RNA–Protein interactions for RNA: YNL189W

SRP1, Transcript of Karyopherin alpha homolog, yeastyeast

Gene SRP1, Length 1,629 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SRP1YNL189W PET309P32522 965 aaPredicted RBP3.95□□□□□ -1.78
SRP1YNL189W YKL133CP36066 463 aa3.95□□□□□ -1.78
SRP1YNL189W GLG1P36143 616 aa3.95□□□□□ -1.78
SRP1YNL189W STB5P38699 743 aa3.95□□□□□ -1.78
SRP1YNL189W SAW1P39735 261 aa3.95□□□□□ -1.78
SRP1YNL189W MAD3P47074 515 aa3.95□□□□□ -1.78
SRP1YNL189W MDR1P53258 950 aa3.95□□□□□ -1.78
SRP1YNL189W EFR3Q03653 782 aaKnown RBP3.95□□□□□ -1.78
SRP1YNL189W YHL041WP38730 149 aa3.94□□□□□ -1.78
SRP1YNL189W SWD1P39706 426 aa3.94□□□□□ -1.78
SRP1YNL189W MIT1P40002 666 aa3.94□□□□□ -1.78
SRP1YNL189W TIM44Q01852 431 aa3.94□□□□□ -1.78
SRP1YNL189W TRS23Q03784 219 aa3.94□□□□□ -1.78
SRP1YNL189W HOS1Q12214 470 aa3.94□□□□□ -1.78
SRP1YNL189W TAF3Q12297 353 aa3.94□□□□□ -1.78
SRP1YNL189W ABF1P14164 731 aa3.93□□□□□ -1.78
SRP1YNL189W STE4P18851 423 aa3.93□□□□□ -1.78
SRP1YNL189W VPS33P20795 691 aa3.93□□□□□ -1.78
SRP1YNL189W KIN3P22209 435 aa3.93□□□□□ -1.78
SRP1YNL189W EMP70P32802 667 aa3.93□□□□□ -1.78
SRP1YNL189W GMH1P36125 273 aa3.93□□□□□ -1.78
SRP1YNL189W YEL025CP39991 1188 aa3.93□□□□□ -1.78
SRP1YNL189W UFO1Q04511 668 aa3.93□□□□□ -1.78
SRP1YNL189W BRE1Q07457 700 aaKnown RBP3.93□□□□□ -1.78
SRP1YNL189W SUT2Q12286 268 aa3.93□□□□□ -1.78
SRP1YNL189W ARP7Q12406 477 aa3.93□□□□□ -1.78
SRP1YNL189W SEC18P18759 758 aaKnown RBP3.92□□□□□ -1.78
SRP1YNL189W APL3P38065 1025 aa3.92□□□□□ -1.78
SRP1YNL189W YJL193WP39542 402 aa3.92□□□□□ -1.78
SRP1YNL189W SSP120P39931 234 aaKnown RBP3.92□□□□□ -1.78
SRP1YNL189W UBA2P52488 636 aa3.92□□□□□ -1.78
SRP1YNL189W SPC98P53540 846 aa3.92□□□□□ -1.78
SRP1YNL189W TEP1P53916 434 aa3.92□□□□□ -1.78
SRP1YNL189W HOF1Q05080 669 aa3.92□□□□□ -1.78
SRP1YNL189W SDS22P36047 338 aa3.92□□□□□ -1.78
SRP1YNL189W YMC2P38087 329 aa3.92□□□□□ -1.78
SRP1YNL189W BDH2P39713 417 aa3.92□□□□□ -1.78
SRP1YNL189W GSM1P42950 618 aa3.92□□□□□ -1.78
SRP1YNL189W YIP4P53093 235 aa3.92□□□□□ -1.78
SRP1YNL189W MFM1Q02783 413 aa3.92□□□□□ -1.78
SRP1YNL189W IRC10Q08118 586 aa3.92□□□□□ -1.78
SRP1YNL189W RRP6Q12149 733 aaKnown RBP3.92□□□□□ -1.78
SRP1YNL189W PHO5P00635 467 aa3.91□□□□□ -1.78
SRP1YNL189W DSS4P32601 143 aa3.91□□□□□ -1.78
SRP1YNL189W TDP1P38319 544 aa3.91□□□□□ -1.78
SRP1YNL189W SPC72P39723 622 aa3.91□□□□□ -1.78
SRP1YNL189W RPT2P40327 437 aaKnown RBP3.91□□□□□ -1.78
SRP1YNL189W NOP2P40991 618 aaKnown RBP3.91□□□□□ -1.78
SRP1YNL189W PMT6P42934 759 aa3.91□□□□□ -1.78
SRP1YNL189W COS12P53053 380 aa3.91□□□□□ -1.78
SRP1YNL189W VPS73P53142 486 aaKnown RBP3.91□□□□□ -1.78
SRP1YNL189W UBX4P54730 416 aa3.91□□□□□ -1.78
SRP1YNL189W MSL5Q12186 476 aaKnown RBP RIP-Chip data3.91□□□□□ -1.78not detected
SRP1YNL189W PGI1P12709 554 aaKnown RBP3.9□□□□□ -1.79
SRP1YNL189W PMC1P38929 1173 aaPredicted RBP3.9□□□□□ -1.79
SRP1YNL189W YDR179W-AQ03983 463 aa3.9□□□□□ -1.79
SRP1YNL189W BMS1Q08965 1183 aaKnown RBP3.9□□□□□ -1.79
SRP1YNL189W TUF1P02992 437 aaKnown RBP3.89□□□□□ -1.79
SRP1YNL189W STE12P13574 688 aa3.89□□□□□ -1.79
SRP1YNL189W SWI4P25302 1093 aaKnown RBP3.89□□□□□ -1.79
SRP1YNL189W CNE1P27825 502 aa3.89□□□□□ -1.79
SRP1YNL189W PRE2P30656 287 aaKnown RBP3.89□□□□□ -1.79
SRP1YNL189W APM3P38153 483 aa3.89□□□□□ -1.79
SRP1YNL189W RIM4P38741 713 aa3.89□□□□□ -1.79
SRP1YNL189W BUD17P53727 317 aa3.89□□□□□ -1.79
SRP1YNL189W RPS15Q01855 142 aaKnown RBP3.89□□□□□ -1.79
SRP1YNL189W TRI1Q05024 226 aa3.89□□□□□ -1.79
SRP1YNL189W ENT2Q05785 613 aa3.89□□□□□ -1.79
SRP1YNL189W SEC12P11655 471 aa3.88□□□□□ -1.79
SRP1YNL189W CDC43P18898 376 aa3.88□□□□□ -1.79
SRP1YNL189W RPS7AP26786 190 aaKnown RBP3.88□□□□□ -1.79
SRP1YNL189W YPT10P38146 199 aa3.88□□□□□ -1.79
SRP1YNL189W STT3P39007 718 aaKnown RBP3.88□□□□□ -1.79
SRP1YNL189W POL31P46957 487 aa3.88□□□□□ -1.79
SRP1YNL189W TAN1P53072 289 aaPredicted RBP3.88□□□□□ -1.79
SRP1YNL189W CIA1Q05583 330 aa3.88□□□□□ -1.79
SRP1YNL189W AAD4Q07747 329 aa3.88□□□□□ -1.79
SRP1YNL189W MRN1Q08925 612 aaKnown RBP RIP-Chip data3.88□□□□□ -1.79not detected
SRP1YNL189W ICL2Q12031 575 aa3.88□□□□□ -1.79
SRP1YNL189W CAP1P28495 268 aaKnown RBP3.88□□□□□ -1.79
SRP1YNL189W DHR2P36009 735 aaPredicted RBP3.88□□□□□ -1.79
SRP1YNL189W IES5P40060 125 aa3.88□□□□□ -1.79
SRP1YNL189W ERR3P42222 437 aa3.88□□□□□ -1.79
SRP1YNL189W ASN1P49089 572 aaKnown RBP3.88□□□□□ -1.79
SRP1YNL189W TRS31Q03337 283 aa3.88□□□□□ -1.79
SRP1YNL189W CEF1Q03654 590 aaPredicted RBP3.88□□□□□ -1.79
SRP1YNL189W USA1Q03714 838 aa3.88□□□□□ -1.79
SRP1YNL189W MSH1P25846 959 aa3.87□□□□□ -1.79
SRP1YNL189W FRD1P32614 470 aaKnown RBP3.87□□□□□ -1.79
SRP1YNL189W FUI1P38196 639 aa3.87□□□□□ -1.79
SRP1YNL189W ACA1P39970 489 aa3.87□□□□□ -1.79
SRP1YNL189W VFA1P40080 203 aa3.87□□□□□ -1.79
SRP1YNL189W DAK1P54838 584 aaKnown RBP3.87□□□□□ -1.79
SRP1YNL189W NGL2Q03264 515 aaKnown RBP3.87□□□□□ -1.79
SRP1YNL189W YPL216WQ08964 1102 aa3.87□□□□□ -1.79
SRP1YNL189W MDM20Q12387 796 aaKnown RBP3.87□□□□□ -1.79
SRP1YNL189W YPK1P12688 680 aaKnown RBP3.86□□□□□ -1.79
SRP1YNL189W DBF20P32328 564 aa3.86□□□□□ -1.79
SRP1YNL189W TAF5P38129 798 aa3.86□□□□□ -1.79
SRP1YNL189W YLF2P38746 405 aa3.86□□□□□ -1.79
Retrieved 100 of 5,963 RNA–protein pairs in 48.1 ms