RNA–Protein interactions for RNA: YNL088W

TOP2, Transcript of Topoisomerase II, yeast

Gene TOP2, Length 4,287 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TOP2	YNL088W	NGR1	P32831	672 aa	Known RBP	2.6	□□□□□ -1.99
TOP2	YNL088W	KTR2	P33550	425 aa		2.6	□□□□□ -1.99
TOP2	YNL088W	GPT2	P36148	743 aa		2.6	□□□□□ -1.99
TOP2	YNL088W	NUP133	P36161	1157 aa		2.6	□□□□□ -1.99
TOP2	YNL088W	DAD2	P36162	133 aa		2.6	□□□□□ -1.99
TOP2	YNL088W	NTC20	P38302	140 aa	Predicted RBP	2.6	□□□□□ -1.99
TOP2	YNL088W	YER010C	P40011	234 aa		2.6	□□□□□ -1.99
TOP2	YNL088W	MND2	P40577	368 aa		2.6	□□□□□ -1.99
TOP2	YNL088W	XKS1	P42826	600 aa		2.6	□□□□□ -1.99
TOP2	YNL088W	APL6	P46682	809 aa		2.6	□□□□□ -1.99
TOP2	YNL088W	DSD1	P53095	428 aa		2.6	□□□□□ -1.99
TOP2	YNL088W	ESBP6	P53918	673 aa		2.6	□□□□□ -1.99
TOP2	YNL088W	YNL115C	P53925	644 aa		2.6	□□□□□ -1.99
TOP2	YNL088W	MAK10	Q02197	733 aa		2.6	□□□□□ -1.99
TOP2	YNL088W	GIS4	Q04233	774 aa		2.6	□□□□□ -1.99
TOP2	YNL088W	GRE2	Q12068	342 aa	Known RBP	2.6	□□□□□ -1.99
TOP2	YNL088W	CHS5	Q12114	671 aa	Known RBP	2.6	□□□□□ -1.99
TOP2	YNL088W	RPS9A	O13516	197 aa	Known RBP	2.6	□□□□□ -1.99
TOP2	YNL088W	PHR1	P05066	565 aa	Known RBP RIP-Chip data	2.6	□□□□□ -1.99	not detected
TOP2	YNL088W	RPS9B	P05755	195 aa	Known RBP	2.6	□□□□□ -1.99
TOP2	YNL088W	CDC36	P06100	191 aa	Predicted RBP	2.6	□□□□□ -1.99
TOP2	YNL088W	NOT3	P06102	836 aa	Known RBP	2.6	□□□□□ -1.99
TOP2	YNL088W	APE1	P14904	514 aa		2.6	□□□□□ -1.99
TOP2	YNL088W	GAP1	P19145	602 aa	Predicted RBP	2.6	□□□□□ -1.99
TOP2	YNL088W	CLB1	P24868	471 aa		2.6	□□□□□ -1.99
TOP2	YNL088W	BMH1	P29311	267 aa	Known RBP	2.6	□□□□□ -1.99
TOP2	YNL088W	YBR284W	P38150	797 aa		2.6	□□□□□ -1.99
TOP2	YNL088W	APD1	P38281	316 aa		2.6	□□□□□ -1.99
TOP2	YNL088W	RGD1	P38339	666 aa		2.6	□□□□□ -1.99
TOP2	YNL088W	MUP3	P38734	546 aa		2.6	□□□□□ -1.99
TOP2	YNL088W	YTA12	P40341	825 aa		2.6	□□□□□ -1.99
TOP2	YNL088W	YIR042C	P40586	236 aa		2.6	□□□□□ -1.99
TOP2	YNL088W	SSU1	P41930	458 aa		2.6	□□□□□ -1.99
TOP2	YNL088W	MCM6	P53091	1017 aa	Known RBP	2.6	□□□□□ -1.99
TOP2	YNL088W	URC2	Q04411	772 aa		2.6	□□□□□ -1.99
TOP2	YNL088W	CAB1	Q04430	367 aa		2.6	□□□□□ -1.99
TOP2	YNL088W	FUS2	Q05670	677 aa		2.6	□□□□□ -1.99
TOP2	YNL088W	PDR8	Q06149	701 aa		2.6	□□□□□ -1.99
TOP2	YNL088W	TRM8	Q12009	286 aa		2.6	□□□□□ -1.99
TOP2	YNL088W	SWI1	P09547	1314 aa		2.6	□□□□□ -1.99
TOP2	YNL088W	TUS1	Q06412	1307 aa		2.6	□□□□□ -1.99
TOP2	YNL088W	ADE3	P07245	946 aa	Known RBP	2.6	□□□□□ -1.99
TOP2	YNL088W	SUA5	P32579	426 aa		2.6	□□□□□ -1.99
TOP2	YNL088W	SRB2	P34162	210 aa		2.6	□□□□□ -1.99
TOP2	YNL088W	POP7	P38291	140 aa		2.6	□□□□□ -1.99
TOP2	YNL088W	YNL146W	P53906	100 aa		2.6	□□□□□ -1.99
TOP2	YNL088W	ABZ2	Q03266	374 aa		2.6	□□□□□ -1.99
TOP2	YNL088W	HLR1	Q04429	423 aa		2.6	□□□□□ -1.99
TOP2	YNL088W	SSL1	Q04673	461 aa	Predicted RBP	2.6	□□□□□ -1.99
TOP2	YNL088W	YLR413W	Q06689	675 aa		2.6	□□□□□ -1.99
TOP2	YNL088W	NBA1	Q08229	501 aa	Known RBP	2.6	□□□□□ -1.99
TOP2	YNL088W	LDB17	Q12342	491 aa		2.6	□□□□□ -1.99
TOP2	YNL088W	NSI1	Q12457	570 aa		2.6	□□□□□ -1.99
TOP2	YNL088W	RTC1	Q08281	1341 aa		2.6	□□□□□ -1.99
TOP2	YNL088W	MSB1	P21339	1137 aa	Known RBP	2.59	□□□□□ -1.99
TOP2	YNL088W	OCA4	P25366	362 aa		2.59	□□□□□ -1.99
TOP2	YNL088W	RDS1	P25611	832 aa		2.59	□□□□□ -1.99
TOP2	YNL088W	FRD1	P32614	470 aa	Known RBP	2.59	□□□□□ -1.99
TOP2	YNL088W	RPT5	P33297	434 aa	Known RBP	2.59	□□□□□ -1.99
TOP2	YNL088W	ERT1	P38140	529 aa		2.59	□□□□□ -1.99
TOP2	YNL088W	APM3	P38153	483 aa		2.59	□□□□□ -1.99
TOP2	YNL088W	RFC3	P38629	340 aa		2.59	□□□□□ -1.99
TOP2	YNL088W	SHC1	P39000	512 aa		2.59	□□□□□ -1.99
TOP2	YNL088W	UME6	P39001	836 aa		2.59	□□□□□ -1.99
TOP2	YNL088W	GCD14	P46959	383 aa	Predicted RBP	2.59	□□□□□ -1.99
TOP2	YNL088W	CPR6	P53691	371 aa	Known RBP	2.59	□□□□□ -1.99
TOP2	YNL088W	MPP6	P53725	186 aa	Predicted RBP	2.59	□□□□□ -1.99
TOP2	YNL088W	ADE12	P80210	433 aa	Known RBP	2.59	□□□□□ -1.99
TOP2	YNL088W	RLI1	Q03195	608 aa	Known RBP	2.59	□□□□□ -1.99
TOP2	YNL088W	IVY1	Q04934	453 aa		2.59	□□□□□ -1.99
TOP2	YNL088W	SPC2	Q04969	178 aa		2.59	□□□□□ -1.99
TOP2	YNL088W	ISR1	Q06098	443 aa	Known RBP	2.59	□□□□□ -1.99
TOP2	YNL088W	LUC7	Q07508	261 aa	Predicted RBP	2.59	□□□□□ -1.99
TOP2	YNL088W	TLG2	Q08144	397 aa		2.59	□□□□□ -1.99
TOP2	YNL088W	TCO89	Q08921	799 aa		2.59	□□□□□ -1.99
TOP2	YNL088W	SPE3	Q12074	293 aa	Known RBP	2.59	□□□□□ -1.99
TOP2	YNL088W	GPM3	Q12326	303 aa		2.59	□□□□□ -1.99
TOP2	YNL088W	GRX6	Q12438	231 aa		2.59	□□□□□ -1.99
TOP2	YNL088W	MDH1	P17505	334 aa	Known RBP RIP-Chip data	2.59	□□□□□ -1.99	not detected
TOP2	YNL088W	URA7	P28274	579 aa	Known RBP	2.59	□□□□□ -1.99
TOP2	YNL088W	GDH2	P33327	1092 aa	Known RBP	2.59	□□□□□ -1.99
TOP2	YNL088W	UGA2	P38067	497 aa		2.59	□□□□□ -1.99
TOP2	YNL088W	SSZ1	P38788	538 aa	Known RBP	2.59	□□□□□ -1.99
TOP2	YNL088W	PRM9	P39551	298 aa		2.59	□□□□□ -1.99
TOP2	YNL088W	SNZ3	P43545	298 aa		2.59	□□□□□ -1.99
TOP2	YNL088W	UBP6	P43593	499 aa	Known RBP	2.59	□□□□□ -1.99
TOP2	YNL088W	SNZ2	P53824	298 aa		2.59	□□□□□ -1.99
TOP2	YNL088W	PDR16	P53860	351 aa	Known RBP	2.59	□□□□□ -1.99
TOP2	YNL088W	PGA2	P53903	129 aa		2.59	□□□□□ -1.99
TOP2	YNL088W	MRPL1	Q04599	285 aa		2.59	□□□□□ -1.99
TOP2	YNL088W	BOP2	Q06150	570 aa		2.59	□□□□□ -1.99
TOP2	YNL088W	NUR1	Q12066	484 aa		2.59	□□□□□ -1.99
TOP2	YNL088W	MRPL23	Q12487	163 aa	Predicted RBP	2.59	□□□□□ -1.99
TOP2	YNL088W	MTF2	P10849	440 aa		2.59	□□□□□ -2
TOP2	YNL088W	TPS2	P31688	896 aa	Known RBP	2.59	□□□□□ -2
TOP2	YNL088W	EFT1	P32324	842 aa	Known RBP	2.59	□□□□□ -2
TOP2	YNL088W	ERG1	P32476	496 aa	Known RBP	2.59	□□□□□ -2
TOP2	YNL088W	MRPL37	P36532	105 aa		2.59	□□□□□ -2
TOP2	YNL088W	ADH5	P38113	351 aa	Known RBP	2.59	□□□□□ -2
TOP2	YNL088W	PEX28	P38848	579 aa		2.59	□□□□□ -2

Retrieved 100 of 5,963 RNA–protein pairs in 23.1 ms