.6
SSU72YNL222W BET2P20133 325 aa5.07□□□□□ -1.6
SSU72YNL222W RPC34P32910 317 aa5.07□□□□□ -1.6
SSU72YNL222W STL1P39932 569 aa5.07□□□□□ -1.6
SSU72YNL222W EMP65P40085 556 aa5.07□□□□□ -1.6
SSU72YNL222W BNA3P47039 444 aaKnown RBP5.07□□□□□ -1.6
SSU72YNL222W HOL1P53389 586 aa5.07□□□□□ -1.6
SSU72YNL222W WAR1Q03631 944 aa5.07□□□□□ -1.6
SSU72YNL222W YPK1P12688 680 aaKnown RBP5.06□□□□□ -1.6
SSU72YNL222W PTP1P25044 335 aa5.06□□□□□ -1.6
SSU72YNL222W PLC1P32383 869 aa5.06□□□□□ -1.6
SSU72YNL222W MAD2P40958 196 aa5.06□□□□□ -1.6
SSU72YNL222W PEX14P53112 341 aa5.06□□□□□ -1.6
SSU72YNL222W ATP23P53722 227 aa5.06□□□□□ -1.6
SSU72YNL222W YNR071CP53757 342 aa5.06□□□□□ -1.6
SSU72YNL222W PHM6Q05637 104 aa5.06□□□□□ -1.6
SSU72YNL222W HOS1Q12214 470 aa5.06□□□□□ -1.6
SSU72YNL222W FRE7Q12333 620 aa5.06□□□□□ -1.6
SSU72YNL222W YMR084WA2P2R3 262 aa5.05□□□□□ -1.6
SSU72YNL222W MRPL9P31334 269 aa5.05□□□□□ -1.6
SSU72YNL222W STB5P38699 743 aa5.05□□□□□ -1.6
Retrieved 100 of 5,963 RNA–protein pairs in 140.4 ms