RNA–Protein interactions for RNA: YEL005C

VAB2, Transcript of Subunit of the BLOC-1 complex involved in endosomal maturation, yeastyeast

Gene VAB2, Length 849 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VAB2YEL005C YHR097CP38809 366 aaKnown RBP3.85□□□□□ -1.79
VAB2YEL005C VPS27P40343 622 aaKnown RBP3.85□□□□□ -1.79
VAB2YEL005C ATG36P46983 293 aa3.85□□□□□ -1.79
VAB2YEL005C PIP2P52960 996 aa3.85□□□□□ -1.79
VAB2YEL005C MNT2P53059 558 aa3.85□□□□□ -1.79
VAB2YEL005C NMA2P53204 395 aa3.85□□□□□ -1.79
VAB2YEL005C PAP2P53632 584 aaKnown RBP3.85□□□□□ -1.79
VAB2YEL005C MFM1Q02783 413 aa3.85□□□□□ -1.79
VAB2YEL005C HOF1Q05080 669 aa3.85□□□□□ -1.79
VAB2YEL005C VAS1P07806 1104 aaKnown RBP3.84□□□□□ -1.79
VAB2YEL005C GFA1P14742 717 aaKnown RBP3.84□□□□□ -1.79
VAB2YEL005C PHO81P17442 1178 aa3.84□□□□□ -1.79
VAB2YEL005C HOP1P20050 605 aa3.84□□□□□ -1.79
VAB2YEL005C RMA1P36001 430 aaKnown RBP3.84□□□□□ -1.79
VAB2YEL005C SET3P36124 751 aa3.84□□□□□ -1.79
VAB2YEL005C EHT1P38295 451 aa3.84□□□□□ -1.79
VAB2YEL005C YJL193WP39542 402 aa3.84□□□□□ -1.79
VAB2YEL005C SCS2P40075 244 aaKnown RBP3.84□□□□□ -1.79
VAB2YEL005C HIS6P40545 261 aa3.84□□□□□ -1.79
VAB2YEL005C PMT6P42934 759 aa3.84□□□□□ -1.79
VAB2YEL005C YGR054WP53235 642 aaKnown RBP3.84□□□□□ -1.79
VAB2YEL005C NGL2Q03264 515 aaKnown RBP3.84□□□□□ -1.79
VAB2YEL005C VMS1Q04311 632 aaKnown RBP3.84□□□□□ -1.79
VAB2YEL005C IZH3Q07959 543 aa3.84□□□□□ -1.79
VAB2YEL005C BMS1Q08965 1183 aaKnown RBP3.84□□□□□ -1.79
VAB2YEL005C RKI1Q12189 258 aa3.84□□□□□ -1.79
VAB2YEL005C MDM20Q12387 796 aaKnown RBP3.84□□□□□ -1.79
VAB2YEL005C GAL1P04385 528 aa3.83□□□□□ -1.8
VAB2YEL005C CTT1P06115 562 aa3.83□□□□□ -1.8
VAB2YEL005C CAP1P28495 268 aaKnown RBP3.83□□□□□ -1.8
VAB2YEL005C MTC7P32633 139 aa3.83□□□□□ -1.8
VAB2YEL005C TMT1P32643 299 aa3.83□□□□□ -1.8
VAB2YEL005C FAF1P40546 346 aaPredicted RBP3.83□□□□□ -1.8
VAB2YEL005C MRH1Q12117 320 aaPredicted RBP3.83□□□□□ -1.8
VAB2YEL005C YOL114CQ12322 202 aa3.83□□□□□ -1.8
VAB2YEL005C ARP7Q12406 477 aa3.83□□□□□ -1.8
VAB2YEL005C LAM4P38800 1345 aa3.83□□□□□ -1.8
VAB2YEL005C BNR1P40450 1375 aa3.83□□□□□ -1.8
VAB2YEL005C BET2P20133 325 aa3.82□□□□□ -1.8
VAB2YEL005C VPS33P20795 691 aa3.82□□□□□ -1.8
VAB2YEL005C ARG1P22768 420 aa3.82□□□□□ -1.8
VAB2YEL005C MSH1P25846 959 aa3.82□□□□□ -1.8
VAB2YEL005C MSS1P32559 526 aaPredicted RBP3.82□□□□□ -1.8
VAB2YEL005C LOT5P34234 306 aa3.82□□□□□ -1.8
VAB2YEL005C CDS1P38221 457 aa3.82□□□□□ -1.8
VAB2YEL005C PIH1P38768 344 aa3.82□□□□□ -1.8
VAB2YEL005C YNR071CP53757 342 aa3.82□□□□□ -1.8
VAB2YEL005C TRS23Q03784 219 aa3.82□□□□□ -1.8
VAB2YEL005C TRI1Q05024 226 aa3.82□□□□□ -1.8
VAB2YEL005C TGS1Q12052 315 aa3.82□□□□□ -1.8
VAB2YEL005C RRP6Q12149 733 aaKnown RBP3.82□□□□□ -1.8
VAB2YEL005C SUT2Q12286 268 aa3.82□□□□□ -1.8
VAB2YEL005C DBP10Q12389 995 aaKnown RBP3.82□□□□□ -1.8
VAB2YEL005C URA3P03962 267 aa3.81□□□□□ -1.8
VAB2YEL005C DSS4P32601 143 aa3.81□□□□□ -1.8
VAB2YEL005C PTH2P34222 208 aa3.81□□□□□ -1.8
VAB2YEL005C YLF2P38746 405 aa3.81□□□□□ -1.8
VAB2YEL005C LNP1P38878 278 aa3.81□□□□□ -1.8
VAB2YEL005C SWD1P39706 426 aa3.81□□□□□ -1.8
VAB2YEL005C VFA1P40080 203 aa3.81□□□□□ -1.8
VAB2YEL005C LRO1P40345 661 aa3.81□□□□□ -1.8
VAB2YEL005C TEP1P53916 434 aa3.81□□□□□ -1.8
VAB2YEL005C EFR3Q03653 782 aaKnown RBP3.81□□□□□ -1.8
VAB2YEL005C YDL073WQ07454 984 aa3.81□□□□□ -1.8
VAB2YEL005C RTK1Q12100 620 aaPredicted RBP3.81□□□□□ -1.8
VAB2YEL005C RPN13O13563 156 aa3.8□□□□□ -1.8
VAB2YEL005C SPO11P23179 398 aa3.8□□□□□ -1.8
VAB2YEL005C MRPL7P36519 292 aa3.8□□□□□ -1.8
VAB2YEL005C MAD2P40958 196 aa3.8□□□□□ -1.8
VAB2YEL005C GSM1P42950 618 aa3.8□□□□□ -1.8
VAB2YEL005C IDS2P46958 469 aa3.8□□□□□ -1.8
VAB2YEL005C YDL183CP48569 320 aa3.8□□□□□ -1.8
VAB2YEL005C YIP4P53093 235 aa3.8□□□□□ -1.8
VAB2YEL005C UBX4P54730 416 aa3.8□□□□□ -1.8
VAB2YEL005C YDR179W-AQ03983 463 aa3.8□□□□□ -1.8
VAB2YEL005C HIM1Q06674 414 aa3.8□□□□□ -1.8
VAB2YEL005C TAF3Q12297 353 aa3.8□□□□□ -1.8
VAB2YEL005C ADH4P10127 382 aa3.79□□□□□ -1.8
VAB2YEL005C RPA135P22138 1203 aaKnown RBP3.79□□□□□ -1.8
VAB2YEL005C APM3P38153 483 aa3.79□□□□□ -1.8
VAB2YEL005C TDP1P38319 544 aa3.79□□□□□ -1.8
VAB2YEL005C QRI7P43122 407 aa3.79□□□□□ -1.8
VAB2YEL005C IMO32P53219 342 aa3.79□□□□□ -1.8
VAB2YEL005C CEG1Q01159 459 aaPredicted RBP3.79□□□□□ -1.8
VAB2YEL005C ARA2Q04212 335 aa3.79□□□□□ -1.8
VAB2YEL005C GFD1Q04839 188 aaKnown RBP3.79□□□□□ -1.8
VAB2YEL005C CRD1Q07560 283 aa3.79□□□□□ -1.8
VAB2YEL005C MSL5Q12186 476 aaKnown RBP RIP-Chip data3.79□□□□□ -1.8not detected
VAB2YEL005C PHO5P00635 467 aa3.78□□□□□ -1.8
VAB2YEL005C MIS1P09440 975 aaKnown RBP3.78□□□□□ -1.8
VAB2YEL005C PGI1P12709 554 aaKnown RBP3.78□□□□□ -1.8
VAB2YEL005C STE12P13574 688 aa3.78□□□□□ -1.8
VAB2YEL005C VPS34P22543 875 aa3.78□□□□□ -1.8
VAB2YEL005C SWC3P31376 625 aa3.78□□□□□ -1.8
VAB2YEL005C MRS6P32864 603 aaKnown RBP3.78□□□□□ -1.8
VAB2YEL005C STB5P38699 743 aa3.78□□□□□ -1.8
VAB2YEL005C MUP3P38734 546 aa3.78□□□□□ -1.8
VAB2YEL005C YIL166CP40445 542 aa3.78□□□□□ -1.8
VAB2YEL005C CCT7P42943 550 aaKnown RBP3.78□□□□□ -1.8
VAB2YEL005C MAD3P47074 515 aa3.78□□□□□ -1.8
Retrieved 100 of 5,963 RNA–protein pairs in 17.6 ms