RNA–Protein interactions for RNA: ENST00000628364.2

NRXN1-228, Transcript of neurexin 1, humanhuman

TSL 5 BASIC

Gene NRXN1, Length 2,444 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NRXN1-228ENST00000628364 KIAA1468Q9P260 1216 aa31.31■■■□□ 2.6
NRXN1-228ENST00000628364 DENND2AQ9ULE3 1009 aa31.31■■■□□ 2.6
NRXN1-228ENST00000628364 DOT1LQ8TEK3 1739 aa31.31■■■□□ 2.6
NRXN1-228ENST00000628364 NEMFO60524 1076 aa31.3■■■□□ 2.6
NRXN1-228ENST00000628364 NFXL1Q6ZNB6 911 aa31.3■■■□□ 2.6
NRXN1-228ENST00000628364 SLIT2O94813 1529 aa31.3■■■□□ 2.6
NRXN1-228ENST00000628364 KDM4FA0A1W2PPD8 638 aa31.3■■■□□ 2.6
NRXN1-228ENST00000628364 SLC39A14Q15043 492 aa31.3■■■□□ 2.6
NRXN1-228ENST00000628364 KRT23Q9C075 422 aa31.3■■■□□ 2.6
NRXN1-228ENST00000628364 LY9Q9HBG7 655 aa31.3■■■□□ 2.6
NRXN1-228ENST00000628364 THRAP3Q9Y2W1 955 aaKnown RBP31.3■■■□□ 2.6
NRXN1-228ENST00000628364 COL16A1Q07092 1604 aaPredicted RBP31.3■■■□□ 2.6
NRXN1-228ENST00000628364 MYO5AQ9Y4I1 1855 aaKnown RBP31.3■■■□□ 2.6
NRXN1-228ENST00000628364 NEDD4P46934 1319 aa31.3■■■□□ 2.6
NRXN1-228ENST00000628364 TMEM67Q5HYA8 995 aa31.29■■■□□ 2.6
NRXN1-228ENST00000628364 KAT6BQ8WYB5 2073 aa31.29■■■□□ 2.6
NRXN1-228ENST00000628364 MBD4O95243 580 aa31.29■■■□□ 2.6
NRXN1-228ENST00000628364 IGHMBP2P38935 993 aaKnown RBP31.29■■■□□ 2.6
NRXN1-228ENST00000628364 BPIFA3Q9BQP9 254 aa31.29■■■□□ 2.6
NRXN1-228ENST00000628364 GJB4Q9NTQ9 266 aa31.29■■■□□ 2.6
NRXN1-228ENST00000628364 DOCK2Q92608 1830 aa31.28■■■□□ 2.6
NRXN1-228ENST00000628364 IARSP41252 1262 aaKnown RBP31.28■■■□□ 2.6
NRXN1-228ENST00000628364 JMYQ8N9B5 988 aa31.28■■■□□ 2.6
NRXN1-228ENST00000628364 ATP6V1AP38606 617 aa31.28■■■□□ 2.6
NRXN1-228ENST00000628364 CRKLP46109 303 aaKnown RBP31.28■■■□□ 2.6
NRXN1-228ENST00000628364 GLIPR1L2Q4G1C9 344 aa31.28■■■□□ 2.6
NRXN1-228ENST00000628364 KRT40Q6A162 431 aa31.28■■■□□ 2.6
NRXN1-228ENST00000628364 NACAP1Q9BZK3 213 aa31.28■■■□□ 2.6
NRXN1-228ENST00000628364 CDC27P30260 824 aa31.27■■■□□ 2.6
NRXN1-228ENST00000628364 TRIM29Q14134 588 aa31.27■■■□□ 2.6
NRXN1-228ENST00000628364 AXDND1Q5T1B0 1012 aaPredicted RBP31.27■■■□□ 2.6
NRXN1-228ENST00000628364 EPB41L4AQ9HCS5 686 aaPredicted RBP31.27■■■□□ 2.6
NRXN1-228ENST00000628364 GOLGA8AA7E2F4 631 aa31.27■■■□□ 2.6
NRXN1-228ENST00000628364 PPP6R2O75170 966 aa31.27■■■□□ 2.6
NRXN1-228ENST00000628364 RBM6P78332 1123 aaKnown RBP31.27■■■□□ 2.6
NRXN1-228ENST00000628364 MICU3Q86XE3 530 aa31.27■■■□□ 2.6
NRXN1-228ENST00000628364 VPS37DQ86XT2 251 aa31.27■■■□□ 2.6
NRXN1-228ENST00000628364 PNPLA7Q6ZV29 1317 aa31.27■■■□□ 2.6
NRXN1-228ENST00000628364 STK36Q9NRP7 1315 aa31.27■■■□□ 2.6
NRXN1-228ENST00000628364 CAMTA2O94983 1202 aa31.26■■■□□ 2.6
NRXN1-228ENST00000628364 ZNF202O95125 648 aa31.26■■■□□ 2.6
NRXN1-228ENST00000628364 NTRK3Q16288 839 aa31.26■■■□□ 2.6
NRXN1-228ENST00000628364 DDB1Q16531 1140 aa31.26■■■□□ 2.6
NRXN1-228ENST00000628364 AKNAD1Q5T1N1 836 aa31.26■■■□□ 2.6
NRXN1-228ENST00000628364 NKX2-3Q8TAU0 364 aa31.26■■■□□ 2.6
NRXN1-228ENST00000628364 TIGD1Q96MW7 591 aa31.26■■■□□ 2.6
NRXN1-228ENST00000628364 LRMPQ12912 555 aa31.26■■■□□ 2.59
NRXN1-228ENST00000628364 GNL2Q13823 731 aaKnown RBP31.26■■■□□ 2.59
NRXN1-228ENST00000628364 MTA3Q9BTC8 594 aa31.26■■■□□ 2.59
NRXN1-228ENST00000628364 SEC31BQ9NQW1 1179 aa31.26■■■□□ 2.59
NRXN1-228ENST00000628364 ZSWIM5Q9P217 1185 aa31.26■■■□□ 2.59
NRXN1-228ENST00000628364 SLC12A7Q9Y666 1083 aa31.26■■■□□ 2.59
NRXN1-228ENST00000628364 SLC3A2P08195 630 aaKnown RBP31.25■■■□□ 2.59
NRXN1-228ENST00000628364 CCDC69A6NI79 296 aa31.25■■■□□ 2.59
NRXN1-228ENST00000628364 GSG1L2A8MUP6 293 aa31.25■■■□□ 2.59
NRXN1-228ENST00000628364 IFIT3O14879 490 aaKnown RBP31.25■■■□□ 2.59
NRXN1-228ENST00000628364 MFSD6Q6ZSS7 791 aa31.25■■■□□ 2.59
NRXN1-228ENST00000628364 WASF1Q92558 559 aa31.25■■■□□ 2.59
NRXN1-228ENST00000628364 ARMT1Q9H993 441 aa31.25■■■□□ 2.59
NRXN1-228ENST00000628364 AHDC1Q5TGY3 1603 aaPredicted RBP31.25■■■□□ 2.59
NRXN1-228ENST00000628364 AOPEPQ8N6M6 819 aa31.24■■■□□ 2.59
NRXN1-228ENST00000628364 CACTINQ8WUQ7 758 aaKnown RBP31.24■■■□□ 2.59
NRXN1-228ENST00000628364 TIAM2Q8IVF5 1701 aa31.24■■■□□ 2.59
NRXN1-228ENST00000628364 NID2Q14112 1375 aa31.24■■■□□ 2.59
NRXN1-228ENST00000628364 U2AF2P26368 475 aaKnown RBP eCLIP31.24■■■□□ 2.59
NRXN1-228ENST00000628364 SENP2Q9HC62 589 aa31.24■■■□□ 2.59
NRXN1-228ENST00000628364 LOC102724428A0A0B4J2F2 783 aa31.23■■■□□ 2.59
