RNA–Protein interactions for RNA: YBR263W

SHM1, Transcript of Mitochondrial serine hydroxymethyltransferase, yeastyeast

Gene SHM1, Length 1,473 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHM1YBR263W EFB1P32471 206 aaKnown RBP5.98□□□□□ -1.45
SHM1YBR263W SLA2P33338 968 aa5.98□□□□□ -1.45
SHM1YBR263W HMT1P38074 348 aa5.98□□□□□ -1.45
SHM1YBR263W YBR284WP38150 797 aa5.98□□□□□ -1.45
SHM1YBR263W SHQ1P40486 507 aaPredicted RBP5.98□□□□□ -1.45
SHM1YBR263W CWC22P53333 577 aaKnown RBP5.98□□□□□ -1.45
SHM1YBR263W ERG5P54781 538 aa5.98□□□□□ -1.45
SHM1YBR263W MRI1Q06489 411 aaKnown RBP5.98□□□□□ -1.45
SHM1YBR263W SDH5Q08230 162 aa5.98□□□□□ -1.45
SHM1YBR263W MRN1Q08925 612 aaKnown RBP RIP-Chip data5.98□□□□□ -1.45not detected
SHM1YBR263W YDR034W-BQ6Q5X2 51 aa5.98□□□□□ -1.45
SHM1YBR263W LAA1P39526 2014 aa5.98□□□□□ -1.45
SHM1YBR263W POL3P15436 1097 aa5.97□□□□□ -1.45
SHM1YBR263W RRP43P25359 394 aaPredicted RBP5.97□□□□□ -1.45
SHM1YBR263W PEP7P32609 515 aa5.97□□□□□ -1.45
SHM1YBR263W JNM1P36224 373 aa5.97□□□□□ -1.45
SHM1YBR263W PCH2P38126 564 aa5.97□□□□□ -1.45
SHM1YBR263W EXO5P38289 585 aa5.97□□□□□ -1.45
SHM1YBR263W SMC2P38989 1170 aaKnown RBP5.97□□□□□ -1.45
SHM1YBR263W GEM1P39722 662 aa5.97□□□□□ -1.45
SHM1YBR263W DSE1P40077 573 aa5.97□□□□□ -1.45
SHM1YBR263W PHO86P46956 311 aa5.97□□□□□ -1.45
SHM1YBR263W NUT1P53114 1132 aa5.97□□□□□ -1.45
SHM1YBR263W YGL036WP53185 909 aaPredicted RBP5.97□□□□□ -1.45
SHM1YBR263W YNL034WP53963 612 aa5.97□□□□□ -1.45
SHM1YBR263W YNL018CP53976 612 aa5.97□□□□□ -1.45
SHM1YBR263W YOL098CQ12496 1037 aa5.97□□□□□ -1.45
SHM1YBR263W YLR422WQ06409 1932 aa5.97□□□□□ -1.45
SHM1YBR263W RPS3P05750 240 aaKnown RBP5.96□□□□□ -1.45
SHM1YBR263W SNF1P06782 633 aaKnown RBP5.96□□□□□ -1.45
SHM1YBR263W CYC8P14922 966 aa5.96□□□□□ -1.45
SHM1YBR263W SAT4P25333 603 aaKnown RBP5.96□□□□□ -1.45
SHM1YBR263W VBA3P25594 458 aa5.96□□□□□ -1.45
SHM1YBR263W GAC1P28006 793 aa5.96□□□□□ -1.45
SHM1YBR263W FRE1P32791 686 aa5.96□□□□□ -1.45
SHM1YBR263W DEF1P35732 738 aaKnown RBP5.96□□□□□ -1.45
SHM1YBR263W KDX1P36005 433 aa5.96□□□□□ -1.45
SHM1YBR263W VBA5P36172 582 aa5.96□□□□□ -1.45
SHM1YBR263W BOL3P39724 118 aa5.96□□□□□ -1.45
SHM1YBR263W YIR016WP40572 265 aa5.96□□□□□ -1.45
SHM1YBR263W YJR054WP47114 497 aa5.96□□□□□ -1.45
SHM1YBR263W PUS2P53167 370 aa5.96□□□□□ -1.45
SHM1YBR263W SDH1Q00711 640 aa5.96□□□□□ -1.45
SHM1YBR263W MUB1Q03162 620 aa5.96□□□□□ -1.45
SHM1YBR263W MZM1Q03429 123 aaPredicted RBP5.96□□□□□ -1.45
SHM1YBR263W APM4Q99186 491 aa5.96□□□□□ -1.45
SHM1YBR263W FUR4P05316 633 aaKnown RBP5.96□□□□□ -1.46
SHM1YBR263W ATP1P07251 545 aaKnown RBP5.96□□□□□ -1.46
SHM1YBR263W YER152CP10356 443 aa5.96□□□□□ -1.46
SHM1YBR263W MTF2P10849 440 aa5.96□□□□□ -1.46
SHM1YBR263W VPH1P32563 840 aaKnown RBP5.96□□□□□ -1.46
SHM1YBR263W NOP4P37838 685 aaKnown RBP5.96□□□□□ -1.46
SHM1YBR263W YMC2P38087 329 aa5.96□□□□□ -1.46
SHM1YBR263W CCC2P38995 1004 aa5.96□□□□□ -1.46
SHM1YBR263W ASG7P46993 209 aa5.96□□□□□ -1.46
SHM1YBR263W MND1P53102 219 aa5.96□□□□□ -1.46
SHM1YBR263W YNL011CP53980 444 aa5.96□□□□□ -1.46
SHM1YBR263W GPD1Q00055 391 aaKnown RBP5.96□□□□□ -1.46
SHM1YBR263W VPS38Q05919 439 aa5.96□□□□□ -1.46
SHM1YBR263W YCG1Q06680 1035 aa5.96□□□□□ -1.46
SHM1YBR263W TSR1Q07381 788 aaKnown RBP5.96□□□□□ -1.46
SHM1YBR263W TRE1Q08919 783 aa5.96□□□□□ -1.46
SHM1YBR263W RAD27P26793 382 aa5.95□□□□□ -1.46
SHM1YBR263W SPC110P32380 944 aa5.95□□□□□ -1.46
SHM1YBR263W YKL050CP35736 922 aa5.95□□□□□ -1.46
SHM1YBR263W SIF2P38262 535 aa5.95□□□□□ -1.46
SHM1YBR263W SHE3P38272 425 aaKnown RBP5.95□□□□□ -1.46
SHM1YBR263W PCM1P38628 557 aaKnown RBP5.95□□□□□ -1.46
SHM1YBR263W SET5P38890 526 aaKnown RBP5.95□□□□□ -1.46
SHM1YBR263W YMR124WP39523 943 aaKnown RBP5.95□□□□□ -1.46
SHM1YBR263W YEL075CP39972 122 aa5.95□□□□□ -1.46
SHM1YBR263W MMF1P40185 145 aaKnown RBP5.95□□□□□ -1.46
SHM1YBR263W YTA12P40341 825 aa5.95□□□□□ -1.46
SHM1YBR263W MAF1P41910 395 aa5.95□□□□□ -1.46
SHM1YBR263W ALF1P53904 254 aa5.95□□□□□ -1.46
SHM1YBR263W SLG1P54867 378 aa5.95□□□□□ -1.46
SHM1YBR263W CTR9P89105 1077 aa5.95□□□□□ -1.46
SHM1YBR263W ADA2Q02336 434 aa5.95□□□□□ -1.46
SHM1YBR263W UTP5Q04177 643 aaKnown RBP5.95□□□□□ -1.46
SHM1YBR263W YDR222WQ04925 415 aa5.95□□□□□ -1.46
SHM1YBR263W SIL1Q08199 421 aa5.95□□□□□ -1.46
SHM1YBR263W BI2P03873 423 aa5.94□□□□□ -1.46
SHM1YBR263W BI4P03879 638 aa5.94□□□□□ -1.46
SHM1YBR263W GCD1P09032 578 aaPredicted RBP5.94□□□□□ -1.46
SHM1YBR263W MAS1P10507 462 aa5.94□□□□□ -1.46
SHM1YBR263W RAD57P25301 460 aa5.94□□□□□ -1.46
SHM1YBR263W GYP6P32806 458 aa5.94□□□□□ -1.46
SHM1YBR263W MRP4P32902 394 aa5.94□□□□□ -1.46
SHM1YBR263W TKL2P33315 681 aa5.94□□□□□ -1.46
SHM1YBR263W OSW7P43611 510 aa5.94□□□□□ -1.46
SHM1YBR263W OPY2Q06810 360 aa5.94□□□□□ -1.46
SHM1YBR263W LEA1Q08963 238 aaPredicted RBP5.94□□□□□ -1.46
SHM1YBR263W GPM2Q12008 311 aa5.94□□□□□ -1.46
SHM1YBR263W VPS54Q12071 889 aa5.94□□□□□ -1.46
SHM1YBR263W MNL2Q12205 849 aa5.94□□□□□ -1.46
SHM1YBR263W HRT3Q12347 344 aa5.94□□□□□ -1.46
SHM1YBR263W BI3Q9ZZW7 517 aa5.94□□□□□ -1.46
SHM1YBR263W ERG11P10614 530 aa5.93□□□□□ -1.46
SHM1YBR263W SEC23P15303 768 aaKnown RBP5.93□□□□□ -1.46
SHM1YBR263W EST1P17214 699 aaPredicted RBP5.93□□□□□ -1.46
Retrieved 100 of 5,963 RNA–protein pairs in 19.3 ms