RNA–Protein interactions for RNA: YHR200W

RPN10, Transcript of Non-ATPase base subunit of the 19S RP of the 26S proteasome, yeastyeast

Gene RPN10, Length 807 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN10YHR200W SPO71Q03868 1245 aa14.37□□□□□ -0.11
RPN10YHR200W FRA1Q07825 749 aa14.37□□□□□ -0.11
RPN10YHR200W ACM1Q08981 209 aa14.37□□□□□ -0.11
RPN10YHR200W CCP1P00431 361 aa14.36□□□□□ -0.11
RPN10YHR200W DSS4P32601 143 aa14.36□□□□□ -0.11
RPN10YHR200W FHL1P39521 936 aa14.36□□□□□ -0.11
RPN10YHR200W MND2P40577 368 aa14.36□□□□□ -0.11
RPN10YHR200W YJL045WP47052 634 aa14.36□□□□□ -0.11
RPN10YHR200W RTA1P53047 317 aa14.36□□□□□ -0.11
RPN10YHR200W VPS9P54787 451 aa14.36□□□□□ -0.11
RPN10YHR200W CEG1Q01159 459 aaPredicted RBP14.36□□□□□ -0.11
RPN10YHR200W EMI2Q04409 500 aaKnown RBP14.36□□□□□ -0.11
RPN10YHR200W PMT7Q06644 662 aa14.36□□□□□ -0.11
RPN10YHR200W MPC54Q08550 464 aa14.36□□□□□ -0.11
RPN10YHR200W MGT1P26188 188 aa14.35□□□□□ -0.11
RPN10YHR200W PEP7P32609 515 aa14.35□□□□□ -0.11
RPN10YHR200W HSP78P33416 811 aa14.35□□□□□ -0.11
RPN10YHR200W AIM18P38884 321 aa14.35□□□□□ -0.11
RPN10YHR200W PRK1P40494 810 aa14.35□□□□□ -0.11
RPN10YHR200W ATG36P46983 293 aa14.35□□□□□ -0.11
RPN10YHR200W KTR6P54070 446 aa14.35□□□□□ -0.11
RPN10YHR200W BET4Q00618 327 aa14.35□□□□□ -0.11
RPN10YHR200W YMR027WQ04371 470 aa14.35□□□□□ -0.11
RPN10YHR200W SPG3Q04398 127 aaPredicted RBP14.35□□□□□ -0.11
RPN10YHR200W HIP1P06775 603 aa14.34□□□□□ -0.11
RPN10YHR200W CDC24P11433 854 aaPredicted RBP14.34□□□□□ -0.11
RPN10YHR200W MRPL25P23369 157 aa14.34□□□□□ -0.11
RPN10YHR200W ECM32P32644 1121 aaKnown RBP14.34□□□□□ -0.11
RPN10YHR200W RAD26P40352 1085 aa14.34□□□□□ -0.11
RPN10YHR200W YJL132WP47014 750 aa14.34□□□□□ -0.11
RPN10YHR200W PNG1Q02890 363 aa14.34□□□□□ -0.11
RPN10YHR200W GRX8Q05926 109 aa14.34□□□□□ -0.11
RPN10YHR200W SPE3Q12074 293 aaKnown RBP14.34□□□□□ -0.11
RPN10YHR200W SVS1Q12254 260 aa14.34□□□□□ -0.11
RPN10YHR200W AVL9Q12500 764 aa14.34□□□□□ -0.11
RPN10YHR200W EFG1Q3E705 233 aaKnown RBP14.34□□□□□ -0.11
RPN10YHR200W PAB1P04147 577 aaKnown RBP RIP-Chip data14.33□□□□□ -0.12not detected
RPN10YHR200W GCS1P35197 352 aa14.33□□□□□ -0.12
RPN10YHR200W DUG2P38149 878 aa14.33□□□□□ -0.12
RPN10YHR200W LAM1P38851 1228 aa14.33□□□□□ -0.12
RPN10YHR200W CCT2P39076 527 aaKnown RBP14.33□□□□□ -0.12
RPN10YHR200W SCC4P40090 624 aa14.33□□□□□ -0.12
RPN10YHR200W AAD15Q08361 143 aa14.33□□□□□ -0.12
RPN10YHR200W GPM3Q12326 303 aa14.33□□□□□ -0.12
RPN10YHR200W AHC1Q12433 566 aa14.33□□□□□ -0.12
RPN10YHR200W RRD2Q12461 358 aa14.33□□□□□ -0.12
RPN10YHR200W YCR015CP25616 317 aa14.32□□□□□ -0.12
RPN10YHR200W YIH1P25637 258 aa14.32□□□□□ -0.12
RPN10YHR200W YBR056WP38081 501 aa14.32□□□□□ -0.12
RPN10YHR200W MSR1P38714 643 aa14.32□□□□□ -0.12
RPN10YHR200W FSH1P38777 243 aaKnown RBP14.32□□□□□ -0.12
RPN10YHR200W NMD3P38861 518 aaKnown RBP14.32□□□□□ -0.12
RPN10YHR200W SAP1P39955 897 aaKnown RBP14.32□□□□□ -0.12
RPN10YHR200W BTT1P40314 149 aaPredicted RBP14.32□□□□□ -0.12
RPN10YHR200W MKT1P40850 830 aaKnown RBP14.32□□□□□ -0.12
RPN10YHR200W PNP1Q05788 311 aa14.32□□□□□ -0.12
RPN10YHR200W ECM22Q05958 814 aaPredicted RBP14.32□□□□□ -0.12
RPN10YHR200W KAR4P25583 335 aa14.31□□□□□ -0.12
RPN10YHR200W ILV6P25605 309 aaKnown RBP14.31□□□□□ -0.12
RPN10YHR200W GPI10P30777 616 aa14.31□□□□□ -0.12
RPN10YHR200W YKR051WP36142 418 aa14.31□□□□□ -0.12
RPN10YHR200W FUI1P38196 639 aa14.31□□□□□ -0.12
RPN10YHR200W BIT2P38346 545 aa14.31□□□□□ -0.12
RPN10YHR200W HIS1P00498 297 aaKnown RBP14.3□□□□□ -0.12
RPN10YHR200W CMD1P06787 147 aaKnown RBP14.3□□□□□ -0.12
RPN10YHR200W RPB2P08518 1224 aaKnown RBP14.3□□□□□ -0.12
RPN10YHR200W IMA3P0CW40 589 aa14.3□□□□□ -0.12
RPN10YHR200W IMA4P0CW41 589 aa14.3□□□□□ -0.12
RPN10YHR200W DAL1P32375 460 aa14.3□□□□□ -0.12
RPN10YHR200W FMP10P40098 244 aa14.3□□□□□ -0.12
RPN10YHR200W SMX2P40204 77 aaKnown RBP14.3□□□□□ -0.12
RPN10YHR200W YJR079WP47126 109 aa14.3□□□□□ -0.12
RPN10YHR200W YLR257WQ06146 321 aaKnown RBP14.3□□□□□ -0.12
RPN10YHR200W IMA2Q08295 589 aa14.3□□□□□ -0.12
RPN10YHR200W HOS1Q12214 470 aa14.3□□□□□ -0.12
RPN10YHR200W ARG4P04076 463 aaPredicted RBP14.29□□□□□ -0.12
RPN10YHR200W MET16P18408 261 aaPredicted RBP14.29□□□□□ -0.12
RPN10YHR200W YBR225WP38321 900 aa14.29□□□□□ -0.12
RPN10YHR200W RRT5P43607 289 aa14.29□□□□□ -0.12
RPN10YHR200W SAE2P46946 345 aa14.29□□□□□ -0.12
RPN10YHR200W IML2P47031 731 aa14.29□□□□□ -0.12
RPN10YHR200W RTT101P47050 842 aa14.29□□□□□ -0.12
RPN10YHR200W URB2P47108 1174 aa14.29□□□□□ -0.12
RPN10YHR200W MRX6P48564 524 aa14.29□□□□□ -0.12
RPN10YHR200W KTR5P53966 522 aaPredicted RBP14.29□□□□□ -0.12
RPN10YHR200W HEM15P16622 393 aa14.28□□□□□ -0.12
RPN10YHR200W CBF1P17106 351 aa14.28□□□□□ -0.12
RPN10YHR200W PEX2P32800 271 aa14.28□□□□□ -0.12
RPN10YHR200W PEX5P35056 612 aa14.28□□□□□ -0.12
RPN10YHR200W ECM13P38195 257 aa14.28□□□□□ -0.12
RPN10YHR200W OTU2P38747 307 aaKnown RBP14.28□□□□□ -0.12
RPN10YHR200W STL1P39932 569 aa14.28□□□□□ -0.12
RPN10YHR200W FAF1P40546 346 aaPredicted RBP14.28□□□□□ -0.12
RPN10YHR200W YIR016WP40572 265 aa14.28□□□□□ -0.12
RPN10YHR200W ALY2P47029 1046 aa14.28□□□□□ -0.12
RPN10YHR200W YPR003CP53394 754 aa14.28□□□□□ -0.12
RPN10YHR200W GCN5Q03330 439 aa14.28□□□□□ -0.12
RPN10YHR200W HER2Q03557 464 aa14.28□□□□□ -0.12
RPN10YHR200W NRT1Q08485 598 aa14.28□□□□□ -0.12
RPN10YHR200W PDE1P22434 369 aa14.27□□□□□ -0.13
Retrieved 100 of 5,963 RNA–protein pairs in 52.8 ms