RNA–Protein interactions for RNA: ENST00000635776.1

SCN1A-210, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1A, Length 10,107 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-210ENST00000635776 RPS6KA4O75676 772 aa5.25□□□□□ -1.57
SCN1A-210ENST00000635776 CMA1P23946 247 aa5.25□□□□□ -1.57
SCN1A-210ENST00000635776 FAM177BA6PVY3 158 aa5.25□□□□□ -1.57
SCN1A-210ENST00000635776 ZSCAN12O43309 604 aa5.25□□□□□ -1.57
SCN1A-210ENST00000635776 TTC6Q86TZ1 520 aa5.25□□□□□ -1.57
SCN1A-210ENST00000635776 ZNF444Q8N0Y2 327 aaPredicted RBP5.25□□□□□ -1.57
SCN1A-210ENST00000635776 MAGEB6Q8N7X4 407 aa5.25□□□□□ -1.57
SCN1A-210ENST00000635776 MRFAP1L1Q96HT8 127 aa5.25□□□□□ -1.57
SCN1A-210ENST00000635776 GLT8D2Q9H1C3 349 aa5.25□□□□□ -1.57
SCN1A-210ENST00000635776 CNTNAP4Q9C0A0 1308 aa5.25□□□□□ -1.57
SCN1A-210ENST00000635776 CACNA1FO60840 1977 aa5.25□□□□□ -1.57
SCN1A-210ENST00000635776 SYKP43405 635 aa5.24□□□□□ -1.57
SCN1A-210ENST00000635776 RBM6P78332 1123 aaKnown RBP5.24□□□□□ -1.57
SCN1A-210ENST00000635776 PKP1Q13835 747 aa5.24□□□□□ -1.57
SCN1A-210ENST00000635776 OSBP2Q969R2 916 aa5.24□□□□□ -1.57
SCN1A-210ENST00000635776 CTAGE1Q96RT6 745 aa5.24□□□□□ -1.57
SCN1A-210ENST00000635776 RNF26Q9BY78 433 aaPredicted RBP5.24□□□□□ -1.57
SCN1A-210ENST00000635776 CPA1P15085 419 aa5.24□□□□□ -1.57
SCN1A-210ENST00000635776 TRAPPC10P48553 1259 aa5.24□□□□□ -1.57
SCN1A-210ENST00000635776 RESTQ13127 1097 aa5.24□□□□□ -1.57
SCN1A-210ENST00000635776 TRAPPC3LQ5T215 181 aa5.24□□□□□ -1.57
SCN1A-210ENST00000635776 KRI1Q8N9T8 703 aaKnown RBP5.24□□□□□ -1.57
SCN1A-210ENST00000635776 CNNM3Q8NE01 707 aa5.24□□□□□ -1.57
SCN1A-210ENST00000635776 TDRD7Q8NHU6 1098 aaKnown RBP5.24□□□□□ -1.57
SCN1A-210ENST00000635776 NUP133Q8WUM0 1156 aa5.24□□□□□ -1.57
SCN1A-210ENST00000635776 FERMT2Q96AC1 680 aa5.24□□□□□ -1.57
SCN1A-210ENST00000635776 CDC25BP30305 580 aa5.24□□□□□ -1.57
SCN1A-210ENST00000635776 IFIT1BQ5T764 474 aaKnown RBP5.24□□□□□ -1.57
SCN1A-210ENST00000635776 CCDC129Q6ZRS4 1044 aa5.24□□□□□ -1.57
SCN1A-210ENST00000635776 MB21D2Q8IYB1 491 aaPredicted RBP5.24□□□□□ -1.57
SCN1A-210ENST00000635776 TCEANC2Q96MN5 208 aa5.24□□□□□ -1.57
SCN1A-210ENST00000635776 KAT14Q9H8E8 782 aa5.24□□□□□ -1.57
SCN1A-210ENST00000635776 MKNK2Q9HBH9 465 aa5.24□□□□□ -1.57
SCN1A-210ENST00000635776 CAMTA1Q9Y6Y1 1673 aa5.24□□□□□ -1.57
SCN1A-210ENST00000635776 IPO7O95373 1038 aaKnown RBP5.24□□□□□ -1.57
SCN1A-210ENST00000635776 SFPQP23246 707 aaKnown RBP eCLIP5.24□□□□□ -1.57
SCN1A-210ENST00000635776 USP5P45974 858 aa5.24□□□□□ -1.57
SCN1A-210ENST00000635776 HAND2P61296 217 aa5.24□□□□□ -1.57
SCN1A-210ENST00000635776 SCRN1Q12765 414 aa5.24□□□□□ -1.57
SCN1A-210ENST00000635776 VPS72Q15906 364 aa5.24□□□□□ -1.57
SCN1A-210ENST00000635776 MICU3Q86XE3 530 aa5.24□□□□□ -1.57
SCN1A-210ENST00000635776 TRIM34Q9BYJ4 488 aa5.24□□□□□ -1.57
SCN1A-210ENST00000635776 TRIM75PA6NK02 468 aa5.24□□□□□ -1.57
SCN1A-210ENST00000635776 hCG_1984214I3L0E3 225 aa5.24□□□□□ -1.57
SCN1A-210ENST00000635776 DYNC1I1O14576 645 aa5.24□□□□□ -1.57
SCN1A-210ENST00000635776 RRP9O43818 475 aaKnown RBP5.24□□□□□ -1.57
SCN1A-210ENST00000635776 KIF20AO95235 890 aa5.24□□□□□ -1.57
SCN1A-210ENST00000635776 TUBB4BP68371 445 aa5.24□□□□□ -1.57
SCN1A-210ENST00000635776 MCTP2Q6DN12 878 aa5.24□□□□□ -1.57
SCN1A-210ENST00000635776 GAS2L3Q86XJ1 694 aa5.24□□□□□ -1.57
SCN1A-210ENST00000635776 ELOA2Q8IYF1 753 aaPredicted RBP5.24□□□□□ -1.57
SCN1A-210ENST00000635776 ZNF713Q8N859 430 aaPredicted RBP5.24□□□□□ -1.57
SCN1A-210ENST00000635776 PUS3Q9BZE2 481 aaKnown RBP5.24□□□□□ -1.57
SCN1A-210ENST00000635776 PIBF1Q8WXW3 757 aa5.24□□□□□ -1.57
SCN1A-210ENST00000635776 STRBPQ96SI9 672 aaKnown RBP5.24□□□□□ -1.57
SCN1A-210ENST00000635776 FOXP1Q9H334 677 aaPredicted RBP5.24□□□□□ -1.57
SCN1A-210ENST00000635776 NARFQ9UHQ1 456 aa5.24□□□□□ -1.57
SCN1A-210ENST00000635776 CCNL1Q9UK58 526 aaPredicted RBP5.24□□□□□ -1.57
SCN1A-210ENST00000635776 MINDY4BA8MYZ0 360 aa5.24□□□□□ -1.57
SCN1A-210ENST00000635776 HSP90AA2PQ14568 343 aaPredicted RBP5.24□□□□□ -1.57
SCN1A-210ENST00000635776 RBM17Q96I25 401 aaKnown RBP5.24□□□□□ -1.57
SCN1A-210ENST00000635776 CLIP2Q9UDT6 1046 aa5.24□□□□□ -1.57
SCN1A-210ENST00000635776 UBAP1LF5GYI3 381 aa5.24□□□□□ -1.57
SCN1A-210ENST00000635776 STAG1Q8WVM7 1258 aa5.24□□□□□ -1.57
SCN1A-210ENST00000635776 SLC26A6Q9BXS9 759 aa5.24□□□□□ -1.57
SCN1A-210ENST00000635776 ARGLU1Q9NWB6 273 aaPredicted RBP5.24□□□□□ -1.57
SCN1A-210ENST00000635776 SLC39A14Q15043 492 aa5.23□□□□□ -1.57
SCN1A-210ENST00000635776 ANO6Q4KMQ2 910 aa5.23□□□□□ -1.57
SCN1A-210ENST00000635776 SPATA31A5Q5VU36 1347 aa5.23□□□□□ -1.57
SCN1A-210ENST00000635776 SPATA31A7Q8IWB4 1347 aa5.23□□□□□ -1.57
SCN1A-210ENST00000635776 ZBTB22O15209 634 aa5.23□□□□□ -1.57
SCN1A-210ENST00000635776 SERPINC1P01008 464 aa5.23□□□□□ -1.57
SCN1A-210ENST00000635776 CEBPZQ03701 1054 aaKnown RBP5.23□□□□□ -1.57
SCN1A-210ENST00000635776 CHRNDQ07001 517 aa5.23□□□□□ -1.57
SCN1A-210ENST00000635776 MLKLQ8NB16 471 aa5.23□□□□□ -1.57
SCN1A-210ENST00000635776 EDC3Q96F86 508 aaKnown RBP5.23□□□□□ -1.57
SCN1A-210ENST00000635776 EYA3Q99504 573 aa5.23□□□□□ -1.57
SCN1A-210ENST00000635776 SH2B2O14492 632 aaPredicted RBP5.23□□□□□ -1.57
SCN1A-210ENST00000635776 AMPD3Q01432 767 aa5.23□□□□□ -1.57
SCN1A-210ENST00000635776 SLC10A5Q5PT55 438 aa5.23□□□□□ -1.57
SCN1A-210ENST00000635776 KRT40Q6A162 431 aa5.23□□□□□ -1.57
SCN1A-210ENST00000635776 ANKIB1Q9P2G1 1089 aa5.23□□□□□ -1.57
SCN1A-210ENST00000635776 KDM3BQ7LBC6 1761 aa5.23□□□□□ -1.57
SCN1A-210ENST00000635776 TSPY2A6NKD2 308 aa5.23□□□□□ -1.57
SCN1A-210ENST00000635776 ATP2B4P23634 1241 aa5.23□□□□□ -1.57
SCN1A-210ENST00000635776 PPARAQ07869 468 aa5.23□□□□□ -1.57
SCN1A-210ENST00000635776 APOA5Q6Q788 366 aa5.23□□□□□ -1.57
SCN1A-210ENST00000635776 SARM1Q6SZW1 724 aa5.23□□□□□ -1.57
SCN1A-210ENST00000635776 RANBP6O60518 1105 aaKnown RBP5.23□□□□□ -1.57
SCN1A-210ENST00000635776 DLG5Q8TDM6 1919 aa5.23□□□□□ -1.57
SCN1A-210ENST00000635776 CCDC194A0A1B0GVG4 234 aa5.23□□□□□ -1.57
SCN1A-210ENST00000635776 LDHBP07195 334 aaKnown RBP5.23□□□□□ -1.57
SCN1A-210ENST00000635776 R3HCC1Q9Y3T6 440 aaKnown RBP5.23□□□□□ -1.57
SCN1A-210ENST00000635776 IKBKBO14920 756 aa5.23□□□□□ -1.57
SCN1A-210ENST00000635776 KRT2P35908 639 aa5.23□□□□□ -1.57
SCN1A-210ENST00000635776 CAMK4Q16566 473 aa5.23□□□□□ -1.57
SCN1A-210ENST00000635776 CNBD1Q8NA66 436 aa5.23□□□□□ -1.57
SCN1A-210ENST00000635776 PARP4Q9UKK3 1724 aaKnown RBP5.23□□□□□ -1.57
SCN1A-210ENST00000635776 GADD45BO75293 160 aaPredicted RBP5.23□□□□□ -1.57
SCN1A-210ENST00000635776 CKAP2LQ8IYA6 745 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms