RNA–Protein interactions for RNA: YBR028C

YPK3, Transcript of AGC kinase, yeast

Gene YPK3, Length 1,578 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YPK3	YBR028C	MRPL7	P36519	292 aa		5.46	□□□□□ -1.54
YPK3	YBR028C	UBA2	P52488	636 aa		5.46	□□□□□ -1.54
YPK3	YBR028C	PAP2	P53632	584 aa	Known RBP	5.46	□□□□□ -1.54
YPK3	YBR028C	ATG4	P53867	494 aa		5.46	□□□□□ -1.54
YPK3	YBR028C	YSH1	Q06224	779 aa	Predicted RBP	5.46	□□□□□ -1.54
YPK3	YBR028C	TAF5	P38129	798 aa		5.45	□□□□□ -1.54
YPK3	YBR028C	APM3	P38153	483 aa		5.45	□□□□□ -1.54
YPK3	YBR028C	CBR1	P38626	284 aa	Known RBP	5.45	□□□□□ -1.54
YPK3	YBR028C	YLF2	P38746	405 aa		5.45	□□□□□ -1.54
YPK3	YBR028C	SPC72	P39723	622 aa		5.45	□□□□□ -1.54
YPK3	YBR028C	GSM1	P42950	618 aa		5.45	□□□□□ -1.54
YPK3	YBR028C	STB4	P50104	949 aa		5.45	□□□□□ -1.54
YPK3	YBR028C	YGR021W	P53212	290 aa		5.45	□□□□□ -1.54
YPK3	YBR028C	CIA1	Q05583	330 aa		5.45	□□□□□ -1.54
YPK3	YBR028C	TOP1	P04786	769 aa		5.44	□□□□□ -1.54
YPK3	YBR028C	PCK1	P10963	549 aa		5.44	□□□□□ -1.54
YPK3	YBR028C	VPS33	P20795	691 aa		5.44	□□□□□ -1.54
YPK3	YBR028C	DBF20	P32328	564 aa		5.44	□□□□□ -1.54
YPK3	YBR028C	KSP1	P38691	1029 aa	Known RBP	5.44	□□□□□ -1.54
YPK3	YBR028C	STT3	P39007	718 aa	Known RBP	5.44	□□□□□ -1.54
YPK3	YBR028C	YEL025C	P39991	1188 aa		5.44	□□□□□ -1.54
YPK3	YBR028C	NDC80	P40460	691 aa		5.44	□□□□□ -1.54
YPK3	YBR028C	ACS1	Q01574	713 aa		5.44	□□□□□ -1.54
YPK3	YBR028C	VMS1	Q04311	632 aa	Known RBP	5.44	□□□□□ -1.54
YPK3	YBR028C	EIS1	Q05050	843 aa	Known RBP	5.44	□□□□□ -1.54
YPK3	YBR028C	ACF2	Q12168	779 aa		5.44	□□□□□ -1.54
YPK3	YBR028C	ABF1	P14164	731 aa		5.43	□□□□□ -1.54
YPK3	YBR028C	TRX2	P22803	104 aa	Known RBP	5.43	□□□□□ -1.54
YPK3	YBR028C	MSH1	P25846	959 aa		5.43	□□□□□ -1.54
YPK3	YBR028C	PPE1	P38796	400 aa		5.43	□□□□□ -1.54
YPK3	YBR028C	YJL193W	P39542	402 aa		5.43	□□□□□ -1.54
YPK3	YBR028C	NMA2	P53204	395 aa		5.43	□□□□□ -1.54
YPK3	YBR028C	DIP5	P53388	608 aa		5.43	□□□□□ -1.54
YPK3	YBR028C	EFR3	Q03653	782 aa	Known RBP	5.43	□□□□□ -1.54
YPK3	YBR028C	RKI1	Q12189	258 aa		5.43	□□□□□ -1.54
YPK3	YBR028C	PHO81	P17442	1178 aa		5.42	□□□□□ -1.54
YPK3	YBR028C	STB5	P38699	743 aa		5.42	□□□□□ -1.54
YPK3	YBR028C	FRD1	P32614	470 aa	Known RBP	5.42	□□□□□ -1.54
YPK3	YBR028C	ARG2	P40360	574 aa		5.42	□□□□□ -1.54
YPK3	YBR028C	ERR3	P42222	437 aa		5.42	□□□□□ -1.54
YPK3	YBR028C	CCT7	P42943	550 aa	Known RBP	5.42	□□□□□ -1.54
YPK3	YBR028C	GSF2	Q04697	403 aa	Known RBP	5.42	□□□□□ -1.54
YPK3	YBR028C	AAD4	Q07747	329 aa		5.42	□□□□□ -1.54
YPK3	YBR028C	SIR1	P21691	654 aa		5.41	□□□□□ -1.54
YPK3	YBR028C	MSM1	P22438	575 aa		5.41	□□□□□ -1.54
YPK3	YBR028C	POL31	P46957	487 aa		5.41	□□□□□ -1.54
YPK3	YBR028C	CPR6	P53691	371 aa	Known RBP	5.41	□□□□□ -1.54
YPK3	YBR028C	UFO1	Q04511	668 aa		5.41	□□□□□ -1.54
YPK3	YBR028C	HOF1	Q05080	669 aa		5.41	□□□□□ -1.54
YPK3	YBR028C	ENT2	Q05785	613 aa		5.41	□□□□□ -1.54
YPK3	YBR028C	SEC12	P11655	471 aa		5.4	□□□□□ -1.55
YPK3	YBR028C	PRP45	P28004	379 aa	Predicted RBP	5.4	□□□□□ -1.55
YPK3	YBR028C	DSS4	P32601	143 aa		5.4	□□□□□ -1.55
YPK3	YBR028C	PTH2	P34222	208 aa		5.4	□□□□□ -1.55
YPK3	YBR028C	APL3	P38065	1025 aa		5.4	□□□□□ -1.55
YPK3	YBR028C	MOH1	P38191	138 aa		5.4	□□□□□ -1.55
YPK3	YBR028C	VPS27	P40343	622 aa	Known RBP	5.4	□□□□□ -1.55
YPK3	YBR028C	SDS3	P40505	327 aa		5.4	□□□□□ -1.55
YPK3	YBR028C	CTR1	P49573	406 aa		5.4	□□□□□ -1.55
YPK3	YBR028C	CTF4	Q01454	927 aa		5.4	□□□□□ -1.55
YPK3	YBR028C	TRS31	Q03337	283 aa		5.4	□□□□□ -1.55
YPK3	YBR028C	CEF1	Q03654	590 aa	Predicted RBP	5.4	□□□□□ -1.55
YPK3	YBR028C	CRD1	Q07560	283 aa		5.4	□□□□□ -1.55
YPK3	YBR028C	HBT1	Q07653	1046 aa	Known RBP	5.4	□□□□□ -1.55
YPK3	YBR028C	BMS1	Q08965	1183 aa	Known RBP	5.4	□□□□□ -1.55
YPK3	YBR028C	LAM4	P38800	1345 aa		5.4	□□□□□ -1.55
YPK3	YBR028C	PHO5	P00635	467 aa		5.39	□□□□□ -1.55
YPK3	YBR028C	STE4	P18851	423 aa		5.39	□□□□□ -1.55
YPK3	YBR028C	MCM3	P24279	971 aa	Known RBP	5.39	□□□□□ -1.55
YPK3	YBR028C	MRS6	P32864	603 aa	Known RBP	5.39	□□□□□ -1.55
YPK3	YBR028C	DHR2	P36009	735 aa	Predicted RBP	5.39	□□□□□ -1.55
YPK3	YBR028C	SAP185	P40856	1058 aa		5.39	□□□□□ -1.55
YPK3	YBR028C	COS12	P53053	380 aa		5.39	□□□□□ -1.55
YPK3	YBR028C	POL3	P15436	1097 aa		5.38	□□□□□ -1.55
YPK3	YBR028C	OAR1	P35731	278 aa		5.38	□□□□□ -1.55
YPK3	YBR028C	GLG1	P36143	616 aa		5.38	□□□□□ -1.55
YPK3	YBR028C	EXO84	P38261	753 aa		5.38	□□□□□ -1.55
YPK3	YBR028C	BDH2	P39713	417 aa		5.38	□□□□□ -1.55
YPK3	YBR028C	RPS15	Q01855	142 aa	Known RBP	5.38	□□□□□ -1.55
YPK3	YBR028C	TAF3	Q12297	353 aa		5.38	□□□□□ -1.55
YPK3	YBR028C	SWI4	P25302	1093 aa	Known RBP	5.38	□□□□□ -1.55
YPK3	YBR028C	RPS7A	P26786	190 aa	Known RBP	5.38	□□□□□ -1.55
YPK3	YBR028C	CAP1	P28495	268 aa	Known RBP	5.38	□□□□□ -1.55
YPK3	YBR028C	GMH1	P36125	273 aa		5.38	□□□□□ -1.55
YPK3	YBR028C	YJL206C	P39529	758 aa		5.38	□□□□□ -1.55
YPK3	YBR028C	VFA1	P40080	203 aa		5.38	□□□□□ -1.55
YPK3	YBR028C	PUG1	P40100	303 aa		5.38	□□□□□ -1.55
YPK3	YBR028C	YIP4	P53093	235 aa		5.38	□□□□□ -1.55
YPK3	YBR028C	ARC35	P53731	342 aa	Known RBP	5.38	□□□□□ -1.55
YPK3	YBR028C	TIM44	Q01852	431 aa		5.38	□□□□□ -1.55
YPK3	YBR028C	MFM1	Q02783	413 aa		5.38	□□□□□ -1.55
YPK3	YBR028C	USA1	Q03714	838 aa		5.38	□□□□□ -1.55
YPK3	YBR028C	TMN2	Q04562	672 aa		5.38	□□□□□ -1.55
YPK3	YBR028C	IWR1	Q07532	353 aa	Predicted RBP	5.38	□□□□□ -1.55
YPK3	YBR028C	NCP1	P16603	691 aa	Known RBP	5.37	□□□□□ -1.55
YPK3	YBR028C	PRE2	P30656	287 aa	Known RBP	5.37	□□□□□ -1.55
YPK3	YBR028C	YBR138C	P38277	524 aa		5.37	□□□□□ -1.55
YPK3	YBR028C	GND2	P53319	492 aa		5.37	□□□□□ -1.55
YPK3	YBR028C	TRS23	Q03784	219 aa		5.37	□□□□□ -1.55
YPK3	YBR028C	ADE3	P07245	946 aa	Known RBP	5.36	□□□□□ -1.55

Retrieved 100 of 5,963 RNA–protein pairs in 11.2 ms