RNA–Protein interactions for RNA: YGR240C

PFK1, Transcript of Alpha subunit of heterooctameric phosphofructokinase, yeast

Gene PFK1, Length 2,964 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PFK1	YGR240C	MET13	P53128	600 aa		4.59	□□□□□ -1.67
PFK1	YGR240C	FCP1	Q03254	732 aa		4.59	□□□□□ -1.67
PFK1	YGR240C	UTP5	Q04177	643 aa	Known RBP	4.59	□□□□□ -1.67
PFK1	YGR240C	GYP5	Q12344	894 aa		4.59	□□□□□ -1.67
PFK1	YGR240C	RMP1	Q12530	201 aa		4.59	□□□□□ -1.67
PFK1	YGR240C	CDC9	P04819	755 aa		4.59	□□□□□ -1.67
PFK1	YGR240C	RPB10	P22139	70 aa		4.59	□□□□□ -1.67
PFK1	YGR240C	CAD1	P24813	409 aa	Known RBP	4.59	□□□□□ -1.67
PFK1	YGR240C	DAL3	P32459	195 aa		4.59	□□□□□ -1.67
PFK1	YGR240C	SLC1	P33333	303 aa		4.59	□□□□□ -1.67
PFK1	YGR240C	DID4	P36108	232 aa		4.59	□□□□□ -1.67
PFK1	YGR240C	ALG14	P38242	237 aa		4.59	□□□□□ -1.67
PFK1	YGR240C	YBR287W	P38355	427 aa		4.59	□□□□□ -1.67
PFK1	YGR240C	SMF2	P38778	549 aa		4.59	□□□□□ -1.67
PFK1	YGR240C	YNR061C	P53747	219 aa		4.59	□□□□□ -1.67
PFK1	YGR240C	DAL4	Q04895	635 aa		4.59	□□□□□ -1.67
PFK1	YGR240C	RSC3	Q06639	885 aa		4.59	□□□□□ -1.67
PFK1	YGR240C	HAA1	Q12753	694 aa	Known RBP	4.59	□□□□□ -1.67
PFK1	YGR240C	LAM4	P38800	1345 aa		4.59	□□□□□ -1.68
PFK1	YGR240C	GCR1	P07261	785 aa		4.59	□□□□□ -1.68
PFK1	YGR240C	SRP54	P20424	541 aa	Known RBP	4.59	□□□□□ -1.68
PFK1	YGR240C	MSN4	P33749	630 aa		4.59	□□□□□ -1.68
PFK1	YGR240C	PET100	P38958	111 aa		4.59	□□□□□ -1.68
PFK1	YGR240C	GIP4	P39732	760 aa		4.59	□□□□□ -1.68
PFK1	YGR240C	ATG3	P40344	310 aa		4.59	□□□□□ -1.68
PFK1	YGR240C	GYP8	P43570	497 aa		4.59	□□□□□ -1.68
PFK1	YGR240C	ABM1	P47146	123 aa		4.59	□□□□□ -1.68
PFK1	YGR240C	YMR1	P47147	688 aa	Known RBP RIP-Chip data	4.59	□□□□□ -1.68	not detected
PFK1	YGR240C	TOM22	P49334	152 aa		4.59	□□□□□ -1.68
PFK1	YGR240C	ASE1	P50275	885 aa		4.59	□□□□□ -1.68
PFK1	YGR240C	ECM18	Q04623	453 aa		4.59	□□□□□ -1.68
PFK1	YGR240C	RBD2	Q12270	262 aa		4.59	□□□□□ -1.68
PFK1	YGR240C	BI4	P03879	638 aa		4.58	□□□□□ -1.68
PFK1	YGR240C	GSY1	P23337	708 aa		4.58	□□□□□ -1.68
PFK1	YGR240C	DOM34	P33309	386 aa		4.58	□□□□□ -1.68
PFK1	YGR240C	COS111	P38308	924 aa		4.58	□□□□□ -1.68
PFK1	YGR240C	SIP3	P38717	1229 aa		4.58	□□□□□ -1.68
PFK1	YGR240C	SSZ1	P38788	538 aa	Known RBP	4.58	□□□□□ -1.68
PFK1	YGR240C	MNL1	P38888	796 aa		4.58	□□□□□ -1.68
PFK1	YGR240C	YJR061W	P40355	935 aa		4.58	□□□□□ -1.68
PFK1	YGR240C	ALR2	P43553	858 aa		4.58	□□□□□ -1.68
PFK1	YGR240C	APL6	P46682	809 aa		4.58	□□□□□ -1.68
PFK1	YGR240C	DSE4	P53753	1117 aa		4.58	□□□□□ -1.68
PFK1	YGR240C	GYL1	Q04322	720 aa		4.58	□□□□□ -1.68
PFK1	YGR240C	GRE2	Q12068	342 aa	Known RBP	4.58	□□□□□ -1.68
PFK1	YGR240C	VPS54	Q12071	889 aa		4.58	□□□□□ -1.68
PFK1	YGR240C	TDH1	P00360	332 aa	Known RBP	4.58	□□□□□ -1.68
PFK1	YGR240C	LPD1	P09624	499 aa	Known RBP	4.58	□□□□□ -1.68
PFK1	YGR240C	FUS3	P16892	353 aa	Known RBP	4.58	□□□□□ -1.68
PFK1	YGR240C	AFT1	P22149	690 aa		4.58	□□□□□ -1.68
PFK1	YGR240C	SLY41	P22215	453 aa		4.58	□□□□□ -1.68
PFK1	YGR240C	RPI1	P23250	407 aa	Known RBP	4.58	□□□□□ -1.68
PFK1	YGR240C	OCA4	P25366	362 aa		4.58	□□□□□ -1.68
PFK1	YGR240C	NGG1	P32494	702 aa		4.58	□□□□□ -1.68
PFK1	YGR240C	SLN1	P39928	1220 aa	Predicted RBP	4.58	□□□□□ -1.68
PFK1	YGR240C	YRB2	P40517	327 aa		4.58	□□□□□ -1.68
PFK1	YGR240C	SMK1	P41808	388 aa		4.58	□□□□□ -1.68
PFK1	YGR240C	FET5	P43561	622 aa		4.58	□□□□□ -1.68
PFK1	YGR240C	HOS3	Q02959	697 aa	Known RBP	4.58	□□□□□ -1.68
PFK1	YGR240C	SPP1	Q03012	353 aa		4.58	□□□□□ -1.68
PFK1	YGR240C	GTB1	Q04924	702 aa		4.58	□□□□□ -1.68
PFK1	YGR240C	DON1	Q05610	365 aa		4.58	□□□□□ -1.68
PFK1	YGR240C	TMA46	Q12000	345 aa	Known RBP	4.58	□□□□□ -1.68
PFK1	YGR240C	NSI1	Q12457	570 aa		4.58	□□□□□ -1.68
PFK1	YGR240C	PRB1	P09232	635 aa		4.57	□□□□□ -1.68
PFK1	YGR240C	CDC42	P19073	191 aa		4.57	□□□□□ -1.68
PFK1	YGR240C	PRP9	P19736	530 aa	Known RBP	4.57	□□□□□ -1.68
PFK1	YGR240C	SHM2	P37291	469 aa	Known RBP	4.57	□□□□□ -1.68
PFK1	YGR240C	RFC3	P38629	340 aa		4.57	□□□□□ -1.68
PFK1	YGR240C	CKB2	P38930	258 aa		4.57	□□□□□ -1.68
PFK1	YGR240C	EMP65	P40085	556 aa		4.57	□□□□□ -1.68
PFK1	YGR240C	SPO22	P40511	975 aa		4.57	□□□□□ -1.68
PFK1	YGR240C	MND2	P40577	368 aa		4.57	□□□□□ -1.68
PFK1	YGR240C	FIG4	P42837	879 aa		4.57	□□□□□ -1.68
PFK1	YGR240C	EMW1	P42842	904 aa	Known RBP	4.57	□□□□□ -1.68
PFK1	YGR240C	GZF3	P42944	551 aa	Known RBP	4.57	□□□□□ -1.68
PFK1	YGR240C	HFM1	P51979	1187 aa		4.57	□□□□□ -1.68
PFK1	YGR240C	SGF73	P53165	657 aa		4.57	□□□□□ -1.68
PFK1	YGR240C	CNM67	P53865	581 aa	Known RBP	4.57	□□□□□ -1.68
PFK1	YGR240C	MOT3	P54785	490 aa	Known RBP	4.57	□□□□□ -1.68
PFK1	YGR240C	SPO19	Q03029	223 aa		4.57	□□□□□ -1.68
PFK1	YGR240C	MRPS17	Q03246	237 aa	Predicted RBP	4.57	□□□□□ -1.68
PFK1	YGR240C	YAP6	Q03935	383 aa		4.57	□□□□□ -1.68
PFK1	YGR240C	IVY1	Q04934	453 aa		4.57	□□□□□ -1.68
PFK1	YGR240C	FUS2	Q05670	677 aa		4.57	□□□□□ -1.68
PFK1	YGR240C	RTN2	Q12443	393 aa		4.57	□□□□□ -1.68
PFK1	YGR240C	PFK27	Q12471	397 aa	Predicted RBP	4.57	□□□□□ -1.68
PFK1	YGR240C	HKR1	P41809	1802 aa		4.57	□□□□□ -1.68
PFK1	YGR240C	GAL7	P08431	366 aa		4.57	□□□□□ -1.68
PFK1	YGR240C	CWH43	P25618	953 aa		4.57	□□□□□ -1.68
PFK1	YGR240C	SEA4	P38164	1038 aa		4.57	□□□□□ -1.68
PFK1	YGR240C	SOH1	P38633	127 aa		4.57	□□□□□ -1.68
PFK1	YGR240C	YDR089W	P38966	869 aa		4.57	□□□□□ -1.68
PFK1	YGR240C	SHC1	P39000	512 aa		4.57	□□□□□ -1.68
PFK1	YGR240C	HSH155	P49955	971 aa	Known RBP	4.57	□□□□□ -1.68
PFK1	YGR240C	PIB2	P53191	635 aa		4.57	□□□□□ -1.68
PFK1	YGR240C	ART5	P53244	586 aa	Known RBP	4.57	□□□□□ -1.68
PFK1	YGR240C	NKP2	Q06162	153 aa		4.57	□□□□□ -1.68
PFK1	YGR240C	SNF1	P06782	633 aa	Known RBP	4.56	□□□□□ -1.68
PFK1	YGR240C	PCL2	P25693	308 aa		4.56	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 20.7 ms