NRXN1-228ENST00000628364 PFKFB1P16118 471 aa31.23■■■□□ 2.59
NRXN1-228ENST00000628364 SIK1P57059 783 aa31.23■■■□□ 2.59
NRXN1-228ENST00000628364 CCDC144BQ3MJ40 725 aa31.23■■■□□ 2.59
NRXN1-228ENST00000628364 CCDC144CPQ8IYA2 1237 aa31.23■■■□□ 2.59
NRXN1-228ENST00000628364 STAG1Q8WVM7 1258 aa31.23■■■□□ 2.59
NRXN1-228ENST00000628364 PHKBQ93100 1093 aa31.23■■■□□ 2.59
NRXN1-228ENST00000628364 AIFM3Q96NN9 605 aa31.23■■■□□ 2.59
NRXN1-228ENST00000628364 FAM217BQ9NTX9 383 aaPredicted RBP31.23■■■□□ 2.59
NRXN1-228ENST00000628364 RREB1Q92766 1687 aa31.23■■■□□ 2.59
NRXN1-228ENST00000628364 SPATA31A1Q5TZJ5 1347 aa31.23■■■□□ 2.59
NRXN1-228ENST00000628364 FAM177BA6PVY3 158 aa31.23■■■□□ 2.59
NRXN1-228ENST00000628364 RXRAP19793 462 aa31.23■■■□□ 2.59
NRXN1-228ENST00000628364 SSRP1Q08945 709 aaKnown RBP31.23■■■□□ 2.59
NRXN1-228ENST00000628364 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP31.22■■■□□ 2.59
NRXN1-228ENST00000628364 NTSR2O95665 410 aa31.22■■■□□ 2.59
NRXN1-228ENST00000628364 CTDSPL2Q05D32 466 aa31.22■■■□□ 2.59
NRXN1-228ENST00000628364 SART3Q15020 963 aaKnown RBP31.22■■■□□ 2.59
NRXN1-228ENST00000628364 LRRC8AQ8IWT6 810 aa31.22■■■□□ 2.59
NRXN1-228ENST00000628364 NLRP12P59046 1061 aa31.22■■■□□ 2.59
NRXN1-228ENST00000628364 NIP7Q9Y221 180 aaKnown RBP eCLIP31.22■■■□□ 2.59
NRXN1-228ENST00000628364 FMNL1O95466 1100 aaPredicted RBP31.2■■■□□ 2.59
NRXN1-228ENST00000628364 TDO2P48775 406 aa31.2■■■□□ 2.59
NRXN1-228ENST00000628364 BCAMP50895 628 aa31.2■■■□□ 2.59
NRXN1-228ENST00000628364 TMTC2Q8N394 836 aa31.2■■■□□ 2.59
NRXN1-228ENST00000628364 ERCC4Q92889 916 aaPredicted RBP31.2■■■□□ 2.59
NRXN1-228ENST00000628364 SLC4A4Q9Y6R1 1079 aa31.2■■■□□ 2.59
NRXN1-228ENST00000628364 ROBO1Q9Y6N7 1651 aa31.2■■■□□ 2.59
NRXN1-228ENST00000628364 WDHD1O75717 1129 aaPredicted RBP31.2■■■□□ 2.59
NRXN1-228ENST00000628364 IFNAR1P17181 557 aa31.2■■■□□ 2.59
NRXN1-228ENST00000628364 TPM4P67936 248 aa31.2■■■□□ 2.59
NRXN1-228ENST00000628364 CDC5LQ99459 802 aaKnown RBP31.2■■■□□ 2.59
NRXN1-228ENST00000628364 RNF41Q9H4P4 317 aaPredicted RBP31.2■■■□□ 2.59
NRXN1-228ENST00000628364 CICQ96RK0 1608 aaPredicted RBP31.2■■■□□ 2.58
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms