RNA–Protein interactions for RNA: ENST00000617482.4

C11orf54-215, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 3 BASIC

Gene C11orf54, Length 2,417 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-215ENST00000617482 UBE2Q2LH0YL09 131 aa13.66□□□□□ -0.22
C11orf54-215ENST00000617482 IRS4O14654 1257 aaPredicted RBP13.66□□□□□ -0.22
C11orf54-215ENST00000617482 LMOD1P29536 600 aaPredicted RBP13.66□□□□□ -0.22
C11orf54-215ENST00000617482 CCDC102BQ68D86 513 aa13.66□□□□□ -0.22
C11orf54-215ENST00000617482 KRT40Q6A162 431 aa13.66□□□□□ -0.22
C11orf54-215ENST00000617482 APOA5Q6Q788 366 aa13.66□□□□□ -0.22
C11orf54-215ENST00000617482 NFXL1Q6ZNB6 911 aa13.66□□□□□ -0.22
C11orf54-215ENST00000617482 TRMT112Q9UI30 125 aaKnown RBP13.66□□□□□ -0.22
C11orf54-215ENST00000617482 WWC3Q9ULE0 1092 aa13.66□□□□□ -0.22
C11orf54-215ENST00000617482 XIRP1Q702N8 1843 aaKnown RBP13.66□□□□□ -0.22
C11orf54-215ENST00000617482 SPEF2Q9C093 1822 aa13.66□□□□□ -0.22
C11orf54-215ENST00000617482 PARP4Q9UKK3 1724 aaKnown RBP13.66□□□□□ -0.22
C11orf54-215ENST00000617482 SH2B2O14492 632 aaPredicted RBP13.66□□□□□ -0.22
C11orf54-215ENST00000617482 SYKP43405 635 aa13.66□□□□□ -0.22
C11orf54-215ENST00000617482 GSDMDP57764 484 aa13.66□□□□□ -0.22
C11orf54-215ENST00000617482 SYTL4Q96C24 671 aaPredicted RBP13.66□□□□□ -0.22
C11orf54-215ENST00000617482 CLIC6Q96NY7 704 aa13.66□□□□□ -0.22
C11orf54-215ENST00000617482 TEX13AQ9BXU3 409 aaPredicted RBP13.66□□□□□ -0.22
C11orf54-215ENST00000617482 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.66□□□□□ -0.22
C11orf54-215ENST00000617482 V9GYY5 206 aaPredicted RBP13.66□□□□□ -0.22
C11orf54-215ENST00000617482 UBR2Q8IWV8 1755 aa13.66□□□□□ -0.22
C11orf54-215ENST00000617482 WDR19Q8NEZ3 1342 aa13.66□□□□□ -0.22
C11orf54-215ENST00000617482 PDE8BO95263 885 aa13.65□□□□□ -0.22
C11orf54-215ENST00000617482 PDE6AP16499 860 aa13.65□□□□□ -0.22
C11orf54-215ENST00000617482 NCAPHQ15003 741 aa13.65□□□□□ -0.22
C11orf54-215ENST00000617482 TTF1Q15361 905 aaPredicted RBP13.65□□□□□ -0.22
C11orf54-215ENST00000617482 ARMCX5Q6P1M9 558 aa13.65□□□□□ -0.22
C11orf54-215ENST00000617482 VGLL2Q8N8G2 317 aa13.65□□□□□ -0.22
C11orf54-215ENST00000617482 BPIFA3Q9BQP9 254 aa13.65□□□□□ -0.22
C11orf54-215ENST00000617482 OSBPL5Q9H0X9 879 aaPredicted RBP13.65□□□□□ -0.22
C11orf54-215ENST00000617482 SNAP23O00161 211 aa13.65□□□□□ -0.22
C11orf54-215ENST00000617482 ATP1A3P13637 1013 aa13.65□□□□□ -0.22
C11orf54-215ENST00000617482 ZSCAN20P17040 1043 aaPredicted RBP13.65□□□□□ -0.22
C11orf54-215ENST00000617482 SHC4Q6S5L8 630 aa13.65□□□□□ -0.22
C11orf54-215ENST00000617482 AIDAQ96BJ3 306 aa13.65□□□□□ -0.22
C11orf54-215ENST00000617482 IMPACTQ9P2X3 320 aa13.65□□□□□ -0.22
C11orf54-215ENST00000617482 ABCC12Q96J65 1359 aa13.65□□□□□ -0.22
C11orf54-215ENST00000617482 ZBTB43O43298 467 aa13.64□□□□□ -0.23
C11orf54-215ENST00000617482 CDKL5O76039 1030 aa13.64□□□□□ -0.23
C11orf54-215ENST00000617482 PNOCQ13519 176 aa13.64□□□□□ -0.23
C11orf54-215ENST00000617482 UBE3CQ15386 1083 aa13.64□□□□□ -0.23
C11orf54-215ENST00000617482 IGDCC4Q8TDY8 1250 aa13.64□□□□□ -0.23
C11orf54-215ENST00000617482 SLAIN2Q9P270 581 aa13.64□□□□□ -0.23
C11orf54-215ENST00000617482 PRDM4Q9UKN5 801 aa13.64□□□□□ -0.23
C11orf54-215ENST00000617482 ZNF215Q9UL58 517 aaPredicted RBP13.64□□□□□ -0.23
C11orf54-215ENST00000617482 TBC1D2BQ9UPU7 963 aa13.64□□□□□ -0.23
C11orf54-215ENST00000617482 IARSP41252 1262 aaKnown RBP13.64□□□□□ -0.23
C11orf54-215ENST00000617482 TPM4P67936 248 aa13.64□□□□□ -0.23
C11orf54-215ENST00000617482 CTDSPL2Q05D32 466 aa13.64□□□□□ -0.23
C11orf54-215ENST00000617482 SYCP1Q15431 976 aa13.64□□□□□ -0.23
C11orf54-215ENST00000617482 TMEM67Q5HYA8 995 aa13.64□□□□□ -0.23
C11orf54-215ENST00000617482 CPLX2Q6PUV4 134 aaKnown RBP13.64□□□□□ -0.23
C11orf54-215ENST00000617482 PAXIP1Q6ZW49 1069 aaPredicted RBP13.64□□□□□ -0.23
C11orf54-215ENST00000617482 STK11IPQ8N1F8 1099 aa13.64□□□□□ -0.23
C11orf54-215ENST00000617482 CNKSR2Q8WXI2 1034 aa13.64□□□□□ -0.23
C11orf54-215ENST00000617482 STRBPQ96SI9 672 aaKnown RBP13.64□□□□□ -0.23
C11orf54-215ENST00000617482 CDHR2Q9BYE9 1310 aa13.63□□□□□ -0.23
C11orf54-215ENST00000617482 RANBP6O60518 1105 aaKnown RBP13.63□□□□□ -0.23
C11orf54-215ENST00000617482 E4F1Q66K89 784 aaPredicted RBP13.63□□□□□ -0.23
C11orf54-215ENST00000617482 FAM217BQ9NTX9 383 aaPredicted RBP13.63□□□□□ -0.23
C11orf54-215ENST00000617482 ZSWIM5Q9P217 1185 aa13.63□□□□□ -0.23
C11orf54-215ENST00000617482 ZNF335Q9H4Z2 1342 aaPredicted RBP13.63□□□□□ -0.23
C11orf54-215ENST00000617482 TCRBV5S4A2TA0A5A2 114 aa13.63□□□□□ -0.23
C11orf54-215ENST00000617482 GOLGA8AA7E2F4 631 aa13.63□□□□□ -0.23
C11orf54-215ENST00000617482 SFPQP23246 707 aaKnown RBP eCLIP13.63□□□□□ -0.23
C11orf54-215ENST00000617482 FANCCQ00597 558 aa13.63□□□□□ -0.23
C11orf54-215ENST00000617482 TRIM29Q14134 588 aa13.63□□□□□ -0.23
C11orf54-215ENST00000617482 PTPAQ15257 358 aa13.63□□□□□ -0.23
C11orf54-215ENST00000617482 NTRK3Q16288 839 aa13.63□□□□□ -0.23
C11orf54-215ENST00000617482 SPECC1Q5M775 1068 aa13.63□□□□□ -0.23
C11orf54-215ENST00000617482 KIF18AQ8NI77 898 aa13.63□□□□□ -0.23
C11orf54-215ENST00000617482 ZNF512BQ96KM6 892 aaPredicted RBP13.63□□□□□ -0.23
C11orf54-215ENST00000617482 SLC4A9Q96Q91 983 aa13.63□□□□□ -0.23
C11orf54-215ENST00000617482 MAP3K14Q99558 947 aa13.63□□□□□ -0.23
C11orf54-215ENST00000617482 SLC26A6Q9BXS9 759 aa13.63□□□□□ -0.23
C11orf54-215ENST00000617482 LY9Q9HBG7 655 aa13.63□□□□□ -0.23
C11orf54-215ENST00000617482 PTPN21Q16825 1174 aa13.62□□□□□ -0.23
C11orf54-215ENST00000617482 CCDC82Q8N4S0 544 aa13.62□□□□□ -0.23
C11orf54-215ENST00000617482 MAGEB6Q8N7X4 407 aa13.62□□□□□ -0.23
C11orf54-215ENST00000617482 TMEM87BQ96K49 555 aa13.62□□□□□ -0.23
C11orf54-215ENST00000617482 HSD3B7Q9H2F3 369 aa13.62□□□□□ -0.23
C11orf54-215ENST00000617482 ZBTB1Q9Y2K1 713 aa13.62□□□□□ -0.23
C11orf54-215ENST00000617482 KAT6BQ8WYB5 2073 aa13.62□□□□□ -0.23
C11orf54-215ENST00000617482 UBN2Q6ZU65 1347 aa13.62□□□□□ -0.23
C11orf54-215ENST00000617482 IFIT3O14879 490 aaKnown RBP13.62□□□□□ -0.23
C11orf54-215ENST00000617482 NPHP1O15259 732 aa13.62□□□□□ -0.23
C11orf54-215ENST00000617482 PPP6R2O75170 966 aa13.62□□□□□ -0.23
C11orf54-215ENST00000617482 LONRF3Q496Y0 759 aa13.62□□□□□ -0.23
C11orf54-215ENST00000617482 RRP12Q5JTH9 1297 aaKnown RBP13.62□□□□□ -0.23
C11orf54-215ENST00000617482 JMYQ8N9B5 988 aa13.62□□□□□ -0.23
C11orf54-215ENST00000617482 NAPBQ9H115 298 aa13.62□□□□□ -0.23
C11orf54-215ENST00000617482 HPSEQ9Y251 543 aa13.62□□□□□ -0.23
C11orf54-215ENST00000617482 SLC12A7Q9Y666 1083 aa13.62□□□□□ -0.23
C11orf54-215ENST00000617482 SOS2Q07890 1332 aaPredicted RBP13.61□□□□□ -0.23
C11orf54-215ENST00000617482 SHANK3Q9BYB0 1731 aa13.61□□□□□ -0.23
C11orf54-215ENST00000617482 PDE8AO60658 829 aa13.61□□□□□ -0.23
C11orf54-215ENST00000617482 MBD4O95243 580 aa13.61□□□□□ -0.23
C11orf54-215ENST00000617482 CYP19A1P11511 503 aaPredicted RBP13.61□□□□□ -0.23
C11orf54-215ENST00000617482 IFNL3Q8IZI9 196 aa13.61□□□□□ -0.23
C11orf54-215ENST00000617482 CCDC150Q8NCX0 1101 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms