RNA–Protein interactions for RNA: ENST00000586339.1

HDAC5-203, Transcript of histone deacetylase 5, humanhuman

TSL 2

Gene HDAC5, Length 465 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-203ENST00000586339 PTPN18Q99952 460 aa17.47■□□□□ 0.39
HDAC5-203ENST00000586339 PA2G4Q9UQ80 394 aaKnown RBP17.47■□□□□ 0.39
HDAC5-203ENST00000586339 DAGLAQ9Y4D2 1042 aa17.47■□□□□ 0.39
HDAC5-203ENST00000586339 PDS5AQ29RF7 1337 aaKnown RBP17.47■□□□□ 0.39
HDAC5-203ENST00000586339 PRDX5P30044 214 aa17.46■□□□□ 0.39
HDAC5-203ENST00000586339 ERO1BQ86YB8 467 aa17.46■□□□□ 0.39
HDAC5-203ENST00000586339 FAM151AQ8WW52 585 aa17.46■□□□□ 0.39
HDAC5-203ENST00000586339 WRNIP1Q96S55 665 aa17.46■□□□□ 0.39
HDAC5-203ENST00000586339 CCL15-CCL14A0A0B4J2E2 113 aa17.45■□□□□ 0.38
HDAC5-203ENST00000586339 SRGAP3O43295 1099 aa17.45■□□□□ 0.38
HDAC5-203ENST00000586339 PHKA1P46020 1223 aa17.45■□□□□ 0.38
HDAC5-203ENST00000586339 CCL15Q16663 113 aa17.45■□□□□ 0.38
HDAC5-203ENST00000586339 OTOP1Q7RTM1 612 aa17.45■□□□□ 0.38
HDAC5-203ENST00000586339 CNKSR2Q8WXI2 1034 aa17.45■□□□□ 0.38
HDAC5-203ENST00000586339 BRI3BPQ8WY22 251 aa17.45■□□□□ 0.38
HDAC5-203ENST00000586339 OTUD5Q96G74 571 aa17.45■□□□□ 0.38
HDAC5-203ENST00000586339 ZCCHC17Q9NP64 241 aaKnown RBP17.45■□□□□ 0.38
HDAC5-203ENST00000586339 TRIM17Q9Y577 477 aa17.45■□□□□ 0.38
HDAC5-203ENST00000586339 SNCAIPQ9Y6H5 919 aa17.45■□□□□ 0.38
HDAC5-203ENST00000586339 TRIM27P14373 513 aa17.44■□□□□ 0.38
HDAC5-203ENST00000586339 DIXDC1Q155Q3 683 aa17.44■□□□□ 0.38
HDAC5-203ENST00000586339 CCDC102BQ68D86 513 aa17.44■□□□□ 0.38
HDAC5-203ENST00000586339 CDC42EP5Q6NZY7 148 aa17.44■□□□□ 0.38
HDAC5-203ENST00000586339 ATF7IPQ6VMQ6 1270 aa17.44■□□□□ 0.38
HDAC5-203ENST00000586339 ZNF341Q9BYN7 854 aa17.44■□□□□ 0.38
HDAC5-203ENST00000586339 AKAP2Q9Y2D5 859 aa17.44■□□□□ 0.38
HDAC5-203ENST00000586339 SP3Q02447 781 aa17.43■□□□□ 0.38
HDAC5-203ENST00000586339 A0A1B0GUL7 405 aa17.42■□□□□ 0.38
HDAC5-203ENST00000586339 WDHD1O75717 1129 aaPredicted RBP17.42■□□□□ 0.38
HDAC5-203ENST00000586339 GNAI2P04899 355 aa17.42■□□□□ 0.38
HDAC5-203ENST00000586339 CETPP11597 493 aa17.42■□□□□ 0.38
HDAC5-203ENST00000586339 ADORA1P30542 326 aa17.42■□□□□ 0.38
HDAC5-203ENST00000586339 PPIL2Q13356 520 aa17.42■□□□□ 0.38
HDAC5-203ENST00000586339 SNAPC2Q13487 334 aa17.42■□□□□ 0.38
HDAC5-203ENST00000586339 RASGRF1Q13972 1273 aa17.42■□□□□ 0.38
HDAC5-203ENST00000586339 MVPQ14764 893 aaKnown RBP17.42■□□□□ 0.38
HDAC5-203ENST00000586339 TAF1CQ15572 869 aaPredicted RBP17.42■□□□□ 0.38
HDAC5-203ENST00000586339 ZFYVE28Q9HCC9 887 aa17.42■□□□□ 0.38
HDAC5-203ENST00000586339 GAKO14976 1311 aa17.42■□□□□ 0.38
HDAC5-203ENST00000586339 RFX7Q2KHR2 1363 aa17.41■□□□□ 0.38
HDAC5-203ENST00000586339 PTPRFP10586 1907 aa17.41■□□□□ 0.38
HDAC5-203ENST00000586339 PPATQ06203 517 aa17.41■□□□□ 0.38
HDAC5-203ENST00000586339 ARHGEF6Q15052 776 aa17.41■□□□□ 0.38
HDAC5-203ENST00000586339 SLF2Q8IX21 1173 aa17.41■□□□□ 0.38
HDAC5-203ENST00000586339 CD99L2Q8TCZ2 262 aa17.41■□□□□ 0.38
HDAC5-203ENST00000586339 ZKSCAN4Q969J2 545 aaPredicted RBP17.41■□□□□ 0.38
HDAC5-203ENST00000586339 EFCC1Q9HA90 598 aa17.41■□□□□ 0.38
HDAC5-203ENST00000586339 ZNF112Q9UJU3 913 aa17.41■□□□□ 0.38
HDAC5-203ENST00000586339 IRF6O14896 467 aa17.4■□□□□ 0.38
HDAC5-203ENST00000586339 TIMM10P62072 90 aa17.4■□□□□ 0.38
HDAC5-203ENST00000586339 NFIAQ12857 509 aa17.4■□□□□ 0.38
HDAC5-203ENST00000586339 SPTY2D1Q68D10 685 aaPredicted RBP17.4■□□□□ 0.38
HDAC5-203ENST00000586339 DZIP1Q86YF9 867 aaKnown RBP17.4■□□□□ 0.38
HDAC5-203ENST00000586339 FAM43AQ8N2R8 423 aa17.4■□□□□ 0.38
HDAC5-203ENST00000586339 FRAT1Q92837 279 aaPredicted RBP17.4■□□□□ 0.38
HDAC5-203ENST00000586339 FAM163AQ96GL9 167 aaPredicted RBP17.4■□□□□ 0.38
HDAC5-203ENST00000586339 XAGE2Q96GT9 111 aa17.4■□□□□ 0.38
HDAC5-203ENST00000586339 IDI2Q9BXS1 227 aa17.4■□□□□ 0.38
HDAC5-203ENST00000586339 USP40Q9NVE5 1235 aa17.4■□□□□ 0.38
HDAC5-203ENST00000586339 FAM198AQ9UFP1 575 aa17.4■□□□□ 0.38
HDAC5-203ENST00000586339 DOCK1Q14185 1865 aa17.39■□□□□ 0.38
HDAC5-203ENST00000586339 BCAR3O75815 825 aa17.39■□□□□ 0.37
HDAC5-203ENST00000586339 INPP5BP32019 993 aa17.39■□□□□ 0.37
HDAC5-203ENST00000586339 TCP10Q12799 353 aa17.39■□□□□ 0.37
HDAC5-203ENST00000586339 TFCP2Q12800 502 aa17.39■□□□□ 0.37
HDAC5-203ENST00000586339 NOL9Q5SY16 702 aaKnown RBP17.39■□□□□ 0.37
HDAC5-203ENST00000586339 MIGA2Q7L4E1 593 aa17.39■□□□□ 0.37
HDAC5-203ENST00000586339 PTPN22Q9Y2R2 807 aa17.39■□□□□ 0.37
HDAC5-203ENST00000586339 MKI67P46013 3256 aaKnown RBP17.39■□□□□ 0.37
HDAC5-203ENST00000586339 BRCA2P51587 3418 aa17.38■□□□□ 0.37
HDAC5-203ENST00000586339 MAST2Q6P0Q8 1798 aa17.38■□□□□ 0.37
HDAC5-203ENST00000586339 BTBD19C9JJ37 291 aa17.38■□□□□ 0.37
HDAC5-203ENST00000586339 ENTPD3O75355 529 aa17.38■□□□□ 0.37
HDAC5-203ENST00000586339 ZKSCAN2Q63HK3 967 aa17.38■□□□□ 0.37
HDAC5-203ENST00000586339 ABCF2Q9UG63 623 aa17.38■□□□□ 0.37
HDAC5-203ENST00000586339 KCNH4Q9UQ05 1017 aa17.38■□□□□ 0.37
HDAC5-203ENST00000586339 ATRNL1Q5VV63 1379 aa17.38■□□□□ 0.37
HDAC5-203ENST00000586339 TLR2O60603 784 aa17.37■□□□□ 0.37
HDAC5-203ENST00000586339 ARMC5Q96C12 935 aa17.37■□□□□ 0.37
HDAC5-203ENST00000586339 MROH7-TTC4A0A0A0MT08 1334 aa17.37■□□□□ 0.37
HDAC5-203ENST00000586339 PHIPQ8WWQ0 1821 aa17.37■□□□□ 0.37
HDAC5-203ENST00000586339 ZSWIM8A7E2V4 1837 aa17.36■□□□□ 0.37
HDAC5-203ENST00000586339 ARID4AP29374 1257 aaPredicted RBP17.36■□□□□ 0.37
HDAC5-203ENST00000586339 RGS3P49796 1198 aa17.36■□□□□ 0.37
HDAC5-203ENST00000586339 G3BP1Q13283 466 aaKnown RBP eCLIP17.36■□□□□ 0.37
HDAC5-203ENST00000586339 ERICH6Q7L0X2 663 aa17.36■□□□□ 0.37
HDAC5-203ENST00000586339 CLUAP1Q96AJ1 413 aa17.36■□□□□ 0.37
HDAC5-203ENST00000586339 TNNQ9UQP3 1299 aa17.36■□□□□ 0.37
HDAC5-203ENST00000586339 MGAMO43451 1857 aa17.35■□□□□ 0.37
HDAC5-203ENST00000586339 PNMA6EA0A0J9YXQ4 647 aa17.35■□□□□ 0.37
HDAC5-203ENST00000586339 MAP4K4O95819 1239 aaPredicted RBP17.35■□□□□ 0.37
HDAC5-203ENST00000586339 ANKRD23Q86SG2 305 aa17.35■□□□□ 0.37
HDAC5-203ENST00000586339 TMEM57Q8N5G2 664 aa17.35■□□□□ 0.37
HDAC5-203ENST00000586339 NEUROD6Q96NK8 337 aa17.35■□□□□ 0.37
HDAC5-203ENST00000586339 COL2A1P02458 1487 aaPredicted RBP17.35■□□□□ 0.37
HDAC5-203ENST00000586339 FOCADQ5VW36 1801 aa17.35■□□□□ 0.37
HDAC5-203ENST00000586339 ATAD5Q96QE3 1844 aa17.35■□□□□ 0.37
HDAC5-203ENST00000586339 GPR75-ASB3A0A0A6YYF3 556 aa17.34■□□□□ 0.37
HDAC5-203ENST00000586339 NPM3O75607 178 aaKnown RBP17.34■□□□□ 0.37
HDAC5-203ENST00000586339 GNRH1P01148 92 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms