RNA–Protein interactions for RNA: YDR073W

SNF11, Transcript of Subunit of the SWI/SNF chromatin remodeling complex, yeast

Gene SNF11, Length 510 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SNF11	YDR073W	YBR259W	P38338	688 aa		6.18	□□□□□ -1.42
SNF11	YDR073W	YNL195C	P40168	261 aa		6.18	□□□□□ -1.42
SNF11	YDR073W	AXL1	P40851	1208 aa		6.18	□□□□□ -1.42
SNF11	YDR073W	GSM1	P42950	618 aa		6.18	□□□□□ -1.42
SNF11	YDR073W	BST1	P43571	1029 aa		6.18	□□□□□ -1.42
SNF11	YDR073W	YML6	P51998	286 aa		6.18	□□□□□ -1.42
SNF11	YDR073W	SPO1	P53541	631 aa		6.18	□□□□□ -1.42
SNF11	YDR073W	SSY1	Q03770	852 aa		6.18	□□□□□ -1.42
SNF11	YDR073W	YOR111W	Q99210	232 aa		6.18	□□□□□ -1.42
SNF11	YDR073W	YLR415C	O13578	112 aa		6.17	□□□□□ -1.42
SNF11	YDR073W	SEC53	P07283	254 aa	Known RBP	6.17	□□□□□ -1.42
SNF11	YDR073W	CHS2	P14180	963 aa		6.17	□□□□□ -1.42
SNF11	YDR073W	OLE1	P21147	510 aa	Known RBP	6.17	□□□□□ -1.42
SNF11	YDR073W	SEC15	P22224	910 aa		6.17	□□□□□ -1.42
SNF11	YDR073W	KIN82	P25341	720 aa		6.17	□□□□□ -1.42
SNF11	YDR073W	RPC53	P25441	422 aa		6.17	□□□□□ -1.42
SNF11	YDR073W	PRE4	P30657	266 aa		6.17	□□□□□ -1.42
SNF11	YDR073W	MTH1	P35198	433 aa		6.17	□□□□□ -1.42
SNF11	YDR073W	SIC1	P38634	284 aa		6.17	□□□□□ -1.42
SNF11	YDR073W	YEL025C	P39991	1188 aa		6.17	□□□□□ -1.42
SNF11	YDR073W	YFL066C	P43538	392 aa		6.17	□□□□□ -1.42
SNF11	YDR073W	RMD8	P43620	662 aa		6.17	□□□□□ -1.42
SNF11	YDR073W	BIT61	P47041	543 aa		6.17	□□□□□ -1.42
SNF11	YDR073W	YPL071C	Q02864	156 aa		6.17	□□□□□ -1.42
SNF11	YDR073W	VPS64	Q03944	604 aa		6.17	□□□□□ -1.42
SNF11	YDR073W	THI72	Q08579	599 aa		6.17	□□□□□ -1.42
SNF11	YDR073W	GPB1	Q08886	897 aa		6.17	□□□□□ -1.42
SNF11	YDR073W	UPC2	Q12151	913 aa		6.17	□□□□□ -1.42
SNF11	YDR073W	MTC7	P32633	139 aa		6.16	□□□□□ -1.42
SNF11	YDR073W	MAC1	P35192	417 aa		6.16	□□□□□ -1.42
SNF11	YDR073W	ESL2	P36168	1195 aa		6.16	□□□□□ -1.42
SNF11	YDR073W	UTP9	P38882	575 aa	Known RBP	6.16	□□□□□ -1.42
SNF11	YDR073W	VFA1	P40080	203 aa		6.16	□□□□□ -1.42
SNF11	YDR073W	DUO1	P53168	247 aa	Known RBP	6.16	□□□□□ -1.42
SNF11	YDR073W	ARE2	P53629	642 aa	Known RBP	6.16	□□□□□ -1.42
SNF11	YDR073W	AIM41	Q12032	185 aa		6.16	□□□□□ -1.42
SNF11	YDR073W	PCD1	Q12524	340 aa		6.16	□□□□□ -1.42
SNF11	YDR073W	GAL10	P04397	699 aa		6.15	□□□□□ -1.42
SNF11	YDR073W	ARG3	P05150	338 aa		6.15	□□□□□ -1.42
SNF11	YDR073W	CTT1	P06115	562 aa		6.15	□□□□□ -1.42
SNF11	YDR073W	CDC24	P11433	854 aa	Predicted RBP	6.15	□□□□□ -1.42
SNF11	YDR073W	PDX1	P16451	410 aa		6.15	□□□□□ -1.42
SNF11	YDR073W	RNR1	P21524	888 aa	Known RBP	6.15	□□□□□ -1.42
SNF11	YDR073W	ECM32	P32644	1121 aa	Known RBP	6.15	□□□□□ -1.42
SNF11	YDR073W	YHR112C	P38716	378 aa		6.15	□□□□□ -1.42
SNF11	YDR073W	ECM1	P39715	212 aa		6.15	□□□□□ -1.42
SNF11	YDR073W	NPR2	P39923	615 aa		6.15	□□□□□ -1.42
SNF11	YDR073W	UBP7	P40453	1071 aa		6.15	□□□□□ -1.42
SNF11	YDR073W	IST3	P40565	148 aa	Predicted RBP	6.15	□□□□□ -1.42
SNF11	YDR073W	ARC1	P46672	376 aa	Known RBP	6.15	□□□□□ -1.42
SNF11	YDR073W	POL31	P46957	487 aa		6.15	□□□□□ -1.42
SNF11	YDR073W	COG1	P53079	417 aa		6.15	□□□□□ -1.42
SNF11	YDR073W	TPO1	Q07824	586 aa		6.15	□□□□□ -1.42
SNF11	YDR073W	PSK2	Q08217	1101 aa		6.15	□□□□□ -1.42
SNF11	YDR073W	YBR126W-A	Q8TGU7	68 aa		6.15	□□□□□ -1.42
SNF11	YDR073W	ECM3	Q99252	613 aa		6.15	□□□□□ -1.42
SNF11	YDR073W	CYC1	P00044	109 aa	Predicted RBP	6.14	□□□□□ -1.43
SNF11	YDR073W	TUF1	P02992	437 aa	Known RBP	6.14	□□□□□ -1.43
SNF11	YDR073W	MET17	P06106	444 aa		6.14	□□□□□ -1.43
SNF11	YDR073W	SEC12	P11655	471 aa		6.14	□□□□□ -1.43
SNF11	YDR073W	BIK1	P11709	440 aa		6.14	□□□□□ -1.43
SNF11	YDR073W	MSB1	P21339	1137 aa	Known RBP	6.14	□□□□□ -1.43
SNF11	YDR073W	PRE8	P23639	250 aa		6.14	□□□□□ -1.43
SNF11	YDR073W	RPS7A	P26786	190 aa	Known RBP	6.14	□□□□□ -1.43
SNF11	YDR073W	ANP1	P32629	500 aa		6.14	□□□□□ -1.43
SNF11	YDR073W	SAF1	P38352	637 aa		6.14	□□□□□ -1.43
SNF11	YDR073W	SFB3	P38810	929 aa		6.14	□□□□□ -1.43
SNF11	YDR073W	MSS4	P38994	779 aa		6.14	□□□□□ -1.43
SNF11	YDR073W	SLN1	P39928	1220 aa	Predicted RBP	6.14	□□□□□ -1.43
SNF11	YDR073W	URM1	P40554	99 aa	Predicted RBP	6.14	□□□□□ -1.43
SNF11	YDR073W	TRS31	Q03337	283 aa		6.14	□□□□□ -1.43
SNF11	YDR073W	YMR155W	Q03795	547 aa		6.14	□□□□□ -1.43
SNF11	YDR073W	HMO1	Q03973	246 aa	Known RBP	6.14	□□□□□ -1.43
SNF11	YDR073W	ARP9	Q05123	467 aa		6.14	□□□□□ -1.43
SNF11	YDR073W	TDA6	Q06466	467 aa		6.14	□□□□□ -1.43
SNF11	YDR073W	POM34	Q12445	299 aa		6.14	□□□□□ -1.43
SNF11	YDR073W	SWC3	P31376	625 aa		6.13	□□□□□ -1.43
SNF11	YDR073W	COQ2	P32378	372 aa		6.13	□□□□□ -1.43
SNF11	YDR073W	GCD7	P32502	381 aa	Predicted RBP	6.13	□□□□□ -1.43
SNF11	YDR073W	STE14	P32584	239 aa		6.13	□□□□□ -1.43
SNF11	YDR073W	YPT7	P32939	208 aa		6.13	□□□□□ -1.43
SNF11	YDR073W	CTF13	P35203	478 aa		6.13	□□□□□ -1.43
SNF11	YDR073W	YBL029W	P38201	376 aa		6.13	□□□□□ -1.43
SNF11	YDR073W	CAJ1	P39101	391 aa		6.13	□□□□□ -1.43
SNF11	YDR073W	JEM1	P40358	645 aa		6.13	□□□□□ -1.43
SNF11	YDR073W	LSB3	P43603	459 aa	Known RBP	6.13	□□□□□ -1.43
SNF11	YDR073W	SIP4	P46954	829 aa		6.13	□□□□□ -1.43
SNF11	YDR073W	PRY1	P47032	299 aa		6.13	□□□□□ -1.43
SNF11	YDR073W	ZAP1	P47043	880 aa		6.13	□□□□□ -1.43
SNF11	YDR073W	GTF1	P53260	183 aa	Predicted RBP	6.13	□□□□□ -1.43
SNF11	YDR073W	ADY4	Q05955	493 aa		6.13	□□□□□ -1.43
SNF11	YDR073W	ADY3	Q07732	790 aa		6.13	□□□□□ -1.43
SNF11	YDR073W	DIA2	Q08496	732 aa	Predicted RBP	6.13	□□□□□ -1.43
SNF11	YDR073W	YPR053C	Q6Q5F3	151 aa		6.13	□□□□□ -1.43
SNF11	YDR073W	TUB2	P02557	457 aa	Known RBP	6.12	□□□□□ -1.43
SNF11	YDR073W	SES1	P07284	462 aa	Known RBP	6.12	□□□□□ -1.43
SNF11	YDR073W	RPL19A	P0CX82	189 aa	Known RBP	6.12	□□□□□ -1.43
SNF11	YDR073W	RPL19B	P0CX83	189 aa	Predicted RBP	6.12	□□□□□ -1.43
SNF11	YDR073W	PET122	P10355	254 aa		6.12	□□□□□ -1.43
SNF11	YDR073W	SEC21	P32074	935 aa	Known RBP	6.12	□□□□□ -1.43

Retrieved 100 of 5,963 RNA–protein pairs in 21.5 ms