RNA–Protein interactions for RNA: ENST00000639599.1

TARDBP-231, Transcript of TAR DNA binding protein, human

TSL 5

Gene TARDBP, Length 1,283 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TARDBP-231	ENST00000639599	SEMA3E	O15041	775 aa		18.23	■□□□□ 0.51
TARDBP-231	ENST00000639599	MIGA2	Q7L4E1	593 aa		18.23	■□□□□ 0.51
TARDBP-231	ENST00000639599	NBPF11	Q86T75	865 aa		18.23	■□□□□ 0.51
TARDBP-231	ENST00000639599	DZIP1	Q86YF9	867 aa	Known RBP	18.23	■□□□□ 0.51
TARDBP-231	ENST00000639599	FAM151A	Q8WW52	585 aa		18.23	■□□□□ 0.51
TARDBP-231	ENST00000639599	SNCAIP	Q9Y6H5	919 aa		18.23	■□□□□ 0.51
TARDBP-231	ENST00000639599	GNAI3	P08754	354 aa		18.22	■□□□□ 0.51
TARDBP-231	ENST00000639599	PPIL2	Q13356	520 aa		18.22	■□□□□ 0.51
TARDBP-231	ENST00000639599	DIXDC1	Q155Q3	683 aa		18.22	■□□□□ 0.51
TARDBP-231	ENST00000639599	ATG9A	Q7Z3C6	839 aa		18.22	■□□□□ 0.51
TARDBP-231	ENST00000639599	SLF2	Q8IX21	1173 aa		18.22	■□□□□ 0.51
TARDBP-231	ENST00000639599	FAM43A	Q8N2R8	423 aa		18.22	■□□□□ 0.51
TARDBP-231	ENST00000639599	USP40	Q9NVE5	1235 aa		18.22	■□□□□ 0.51
TARDBP-231	ENST00000639599	DAGLA	Q9Y4D2	1042 aa		18.22	■□□□□ 0.51
TARDBP-231	ENST00000639599	PRDX5	P30044	214 aa		18.21	■□□□□ 0.51
TARDBP-231	ENST00000639599	PPAT	Q06203	517 aa		18.21	■□□□□ 0.51
TARDBP-231	ENST00000639599	SLC9C1	Q4G0N8	1177 aa		18.21	■□□□□ 0.51
TARDBP-231	ENST00000639599	ZCCHC17	Q9NP64	241 aa	Known RBP	18.21	■□□□□ 0.51
TARDBP-231	ENST00000639599	AKAP2	Q9Y2D5	859 aa		18.21	■□□□□ 0.51
TARDBP-231	ENST00000639599	IRF6	O14896	467 aa		18.2	■□□□□ 0.5
TARDBP-231	ENST00000639599	IPO8	O15397	1037 aa	Known RBP	18.2	■□□□□ 0.5
TARDBP-231	ENST00000639599	CDC42EP5	Q6NZY7	148 aa		18.2	■□□□□ 0.5
TARDBP-231	ENST00000639599	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	18.2	■□□□□ 0.5
TARDBP-231	ENST00000639599	ABCF2	Q9UG63	623 aa		18.2	■□□□□ 0.5
TARDBP-231	ENST00000639599	PA2G4	Q9UQ80	394 aa	Known RBP	18.2	■□□□□ 0.5
TARDBP-231	ENST00000639599	BTBD19	C9JJ37	291 aa		18.19	■□□□□ 0.5
TARDBP-231	ENST00000639599	SRGAP3	O43295	1099 aa		18.19	■□□□□ 0.5
TARDBP-231	ENST00000639599	PHKA1	P46020	1223 aa		18.19	■□□□□ 0.5
TARDBP-231	ENST00000639599	SLC4A8	Q2Y0W8	1093 aa		18.19	■□□□□ 0.5
TARDBP-231	ENST00000639599	GORAB	Q5T7V8	394 aa		18.19	■□□□□ 0.5
TARDBP-231	ENST00000639599	SPTY2D1	Q68D10	685 aa	Predicted RBP	18.19	■□□□□ 0.5
TARDBP-231	ENST00000639599	MEIS3	Q99687	375 aa		18.19	■□□□□ 0.5
TARDBP-231	ENST00000639599	SALL1	Q9NSC2	1324 aa		18.19	■□□□□ 0.5
TARDBP-231	ENST00000639599	CCER2	I3L3R5	266 aa		18.18	■□□□□ 0.5
TARDBP-231	ENST00000639599	TLR2	O60603	784 aa		18.18	■□□□□ 0.5
TARDBP-231	ENST00000639599	MVP	Q14764	893 aa	Known RBP	18.18	■□□□□ 0.5
TARDBP-231	ENST00000639599	CCDC102B	Q68D86	513 aa		18.18	■□□□□ 0.5
TARDBP-231	ENST00000639599	TRMT2A	Q8IZ69	625 aa	Known RBP	18.18	■□□□□ 0.5
TARDBP-231	ENST00000639599	GOLGA6L2	Q8N9W4	650 aa	Predicted RBP	18.18	■□□□□ 0.5
TARDBP-231	ENST00000639599	COPRS	Q9NQ92	184 aa		18.18	■□□□□ 0.5
TARDBP-231	ENST00000639599	INPP5B	P32019	993 aa		18.17	■□□□□ 0.5
TARDBP-231	ENST00000639599	RARS	P54136	660 aa	Known RBP	18.17	■□□□□ 0.5
TARDBP-231	ENST00000639599	ARHGAP45	Q92619	1136 aa		18.17	■□□□□ 0.5
TARDBP-231	ENST00000639599	FRAT1	Q92837	279 aa	Predicted RBP	18.17	■□□□□ 0.5
TARDBP-231	ENST00000639599	ARMC5	Q96C12	935 aa		18.17	■□□□□ 0.5
TARDBP-231	ENST00000639599	GCC1	Q96CN9	775 aa		18.17	■□□□□ 0.5
TARDBP-231	ENST00000639599	NEUROD6	Q96NK8	337 aa		18.17	■□□□□ 0.5
TARDBP-231	ENST00000639599	PICK1	Q9NRD5	415 aa		18.17	■□□□□ 0.5
TARDBP-231	ENST00000639599	PTCH2	Q9Y6C5	1203 aa		18.17	■□□□□ 0.5
TARDBP-231	ENST00000639599	POTEF	A5A3E0	1075 aa		18.16	■□□□□ 0.5
TARDBP-231	ENST00000639599	ECM2	O94769	699 aa	Predicted RBP	18.16	■□□□□ 0.5
TARDBP-231	ENST00000639599	GNRH1	P01148	92 aa		18.16	■□□□□ 0.5
TARDBP-231	ENST00000639599	NFIA	Q12857	509 aa		18.16	■□□□□ 0.5
TARDBP-231	ENST00000639599	OTOF	Q9HC10	1997 aa		18.16	■□□□□ 0.5
TARDBP-231	ENST00000639599		A0A1B0GUL7	405 aa		18.15	■□□□□ 0.5
TARDBP-231	ENST00000639599	MYC	P01106	439 aa	Predicted RBP	18.15	■□□□□ 0.5
TARDBP-231	ENST00000639599	HOXD10	P28358	340 aa		18.15	■□□□□ 0.5
TARDBP-231	ENST00000639599	ADORA1	P30542	326 aa		18.15	■□□□□ 0.5
TARDBP-231	ENST00000639599	LACTB	P83111	547 aa	Predicted RBP	18.15	■□□□□ 0.5
TARDBP-231	ENST00000639599	ERICH6	Q7L0X2	663 aa		18.15	■□□□□ 0.5
TARDBP-231	ENST00000639599	ANKRD23	Q86SG2	305 aa		18.15	■□□□□ 0.5
TARDBP-231	ENST00000639599	PARK7	Q99497	189 aa	Known RBP	18.15	■□□□□ 0.5
TARDBP-231	ENST00000639599	PDHX	O00330	501 aa		18.14	■□□□□ 0.49
TARDBP-231	ENST00000639599	ENTPD3	O75355	529 aa		18.14	■□□□□ 0.49
TARDBP-231	ENST00000639599	RGS3	P49796	1198 aa		18.14	■□□□□ 0.49
TARDBP-231	ENST00000639599	PRMT2	P55345	433 aa		18.14	■□□□□ 0.49
TARDBP-231	ENST00000639599	TIMM10	P62072	90 aa		18.14	■□□□□ 0.49
TARDBP-231	ENST00000639599	PICALM	Q13492	652 aa		18.14	■□□□□ 0.49
TARDBP-231	ENST00000639599	RASGRF1	Q13972	1273 aa		18.14	■□□□□ 0.49
TARDBP-231	ENST00000639599	CPA4	Q9UI42	421 aa		18.14	■□□□□ 0.49
TARDBP-231	ENST00000639599	FMNL1	O95466	1100 aa	Predicted RBP	18.13	■□□□□ 0.49
TARDBP-231	ENST00000639599	GNAI2	P04899	355 aa		18.13	■□□□□ 0.49
TARDBP-231	ENST00000639599	BTD	P43251	543 aa		18.13	■□□□□ 0.49
TARDBP-231	ENST00000639599	GSTO1	P78417	241 aa		18.13	■□□□□ 0.49
TARDBP-231	ENST00000639599	TFCP2	Q12800	502 aa		18.13	■□□□□ 0.49
TARDBP-231	ENST00000639599	G3BP1	Q13283	466 aa	Known RBP eCLIP	18.13	■□□□□ 0.49	5e-9	■□□□□ 10.1
TARDBP-231	ENST00000639599	NOL9	Q5SY16	702 aa	Known RBP	18.13	■□□□□ 0.49
TARDBP-231	ENST00000639599	XAGE2	Q96GT9	111 aa		18.13	■□□□□ 0.49
TARDBP-231	ENST00000639599	ZNF333	Q96JL9	665 aa		18.13	■□□□□ 0.49
TARDBP-231	ENST00000639599	NOL10	Q9BSC4	688 aa	Known RBP	18.13	■□□□□ 0.49
TARDBP-231	ENST00000639599	FAM198A	Q9UFP1	575 aa		18.13	■□□□□ 0.49
TARDBP-231	ENST00000639599	ZNF112	Q9UJU3	913 aa		18.13	■□□□□ 0.49
TARDBP-231	ENST00000639599	PDS5A	Q29RF7	1337 aa	Known RBP	18.13	■□□□□ 0.49
TARDBP-231	ENST00000639599	LDHC	P07864	332 aa		18.12	■□□□□ 0.49
TARDBP-231	ENST00000639599	FASTKD5	Q7L8L6	764 aa	Known RBP	18.12	■□□□□ 0.49
TARDBP-231	ENST00000639599	SCYL3	Q8IZE3	742 aa		18.12	■□□□□ 0.49
TARDBP-231	ENST00000639599	RAET1E	Q8TD07	263 aa		18.12	■□□□□ 0.49
TARDBP-231	ENST00000639599	IDI2	Q9BXS1	227 aa		18.12	■□□□□ 0.49
TARDBP-231	ENST00000639599	KCNH4	Q9UQ05	1017 aa		18.12	■□□□□ 0.49
TARDBP-231	ENST00000639599	CXCL11	O14625	94 aa		18.11	■□□□□ 0.49
TARDBP-231	ENST00000639599	EN2	P19622	333 aa	Predicted RBP	18.11	■□□□□ 0.49
TARDBP-231	ENST00000639599	PSMC4	P43686	418 aa		18.11	■□□□□ 0.49
TARDBP-231	ENST00000639599	OS9	Q13438	667 aa	Predicted RBP	18.11	■□□□□ 0.49
TARDBP-231	ENST00000639599	ATF7IP	Q6VMQ6	1270 aa		18.11	■□□□□ 0.49
TARDBP-231	ENST00000639599	GADL1	Q6ZQY3	521 aa		18.11	■□□□□ 0.49
TARDBP-231	ENST00000639599	ARHGAP39	Q9C0H5	1083 aa		18.11	■□□□□ 0.49
TARDBP-231	ENST00000639599	ZHX2	Q9Y6X8	837 aa		18.11	■□□□□ 0.49
TARDBP-231	ENST00000639599	MROH7-TTC4	A0A0A0MT08	1334 aa		18.11	■□□□□ 0.49
TARDBP-231	ENST00000639599	GAK	O14976	1311 aa		18.11	■□□□□ 0.49
TARDBP-231	ENST00000639599	LAMB1	P07942	1786 aa		18.1	■□□□□ 0.49

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