RNA–Protein interactions for RNA: ENST00000595596.1

GRAMD1A-205, Transcript of GRAM domain containing 1A, humanhuman

TSL 2

Gene GRAMD1A, Length 881 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1A-205ENST00000595596 CACNB3P54284 484 aa23.67■■□□□ 1.38
GRAMD1A-205ENST00000595596 CAP1Q01518 475 aa23.67■■□□□ 1.38
GRAMD1A-205ENST00000595596 SNAPC2Q13487 334 aa23.67■■□□□ 1.38
GRAMD1A-205ENST00000595596 HHIPL2Q6UWX4 724 aa23.67■■□□□ 1.38
GRAMD1A-205ENST00000595596 ANKRD44Q8N8A2 993 aa23.67■■□□□ 1.38
GRAMD1A-205ENST00000595596 PTCH2Q9Y6C5 1203 aa23.67■■□□□ 1.38
GRAMD1A-205ENST00000595596 SNCAIPQ9Y6H5 919 aa23.67■■□□□ 1.38
GRAMD1A-205ENST00000595596 GNRH1P01148 92 aa23.66■■□□□ 1.38
GRAMD1A-205ENST00000595596 SLC4A8Q2Y0W8 1093 aa23.66■■□□□ 1.38
GRAMD1A-205ENST00000595596 RCAN3Q9UKA8 241 aa23.66■■□□□ 1.38
GRAMD1A-205ENST00000595596 PPIL2Q13356 520 aa23.65■■□□□ 1.38
GRAMD1A-205ENST00000595596 PUM3Q15397 648 aaKnown RBP23.65■■□□□ 1.38
GRAMD1A-205ENST00000595596 APOBEC3HQ6NTF7 200 aaKnown RBP23.65■■□□□ 1.38
GRAMD1A-205ENST00000595596 ARHGAP45Q92619 1136 aa23.65■■□□□ 1.38
GRAMD1A-205ENST00000595596 TNNQ9UQP3 1299 aa23.65■■□□□ 1.38
GRAMD1A-205ENST00000595596 IPO8O15397 1037 aaKnown RBP23.64■■□□□ 1.37
GRAMD1A-205ENST00000595596 PRMT2P55345 433 aa23.64■■□□□ 1.37
GRAMD1A-205ENST00000595596 WDR66Q8TBY9 1149 aa23.64■■□□□ 1.37
GRAMD1A-205ENST00000595596 ZKSCAN4Q969J2 545 aaPredicted RBP23.64■■□□□ 1.37
GRAMD1A-205ENST00000595596 ZNF341Q9BYN7 854 aa23.64■■□□□ 1.37
GRAMD1A-205ENST00000595596 RPAP1Q9BWH6 1393 aaPredicted RBP23.64■■□□□ 1.37
GRAMD1A-205ENST00000595596 BTBD19C9JJ37 291 aa23.63■■□□□ 1.37
GRAMD1A-205ENST00000595596 IRF6O14896 467 aa23.63■■□□□ 1.37
GRAMD1A-205ENST00000595596 FGFR2P21802 821 aa23.63■■□□□ 1.37
GRAMD1A-205ENST00000595596 CENPFP49454 3210 aa23.63■■□□□ 1.37
GRAMD1A-205ENST00000595596 PPATQ06203 517 aa23.63■■□□□ 1.37
GRAMD1A-205ENST00000595596 ZKSCAN2Q63HK3 967 aa23.63■■□□□ 1.37
GRAMD1A-205ENST00000595596 ATF7IPQ6VMQ6 1270 aa23.63■■□□□ 1.37
GRAMD1A-205ENST00000595596 SLC5A1P13866 664 aa23.62■■□□□ 1.37
GRAMD1A-205ENST00000595596 TRIM27P14373 513 aa23.62■■□□□ 1.37
GRAMD1A-205ENST00000595596 LACTBP83111 547 aaPredicted RBP23.62■■□□□ 1.37
GRAMD1A-205ENST00000595596 KLHDC4Q8TBB5 520 aa23.62■■□□□ 1.37
GRAMD1A-205ENST00000595596 FAM151AQ8WW52 585 aa23.61■■□□□ 1.37
GRAMD1A-205ENST00000595596 USP44Q9H0E7 712 aa23.61■■□□□ 1.37
GRAMD1A-205ENST00000595596 MKI67P46013 3256 aaKnown RBP23.6■■□□□ 1.37
GRAMD1A-205ENST00000595596 EYA2O00167 538 aa23.6■■□□□ 1.37
GRAMD1A-205ENST00000595596 LPIN2Q92539 896 aa23.6■■□□□ 1.37
GRAMD1A-205ENST00000595596 CLUAP1Q96AJ1 413 aa23.6■■□□□ 1.37
GRAMD1A-205ENST00000595596 MIGA2Q7L4E1 593 aa23.59■■□□□ 1.37
GRAMD1A-205ENST00000595596 HOXD10P28358 340 aa23.58■■□□□ 1.37
GRAMD1A-205ENST00000595596 ANKRD23Q86SG2 305 aa23.58■■□□□ 1.37
GRAMD1A-205ENST00000595596 ARHGAP39Q9C0H5 1083 aa23.58■■□□□ 1.37
GRAMD1A-205ENST00000595596 ZSWIM8A7E2V4 1837 aa23.58■■□□□ 1.37
GRAMD1A-205ENST00000595596 C17orf99Q6UX52 265 aa23.57■■□□□ 1.36
GRAMD1A-205ENST00000595596 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.57■■□□□ 1.36
GRAMD1A-205ENST00000595596 SH3TC2Q8TF17 1288 aa23.57■■□□□ 1.36
GRAMD1A-205ENST00000595596 GNL3LQ9NVN8 582 aaKnown RBP23.57■■□□□ 1.36
GRAMD1A-205ENST00000595596 ZNF112Q9UJU3 913 aa23.57■■□□□ 1.36
GRAMD1A-205ENST00000595596 INPP5BP32019 993 aa23.56■■□□□ 1.36
GRAMD1A-205ENST00000595596 FBXO3Q9UK99 471 aa23.56■■□□□ 1.36
GRAMD1A-205ENST00000595596 MYCP01106 439 aaPredicted RBP23.55■■□□□ 1.36
GRAMD1A-205ENST00000595596 RFX5P48382 616 aaPredicted RBP23.55■■□□□ 1.36
GRAMD1A-205ENST00000595596 KCNH4Q9UQ05 1017 aa23.55■■□□□ 1.36
GRAMD1A-205ENST00000595596 DAGLAQ9Y4D2 1042 aa23.55■■□□□ 1.36
GRAMD1A-205ENST00000595596 PDHXO00330 501 aa23.54■■□□□ 1.36
GRAMD1A-205ENST00000595596 LDHBP07195 334 aaKnown RBP23.54■■□□□ 1.36
GRAMD1A-205ENST00000595596 PSMC4P43686 418 aa23.54■■□□□ 1.36
GRAMD1A-205ENST00000595596 TCP10Q12799 353 aa23.54■■□□□ 1.36
GRAMD1A-205ENST00000595596 CDC42EP5Q6NZY7 148 aa23.54■■□□□ 1.36
GRAMD1A-205ENST00000595596 FTSJ3Q8IY81 847 aaKnown RBP23.54■■□□□ 1.36
GRAMD1A-205ENST00000595596 CEP126Q9P2H0 1117 aa23.54■■□□□ 1.36
GRAMD1A-205ENST00000595596 SRRDQ9UH36 339 aa23.54■■□□□ 1.36
GRAMD1A-205ENST00000595596 CPA4Q9UI42 421 aa23.54■■□□□ 1.36
GRAMD1A-205ENST00000595596 NOL9Q5SY16 702 aaKnown RBP23.53■■□□□ 1.36
GRAMD1A-205ENST00000595596 TMEM57Q8N5G2 664 aa23.53■■□□□ 1.36
GRAMD1A-205ENST00000595596 FMNL1O95466 1100 aaPredicted RBP23.52■■□□□ 1.36
GRAMD1A-205ENST00000595596 RLBP1P12271 317 aa23.52■■□□□ 1.36
GRAMD1A-205ENST00000595596 DIXDC1Q155Q3 683 aa23.52■■□□□ 1.36
GRAMD1A-205ENST00000595596 ATG9AQ7Z3C6 839 aa23.52■■□□□ 1.36
GRAMD1A-205ENST00000595596 NKX2-3Q8TAU0 364 aa23.52■■□□□ 1.36
GRAMD1A-205ENST00000595596 RAET1EQ8TD07 263 aa23.52■■□□□ 1.36
GRAMD1A-205ENST00000595596 USP40Q9NVE5 1235 aa23.52■■□□□ 1.36
GRAMD1A-205ENST00000595596 DENND2AQ9ULE3 1009 aa23.52■■□□□ 1.36
GRAMD1A-205ENST00000595596 HDAC5Q9UQL6 1122 aa23.52■■□□□ 1.36
GRAMD1A-205ENST00000595596 MYH2Q9UKX2 1941 aa23.52■■□□□ 1.36
GRAMD1A-205ENST00000595596 CEP290O15078 2479 aa23.51■■□□□ 1.35
GRAMD1A-205ENST00000595596 SEMA3EO15041 775 aa23.51■■□□□ 1.35
GRAMD1A-205ENST00000595596 CIAO1O76071 339 aa23.51■■□□□ 1.35
GRAMD1A-205ENST00000595596 PRDX5P30044 214 aa23.51■■□□□ 1.35
GRAMD1A-205ENST00000595596 ATP2B3Q16720 1220 aa23.51■■□□□ 1.35
GRAMD1A-205ENST00000595596 SALL1Q9NSC2 1324 aa23.51■■□□□ 1.35
GRAMD1A-205ENST00000595596 MGAMO43451 1857 aa23.5■■□□□ 1.35
GRAMD1A-205ENST00000595596 CXCL11O14625 94 aa23.5■■□□□ 1.35
GRAMD1A-205ENST00000595596 UBTFL1P0CB47 393 aaPredicted RBP23.5■■□□□ 1.35
GRAMD1A-205ENST00000595596 GRK4P32298 578 aa23.5■■□□□ 1.35
GRAMD1A-205ENST00000595596 FXR1P51114 621 aaKnown RBP eCLIP23.5■■□□□ 1.35
GRAMD1A-205ENST00000595596 PANK1Q8TE04 598 aa23.5■■□□□ 1.35
GRAMD1A-205ENST00000595596 TRIM47Q96LD4 638 aa23.5■■□□□ 1.35
GRAMD1A-205ENST00000595596 COLQQ9Y215 455 aaPredicted RBP23.5■■□□□ 1.35
GRAMD1A-205ENST00000595596 BRCA2P51587 3418 aa23.49■■□□□ 1.35
GRAMD1A-205ENST00000595596 OSBPP22059 807 aa23.49■■□□□ 1.35
GRAMD1A-205ENST00000595596 NFIAQ12857 509 aa23.49■■□□□ 1.35
GRAMD1A-205ENST00000595596 ZGPATQ8N5A5 531 aaKnown RBP23.49■■□□□ 1.35
GRAMD1A-205ENST00000595596 PARK7Q99497 189 aaKnown RBP23.49■■□□□ 1.35
GRAMD1A-205ENST00000595596 SIL1Q9H173 461 aa23.49■■□□□ 1.35
GRAMD1A-205ENST00000595596 FAM198AQ9UFP1 575 aa23.49■■□□□ 1.35
GRAMD1A-205ENST00000595596 DOCK2Q92608 1830 aa23.48■■□□□ 1.35
GRAMD1A-205ENST00000595596 ECM2O94769 699 aaPredicted RBP23.48■■□□□ 1.35
GRAMD1A-205ENST00000595596 MEIS3Q99687 375 aa23.48■■□□□ 1.35
GRAMD1A-205ENST00000595596 ADGRA2Q96PE1 1338 aa23.48■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms