RNA–Protein interactions for RNA: YML112W

CTK3, Transcript of Gamma subunit of C-terminal domain kinase I, yeastyeast

Gene CTK3, Length 891 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTK3YML112W LRO1P40345 661 aa3.43□□□□□ -1.86
CTK3YML112W LTP1P40347 161 aa3.43□□□□□ -1.86
CTK3YML112W NET1P47035 1189 aa3.43□□□□□ -1.86
CTK3YML112W YDL183CP48569 320 aa3.43□□□□□ -1.86
CTK3YML112W PIP2P52960 996 aa3.43□□□□□ -1.86
CTK3YML112W TUF1P02992 437 aaKnown RBP3.42□□□□□ -1.86
CTK3YML112W RPL7AP05737 244 aaKnown RBP3.42□□□□□ -1.86
CTK3YML112W HMG2P12684 1045 aa3.42□□□□□ -1.86
CTK3YML112W HOP1P20050 605 aa3.42□□□□□ -1.86
CTK3YML112W ATP12P22135 325 aa3.42□□□□□ -1.86
CTK3YML112W SEC5P89102 971 aa3.42□□□□□ -1.86
CTK3YML112W NGL1Q08213 363 aaKnown RBP3.42□□□□□ -1.86
CTK3YML112W TGS1Q12052 315 aa3.42□□□□□ -1.86
CTK3YML112W RPL7BQ12213 244 aaKnown RBP3.42□□□□□ -1.86
CTK3YML112W NOP56Q12460 504 aaKnown RBP RIP-Chip data3.42□□□□□ -1.86not detected
CTK3YML112W HEM1P09950 548 aaPredicted RBP3.41□□□□□ -1.86
CTK3YML112W MBR1P23493 339 aa3.41□□□□□ -1.86
CTK3YML112W DAL3P32459 195 aa3.41□□□□□ -1.86
CTK3YML112W HXT4P32467 576 aa3.41□□□□□ -1.86
CTK3YML112W YJL193WP39542 402 aa3.41□□□□□ -1.86
CTK3YML112W RNR4P49723 345 aaKnown RBP3.41□□□□□ -1.86
CTK3YML112W RPS15Q01855 142 aaKnown RBP3.41□□□□□ -1.86
CTK3YML112W GFD1Q04839 188 aaKnown RBP3.41□□□□□ -1.86
CTK3YML112W AQY1P0CD91 305 aa3.4□□□□□ -1.87
CTK3YML112W VPS33P20795 691 aa3.4□□□□□ -1.87
CTK3YML112W MRPL9P31334 269 aa3.4□□□□□ -1.87
CTK3YML112W RPC34P32910 317 aa3.4□□□□□ -1.87
CTK3YML112W SER1P33330 395 aaKnown RBP3.4□□□□□ -1.87
CTK3YML112W LOT5P34234 306 aa3.4□□□□□ -1.87
CTK3YML112W CCL1P37366 393 aa3.4□□□□□ -1.87
CTK3YML112W YPT10P38146 199 aa3.4□□□□□ -1.87
CTK3YML112W EXO1P39875 702 aa3.4□□□□□ -1.87
CTK3YML112W GPP2P40106 250 aaKnown RBP3.4□□□□□ -1.87
CTK3YML112W GAT1P43574 510 aa3.4□□□□□ -1.87
CTK3YML112W DUG1P43616 481 aaKnown RBP3.4□□□□□ -1.87
CTK3YML112W SQS1P53866 767 aaKnown RBP3.4□□□□□ -1.87
CTK3YML112W SKY1Q03656 742 aa3.4□□□□□ -1.87
CTK3YML112W USA1Q03714 838 aa3.4□□□□□ -1.87
CTK3YML112W ORM2Q06144 216 aa3.4□□□□□ -1.87
CTK3YML112W YMR084WA2P2R3 262 aa3.39□□□□□ -1.87
CTK3YML112W RNR3P21672 869 aaKnown RBP3.39□□□□□ -1.87
CTK3YML112W AEP2P22136 580 aa3.39□□□□□ -1.87
CTK3YML112W BRN1P38170 754 aa3.39□□□□□ -1.87
CTK3YML112W SRP68P38687 599 aaKnown RBP3.39□□□□□ -1.87
CTK3YML112W YFL015CP43578 164 aa3.39□□□□□ -1.87
CTK3YML112W YJL043WP47053 257 aa3.39□□□□□ -1.87
CTK3YML112W SAP4P53036 818 aa3.39□□□□□ -1.87
CTK3YML112W PEF1P53238 335 aa3.39□□□□□ -1.87
CTK3YML112W ATP23P53722 227 aa3.39□□□□□ -1.87
CTK3YML112W YPR027CQ12079 277 aa3.39□□□□□ -1.87
CTK3YML112W RMP1Q12530 201 aa3.39□□□□□ -1.87
CTK3YML112W YEL076C-AP0CX16 216 aa3.38□□□□□ -1.87
CTK3YML112W YLR464WP0CX17 216 aa3.38□□□□□ -1.87
CTK3YML112W YEL076CP39971 216 aa3.38□□□□□ -1.87
CTK3YML112W PEA2P40091 420 aa3.38□□□□□ -1.87
CTK3YML112W ULP2P40537 1034 aaPredicted RBP3.38□□□□□ -1.87
CTK3YML112W IRC3Q06683 689 aa3.38□□□□□ -1.87
CTK3YML112W FRE7Q12333 620 aa3.38□□□□□ -1.87
CTK3YML112W PCK1P10963 549 aa3.37□□□□□ -1.87
CTK3YML112W SEC12P11655 471 aa3.37□□□□□ -1.87
CTK3YML112W EUG1P32474 517 aa3.37□□□□□ -1.87
CTK3YML112W BEM3P32873 1128 aa3.37□□□□□ -1.87
CTK3YML112W APD1P38281 316 aa3.37□□□□□ -1.87
CTK3YML112W UBP12P39538 1254 aa3.37□□□□□ -1.87
CTK3YML112W IRC5P43610 853 aa3.37□□□□□ -1.87
CTK3YML112W WAR1Q03631 944 aa3.37□□□□□ -1.87
CTK3YML112W YOR378WQ08902 515 aa3.37□□□□□ -1.87
CTK3YML112W RGT2Q12300 763 aa3.37□□□□□ -1.87
CTK3YML112W SEC3P33332 1336 aaKnown RBP3.37□□□□□ -1.87
CTK3YML112W AAC1P04710 309 aa3.36□□□□□ -1.87
CTK3YML112W YPK1P12688 680 aaKnown RBP3.36□□□□□ -1.87
CTK3YML112W BET2P20133 325 aa3.36□□□□□ -1.87
CTK3YML112W CWH43P25618 953 aa3.36□□□□□ -1.87
CTK3YML112W DSS4P32601 143 aa3.36□□□□□ -1.87
CTK3YML112W OPT1P40897 799 aa3.36□□□□□ -1.87
CTK3YML112W PSA1P41940 361 aaKnown RBP3.36□□□□□ -1.87
CTK3YML112W NMD5P46970 1048 aa3.36□□□□□ -1.87
CTK3YML112W SPC105P53148 917 aa3.36□□□□□ -1.87
CTK3YML112W YGL081WP53156 320 aa3.36□□□□□ -1.87
CTK3YML112W MDR1P53258 950 aa3.36□□□□□ -1.87
CTK3YML112W DOS2P54858 310 aa3.36□□□□□ -1.87
CTK3YML112W BST1P43571 1029 aa3.35□□□□□ -1.87
CTK3YML112W NIT2P47016 307 aa3.35□□□□□ -1.87
CTK3YML112W STP1Q00947 519 aa3.35□□□□□ -1.87
CTK3YML112W MRN1Q08925 612 aaKnown RBP RIP-Chip data3.35□□□□□ -1.87not detected
CTK3YML112W CWC2Q12046 339 aaPredicted RBP3.35□□□□□ -1.87
CTK3YML112W VPS5Q92331 675 aa3.35□□□□□ -1.87
CTK3YML112W TDA10P42938 290 aa3.34□□□□□ -1.87
CTK3YML112W SLD3P53135 668 aa3.34□□□□□ -1.87
CTK3YML112W PCL8Q08966 492 aa3.34□□□□□ -1.87
CTK3YML112W PRS5Q12265 496 aaKnown RBP3.34□□□□□ -1.87
CTK3YML112W RDL1Q12305 139 aaKnown RBP3.34□□□□□ -1.87
CTK3YML112W AIM44Q99299 758 aa3.34□□□□□ -1.87
CTK3YML112W COX11P19516 300 aaKnown RBP3.33□□□□□ -1.88
CTK3YML112W GSY2P27472 705 aa3.33□□□□□ -1.88
CTK3YML112W EAF5P39995 279 aa3.33□□□□□ -1.88
CTK3YML112W YEN1P40028 759 aa3.33□□□□□ -1.88
CTK3YML112W SNO3P43544 222 aa3.33□□□□□ -1.88
CTK3YML112W SAE2P46946 345 aa3.33□□□□□ -1.88
CTK3YML112W MNT2P53059 558 aa3.33□□□□□ -1.88
Retrieved 100 of 5,963 RNA–protein pairs in 10.9 ms