RNA–Protein interactions for RNA: ENST00000641421.1

CASC19-230, Transcript of cancer susceptibility 19, humanhuman

BASIC

Gene CASC19, Length 1,530 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-230ENST00000641421 TMEM67Q5HYA8 995 aa12.48□□□□□ -0.41
CASC19-230ENST00000641421 NKX2-3Q8TAU0 364 aa12.48□□□□□ -0.41
CASC19-230ENST00000641421 LEO1Q8WVC0 666 aaPredicted RBP12.48□□□□□ -0.41
CASC19-230ENST00000641421 STAG1Q8WVM7 1258 aa12.48□□□□□ -0.41
CASC19-230ENST00000641421 RPGRQ92834 1020 aaKnown RBP12.48□□□□□ -0.41
CASC19-230ENST00000641421 SPATA32Q96LK8 384 aa12.48□□□□□ -0.41
CASC19-230ENST00000641421 RBSNQ9H1K0 784 aa12.48□□□□□ -0.41
CASC19-230ENST00000641421 TSPY26PQ9H489 355 aa12.48□□□□□ -0.41
CASC19-230ENST00000641421 RNF41Q9H4P4 317 aaPredicted RBP12.48□□□□□ -0.41
CASC19-230ENST00000641421 TFIP11Q9UBB9 837 aaKnown RBP12.48□□□□□ -0.41
CASC19-230ENST00000641421 LEMD3Q9Y2U8 911 aa12.48□□□□□ -0.41
CASC19-230ENST00000641421 BRWD3Q6RI45 1802 aa12.48□□□□□ -0.41
CASC19-230ENST00000641421 KDM4AO75164 1064 aa12.47□□□□□ -0.41
CASC19-230ENST00000641421 SERPINB2P05120 415 aa12.47□□□□□ -0.41
CASC19-230ENST00000641421 FDPSP14324 419 aaKnown RBP12.47□□□□□ -0.41
CASC19-230ENST00000641421 CHAF1AQ13111 956 aaPredicted RBP12.47□□□□□ -0.41
CASC19-230ENST00000641421 NFXL1Q6ZNB6 911 aa12.47□□□□□ -0.41
CASC19-230ENST00000641421 RAB11FIP4Q86YS3 637 aa12.47□□□□□ -0.41
CASC19-230ENST00000641421 IGDCC4Q8TDY8 1250 aa12.47□□□□□ -0.41
CASC19-230ENST00000641421 ANP32BQ92688 251 aaKnown RBP12.47□□□□□ -0.41
CASC19-230ENST00000641421 RIOK1Q9BRS2 568 aaKnown RBP12.47□□□□□ -0.41
CASC19-230ENST00000641421 INCENPQ9NQS7 918 aa12.47□□□□□ -0.41
CASC19-230ENST00000641421 TOMM22Q9NS69 142 aa12.47□□□□□ -0.41
CASC19-230ENST00000641421 ANKIB1Q9P2G1 1089 aa12.47□□□□□ -0.41
CASC19-230ENST00000641421 ORC3Q9UBD5 711 aaPredicted RBP12.47□□□□□ -0.41
CASC19-230ENST00000641421 TACC3Q9Y6A5 838 aa12.47□□□□□ -0.41
CASC19-230ENST00000641421 CACNA1SQ13698 1873 aa12.47□□□□□ -0.41
CASC19-230ENST00000641421 GOLGA6L4A6NEF3 574 aa12.47□□□□□ -0.41
CASC19-230ENST00000641421 IFIT3O14879 490 aaKnown RBP12.47□□□□□ -0.41
CASC19-230ENST00000641421 PPFIA3O75145 1194 aa12.47□□□□□ -0.41
CASC19-230ENST00000641421 METAP2P50579 478 aaKnown RBP eCLIP12.47□□□□□ -0.41
CASC19-230ENST00000641421 DYNLL1P63167 89 aaKnown RBP12.47□□□□□ -0.41
CASC19-230ENST00000641421 PPARAQ07869 468 aa12.47□□□□□ -0.41
CASC19-230ENST00000641421 TXNRD1Q16881 649 aa12.47□□□□□ -0.41
CASC19-230ENST00000641421 RRP12Q5JTH9 1297 aaKnown RBP12.47□□□□□ -0.41
CASC19-230ENST00000641421 CPLX2Q6PUV4 134 aaKnown RBP12.47□□□□□ -0.41
CASC19-230ENST00000641421 APOA5Q6Q788 366 aa12.47□□□□□ -0.41
CASC19-230ENST00000641421 SGMS1Q86VZ5 419 aa12.47□□□□□ -0.41
CASC19-230ENST00000641421 SDR42E1Q8WUS8 393 aa12.47□□□□□ -0.41
CASC19-230ENST00000641421 RBM17Q96I25 401 aaKnown RBP12.47□□□□□ -0.41
CASC19-230ENST00000641421 BRIP1Q9BX63 1249 aa12.47□□□□□ -0.41
CASC19-230ENST00000641421 LY9Q9HBG7 655 aa12.47□□□□□ -0.41
CASC19-230ENST00000641421 ZSWIM5Q9P217 1185 aa12.47□□□□□ -0.41
CASC19-230ENST00000641421 CFAP45Q9UL16 551 aa12.47□□□□□ -0.41
CASC19-230ENST00000641421 XDHP47989 1333 aa12.46□□□□□ -0.41
CASC19-230ENST00000641421 IRS2Q9Y4H2 1338 aa12.46□□□□□ -0.41
CASC19-230ENST00000641421 ZBTB43O43298 467 aa12.46□□□□□ -0.42
CASC19-230ENST00000641421 CDKL5O76039 1030 aa12.46□□□□□ -0.42
CASC19-230ENST00000641421 LIFRP42702 1097 aa12.46□□□□□ -0.42
CASC19-230ENST00000641421 GUCY1B3Q02153 619 aa12.46□□□□□ -0.42
CASC19-230ENST00000641421 MECOMQ03112 1051 aa12.46□□□□□ -0.42
CASC19-230ENST00000641421 SPTY2D1Q68D10 685 aaPredicted RBP12.46□□□□□ -0.42
CASC19-230ENST00000641421 ATL3Q6DD88 541 aa12.46□□□□□ -0.42
CASC19-230ENST00000641421 TMED8Q6PL24 325 aaPredicted RBP12.46□□□□□ -0.42
CASC19-230ENST00000641421 TXNRD3Q86VQ6 643 aa12.46□□□□□ -0.42
CASC19-230ENST00000641421 ZNF384Q8TF68 577 aa12.46□□□□□ -0.42
CASC19-230ENST00000641421 NSUN4Q96CB9 384 aaKnown RBP12.46□□□□□ -0.42
CASC19-230ENST00000641421 C8orf76Q96K31 380 aa12.46□□□□□ -0.42
CASC19-230ENST00000641421 ZNF396Q96N95 335 aaPredicted RBP12.46□□□□□ -0.42
CASC19-230ENST00000641421 MTA3Q9BTC8 594 aa12.46□□□□□ -0.42
CASC19-230ENST00000641421 ANAPC4Q9UJX5 808 aa12.46□□□□□ -0.42
CASC19-230ENST00000641421 CCDC69A6NI79 296 aa12.45□□□□□ -0.42
CASC19-230ENST00000641421 GOLGA8AA7E2F4 631 aa12.45□□□□□ -0.42
CASC19-230ENST00000641421 MINDY4BA8MYZ0 360 aa12.45□□□□□ -0.42
CASC19-230ENST00000641421 RBM6P78332 1123 aaKnown RBP12.45□□□□□ -0.42
CASC19-230ENST00000641421 CCDC173Q0VFZ6 552 aa12.45□□□□□ -0.42
CASC19-230ENST00000641421 SART3Q15020 963 aaKnown RBP12.45□□□□□ -0.42
CASC19-230ENST00000641421 CRY2Q49AN0 593 aa12.45□□□□□ -0.42
CASC19-230ENST00000641421 GIMAP6Q6P9H5 292 aa12.45□□□□□ -0.42
CASC19-230ENST00000641421 SYNE3Q6ZMZ3 975 aa12.45□□□□□ -0.42
CASC19-230ENST00000641421 ZNF804AQ7Z570 1209 aa12.45□□□□□ -0.42
CASC19-230ENST00000641421 KLHL34Q8N239 644 aa12.45□□□□□ -0.42
CASC19-230ENST00000641421 SENP2Q9HC62 589 aa12.45□□□□□ -0.42
CASC19-230ENST00000641421 CHD4Q14839 1912 aa12.44□□□□□ -0.42
CASC19-230ENST00000641421 ERICH2A1L162 156 aa12.44□□□□□ -0.42
CASC19-230ENST00000641421 IGSF3O75054 1194 aa12.44□□□□□ -0.42
CASC19-230ENST00000641421 ADD1P35611 737 aaKnown RBP12.44□□□□□ -0.42
CASC19-230ENST00000641421 ZNF772Q68DY9 489 aaPredicted RBP12.44□□□□□ -0.42
CASC19-230ENST00000641421 C15orf52Q6ZUT6 534 aaKnown RBP12.44□□□□□ -0.42
CASC19-230ENST00000641421 MICU3Q86XE3 530 aa12.44□□□□□ -0.42
CASC19-230ENST00000641421 STK11IPQ8N1F8 1099 aa12.44□□□□□ -0.42
CASC19-230ENST00000641421 PROM2Q8N271 834 aa12.44□□□□□ -0.42
CASC19-230ENST00000641421 RGS22Q8NE09 1264 aa12.44□□□□□ -0.42
CASC19-230ENST00000641421 WDR66Q8TBY9 1149 aa12.44□□□□□ -0.42
CASC19-230ENST00000641421 CRNKL1Q9BZJ0 848 aaKnown RBP12.44□□□□□ -0.42
CASC19-230ENST00000641421 SLC12A7Q9Y666 1083 aa12.44□□□□□ -0.42
CASC19-230ENST00000641421 MYH13Q9UKX3 1938 aa12.44□□□□□ -0.42
CASC19-230ENST00000641421 POLRMTO00411 1230 aaKnown RBP12.43□□□□□ -0.42
CASC19-230ENST00000641421 RXRAP19793 462 aa12.43□□□□□ -0.42
CASC19-230ENST00000641421 ATP2B4P23634 1241 aa12.43□□□□□ -0.42
CASC19-230ENST00000641421 PRDX5P30044 214 aa12.43□□□□□ -0.42
CASC19-230ENST00000641421 GPSM2P81274 684 aa12.43□□□□□ -0.42
CASC19-230ENST00000641421 DDR1Q08345 913 aa12.43□□□□□ -0.42
CASC19-230ENST00000641421 WTAPQ15007 396 aa12.43□□□□□ -0.42
CASC19-230ENST00000641421 TMTC2Q8N394 836 aa12.43□□□□□ -0.42
CASC19-230ENST00000641421 FBXO18Q8NFZ0 1043 aa12.43□□□□□ -0.42
CASC19-230ENST00000641421 TDRD7Q8NHU6 1098 aaKnown RBP12.43□□□□□ -0.42
CASC19-230ENST00000641421 ESR2Q92731 530 aa12.43□□□□□ -0.42
CASC19-230ENST00000641421 RCOR1Q9UKL0 485 aa12.43□□□□□ -0.42
CASC19-230ENST00000641421 MAST2Q6P0Q8 1798 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 114.5 ms