RNA–Protein interactions for RNA: YDR077W

SED1, Transcript of Major stress-induced structural GPI-cell wall glycoprotein, yeastyeast

Gene SED1, Length 1,017 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SED1YDR077W SCC4P40090 624 aa9.85□□□□□ -0.83
SED1YDR077W TAF1P46677 1066 aa9.85□□□□□ -0.83
SED1YDR077W RSM26P47141 266 aa9.85□□□□□ -0.83
SED1YDR077W ZIP2P53061 704 aa9.85□□□□□ -0.83
SED1YDR077W PCL10P53124 433 aa9.85□□□□□ -0.83
SED1YDR077W USA1Q03714 838 aa9.85□□□□□ -0.83
SED1YDR077W ATP1P07251 545 aaKnown RBP9.84□□□□□ -0.83
SED1YDR077W RGR1P19263 1082 aa9.84□□□□□ -0.83
SED1YDR077W YCR015CP25616 317 aa9.84□□□□□ -0.83
SED1YDR077W RAD5P32849 1169 aaPredicted RBP9.84□□□□□ -0.83
SED1YDR077W YBR284WP38150 797 aa9.84□□□□□ -0.83
SED1YDR077W MND2P40577 368 aa9.84□□□□□ -0.83
SED1YDR077W TRS85P46944 698 aa9.84□□□□□ -0.83
SED1YDR077W MNN11P46985 422 aaKnown RBP9.84□□□□□ -0.83
SED1YDR077W ALY2P47029 1046 aa9.84□□□□□ -0.83
SED1YDR077W RTA1P53047 317 aa9.84□□□□□ -0.83
SED1YDR077W KTR5P53966 522 aaPredicted RBP9.84□□□□□ -0.83
SED1YDR077W ADA2Q02336 434 aa9.84□□□□□ -0.83
SED1YDR077W SPP1Q03012 353 aa9.84□□□□□ -0.83
SED1YDR077W HRD3Q05787 833 aa9.84□□□□□ -0.83
SED1YDR077W HRT3Q12347 344 aa9.84□□□□□ -0.83
SED1YDR077W APM4Q99186 491 aa9.84□□□□□ -0.83
SED1YDR077W CAD1P24813 409 aaKnown RBP9.83□□□□□ -0.84
SED1YDR077W SLD2P34252 453 aa9.83□□□□□ -0.84
SED1YDR077W SQT1P35184 431 aa9.83□□□□□ -0.84
SED1YDR077W MSR1P38714 643 aa9.83□□□□□ -0.84
SED1YDR077W AIM18P38884 321 aa9.83□□□□□ -0.84
SED1YDR077W FIR1P40020 876 aa9.83□□□□□ -0.84
SED1YDR077W OPT1P40897 799 aa9.83□□□□□ -0.84
SED1YDR077W CDC1P40986 491 aa9.83□□□□□ -0.84
SED1YDR077W RSM7P47150 247 aa9.83□□□□□ -0.84
SED1YDR077W RFX1P48743 811 aa9.83□□□□□ -0.84
SED1YDR077W NUT1P53114 1132 aa9.83□□□□□ -0.84
SED1YDR077W VPS9P54787 451 aa9.83□□□□□ -0.84
SED1YDR077W YML083CQ04526 418 aa9.83□□□□□ -0.84
SED1YDR077W PIG1Q06216 648 aa9.83□□□□□ -0.84
SED1YDR077W LEA1Q08963 238 aaPredicted RBP9.83□□□□□ -0.84
SED1YDR077W AVL9Q12500 764 aa9.83□□□□□ -0.84
SED1YDR077W PAB1P04147 577 aaKnown RBP RIP-Chip data9.82□□□□□ -0.84not detected
SED1YDR077W IMA3P0CW40 589 aa9.82□□□□□ -0.84
SED1YDR077W IMA4P0CW41 589 aa9.82□□□□□ -0.84
SED1YDR077W HXT3P32466 567 aaKnown RBP9.82□□□□□ -0.84
SED1YDR077W WHI3P34761 661 aaKnown RBP9.82□□□□□ -0.84
SED1YDR077W PAM1P37304 830 aaKnown RBP9.82□□□□□ -0.84
SED1YDR077W YBR053CP38235 358 aa9.82□□□□□ -0.84
SED1YDR077W NMD3P38861 518 aaKnown RBP9.82□□□□□ -0.84
SED1YDR077W PRM9P39551 298 aa9.82□□□□□ -0.84
SED1YDR077W PRK1P40494 810 aa9.82□□□□□ -0.84
SED1YDR077W DSN1P40568 576 aa9.82□□□□□ -0.84
SED1YDR077W ALA1P40825 983 aaKnown RBP9.82□□□□□ -0.84
SED1YDR077W KTR6P54070 446 aa9.82□□□□□ -0.84
SED1YDR077W MTD1Q02046 320 aaKnown RBP9.82□□□□□ -0.84
SED1YDR077W SPG3Q04398 127 aaPredicted RBP9.82□□□□□ -0.84
SED1YDR077W IMA2Q08295 589 aa9.82□□□□□ -0.84
SED1YDR077W ARP7Q12406 477 aa9.82□□□□□ -0.84
SED1YDR077W ILV2P07342 687 aaKnown RBP9.81□□□□□ -0.84
SED1YDR077W YCR051WP25631 222 aa9.81□□□□□ -0.84
SED1YDR077W RRT5P43607 289 aa9.81□□□□□ -0.84
SED1YDR077W SAE2P46946 345 aa9.81□□□□□ -0.84
SED1YDR077W AIM32Q04689 311 aa9.81□□□□□ -0.84
SED1YDR077W MPC54Q08550 464 aa9.81□□□□□ -0.84
SED1YDR077W EFG1Q3E705 233 aaKnown RBP9.81□□□□□ -0.84
SED1YDR077W CCP1P00431 361 aa9.8□□□□□ -0.84
SED1YDR077W URA7P28274 579 aaKnown RBP9.8□□□□□ -0.84
SED1YDR077W DSS4P32601 143 aa9.8□□□□□ -0.84
SED1YDR077W YBR056WP38081 501 aa9.8□□□□□ -0.84
SED1YDR077W VPS25P47142 202 aa9.8□□□□□ -0.84
SED1YDR077W INA17Q02888 182 aa9.8□□□□□ -0.84
SED1YDR077W FAR8Q05040 523 aa9.8□□□□□ -0.84
SED1YDR077W MRI1Q06489 411 aaKnown RBP9.8□□□□□ -0.84
SED1YDR077W VHS3Q08438 674 aa9.8□□□□□ -0.84
SED1YDR077W MRN1Q08925 612 aaKnown RBP RIP-Chip data9.8□□□□□ -0.84 RIP-Chip
SED1YDR077W SPE3Q12074 293 aaKnown RBP9.8□□□□□ -0.84
SED1YDR077W GPM3Q12326 303 aa9.8□□□□□ -0.84
SED1YDR077W NCA2Q12374 616 aa9.8□□□□□ -0.84
SED1YDR077W MAS1P10507 462 aa9.79□□□□□ -0.84
SED1YDR077W SRV2P17555 526 aaKnown RBP9.79□□□□□ -0.84
SED1YDR077W MET16P18408 261 aaPredicted RBP9.79□□□□□ -0.84
SED1YDR077W YIH1P25637 258 aa9.79□□□□□ -0.84
SED1YDR077W GDT1P38301 280 aaPredicted RBP9.79□□□□□ -0.84
SED1YDR077W BIT2P38346 545 aa9.79□□□□□ -0.84
SED1YDR077W OTU2P38747 307 aaKnown RBP9.79□□□□□ -0.84
SED1YDR077W FSH1P38777 243 aaKnown RBP9.79□□□□□ -0.84
SED1YDR077W LAM1P38851 1228 aa9.79□□□□□ -0.84
SED1YDR077W REV7P38927 245 aa9.79□□□□□ -0.84
SED1YDR077W FHL1P39521 936 aa9.79□□□□□ -0.84
SED1YDR077W RAD26P40352 1085 aa9.79□□□□□ -0.84
SED1YDR077W YJL132WP47014 750 aa9.79□□□□□ -0.84
SED1YDR077W BFA1P47113 574 aa9.79□□□□□ -0.84
SED1YDR077W YPR003CP53394 754 aa9.79□□□□□ -0.84
SED1YDR077W COP1P53622 1201 aaKnown RBP9.79□□□□□ -0.84
SED1YDR077W NMA111P53920 997 aa9.79□□□□□ -0.84
SED1YDR077W AAD15Q08361 143 aa9.79□□□□□ -0.84
SED1YDR077W YLR422WQ06409 1932 aa9.79□□□□□ -0.84
SED1YDR077W UBR2Q07963 1872 aa9.79□□□□□ -0.84
SED1YDR077W PRC1P00729 532 aa9.78□□□□□ -0.84
SED1YDR077W ILS1P09436 1072 aaKnown RBP9.78□□□□□ -0.84
SED1YDR077W DEP1P31385 405 aa9.78□□□□□ -0.84
SED1YDR077W LOS1P33418 1100 aaPredicted RBP9.78□□□□□ -0.84
SED1YDR077W PTC3P34221 468 aaKnown RBP9.78□□□□□ -0.84
Retrieved 100 of 5,963 RNA–protein pairs in 69.2 ms