RNA–Protein interactions for RNA: ENST00000581204.1

SUPT4H1-206, Transcript of SPT4 homolog, DSIF elongation factor subunit, humanhuman

TSL 2

Gene SUPT4H1, Length 539 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1-206ENST00000581204 JDP2Q8WYK2 163 aa10.52□□□□□ -0.73
SUPT4H1-206ENST00000581204 RWDD1Q9H446 243 aaPredicted RBP10.52□□□□□ -0.73
SUPT4H1-206ENST00000581204 NR1I2O75469 434 aa10.51□□□□□ -0.73
SUPT4H1-206ENST00000581204 RGMBQ6NW40 437 aa10.51□□□□□ -0.73
SUPT4H1-206ENST00000581204 NBPF10Q6P3W6 841 aaKnown RBP10.51□□□□□ -0.73
SUPT4H1-206ENST00000581204 SLC17A8Q8NDX2 589 aa10.51□□□□□ -0.73
SUPT4H1-206ENST00000581204 CSRNP1Q96S65 589 aa10.51□□□□□ -0.73
SUPT4H1-206ENST00000581204 SLC27A5Q9Y2P5 690 aa10.51□□□□□ -0.73
SUPT4H1-206ENST00000581204 PAPPA2Q9BXP8 1791 aa10.51□□□□□ -0.73
SUPT4H1-206ENST00000581204 GNAI3P08754 354 aa10.5□□□□□ -0.73
SUPT4H1-206ENST00000581204 KIF6Q6ZMV9 814 aa10.5□□□□□ -0.73
SUPT4H1-206ENST00000581204 PLBD2Q8NHP8 589 aa10.5□□□□□ -0.73
SUPT4H1-206ENST00000581204 TRPM4Q8TD43 1214 aa10.5□□□□□ -0.73
SUPT4H1-206ENST00000581204 WNT2BQ93097 391 aa10.5□□□□□ -0.73
SUPT4H1-206ENST00000581204 SETDB2Q96T68 719 aa10.5□□□□□ -0.73
SUPT4H1-206ENST00000581204 MEIS3Q99687 375 aa10.5□□□□□ -0.73
SUPT4H1-206ENST00000581204 ALDH1L1O75891 902 aa10.49□□□□□ -0.73
SUPT4H1-206ENST00000581204 IGHDP01880 384 aa10.49□□□□□ -0.73
SUPT4H1-206ENST00000581204 UBTFL1P0CB47 393 aaPredicted RBP10.49□□□□□ -0.73
SUPT4H1-206ENST00000581204 BEND3Q5T5X7 828 aa10.49□□□□□ -0.73
SUPT4H1-206ENST00000581204 LRP10Q7Z4F1 713 aa10.49□□□□□ -0.73
SUPT4H1-206ENST00000581204 LINS1Q8NG48 757 aa10.49□□□□□ -0.73
SUPT4H1-206ENST00000581204 ZNF296Q8WUU4 475 aaPredicted RBP10.49□□□□□ -0.73
SUPT4H1-206ENST00000581204 METTL22Q9BUU2 404 aaPredicted RBP10.49□□□□□ -0.73
SUPT4H1-206ENST00000581204 C9orf78Q9NZ63 289 aaPredicted RBP10.49□□□□□ -0.73
SUPT4H1-206ENST00000581204 PCDHB3Q9Y5E6 796 aa10.49□□□□□ -0.73
SUPT4H1-206ENST00000581204 RANBP2P49792 3224 aaKnown RBP10.48□□□□□ -0.73
SUPT4H1-206ENST00000581204 GNAI2P04899 355 aa10.48□□□□□ -0.73
SUPT4H1-206ENST00000581204 PUS10Q3MIT2 529 aaKnown RBP10.48□□□□□ -0.73
SUPT4H1-206ENST00000581204 FBXO46Q6PJ61 603 aaPredicted RBP10.48□□□□□ -0.73
SUPT4H1-206ENST00000581204 TTLL7Q6ZT98 887 aa10.48□□□□□ -0.73
SUPT4H1-206ENST00000581204 CDC37L1Q7L3B6 337 aa10.48□□□□□ -0.73
SUPT4H1-206ENST00000581204 CALR3Q96L12 384 aaKnown RBP10.48□□□□□ -0.73
SUPT4H1-206ENST00000581204 MYD88Q99836 296 aa10.48□□□□□ -0.73
SUPT4H1-206ENST00000581204 USB1Q9BQ65 265 aaKnown RBP10.48□□□□□ -0.73
SUPT4H1-206ENST00000581204 TRIM34Q9BYJ4 488 aa10.48□□□□□ -0.73
SUPT4H1-206ENST00000581204 HMX1Q9NP08 348 aaPredicted RBP10.48□□□□□ -0.73
SUPT4H1-206ENST00000581204 HDAC5Q9UQL6 1122 aa10.48□□□□□ -0.73
SUPT4H1-206ENST00000581204 SHTN1A0MZ66 631 aa10.47□□□□□ -0.73
SUPT4H1-206ENST00000581204 FMNL1O95466 1100 aaPredicted RBP10.47□□□□□ -0.73
SUPT4H1-206ENST00000581204 IL6STP40189 918 aaPredicted RBP10.47□□□□□ -0.73
SUPT4H1-206ENST00000581204 GMPSP49915 693 aaPredicted RBP10.47□□□□□ -0.73
SUPT4H1-206ENST00000581204 HDAC1Q13547 482 aaPredicted RBP10.47□□□□□ -0.73
SUPT4H1-206ENST00000581204 CWF19L2Q2TBE0 894 aaKnown RBP10.47□□□□□ -0.73
SUPT4H1-206ENST00000581204 NYAP1Q6ZVC0 841 aa10.47□□□□□ -0.73
SUPT4H1-206ENST00000581204 LARGE2Q8N3Y3 721 aa10.47□□□□□ -0.73
SUPT4H1-206ENST00000581204 LRRN4Q8WUT4 740 aa10.47□□□□□ -0.73
SUPT4H1-206ENST00000581204 USP44Q9H0E7 712 aa10.47□□□□□ -0.73
SUPT4H1-206ENST00000581204 PITPNM2Q9BZ72 1349 aa10.47□□□□□ -0.73
SUPT4H1-206ENST00000581204 NPHP1O15259 732 aa10.46□□□□□ -0.73
SUPT4H1-206ENST00000581204 HMMRO75330 724 aa10.46□□□□□ -0.73
SUPT4H1-206ENST00000581204 CXCL9Q07325 125 aa10.46□□□□□ -0.73
SUPT4H1-206ENST00000581204 LCE2DQ5TA82 110 aaPredicted RBP10.46□□□□□ -0.73
SUPT4H1-206ENST00000581204 USP48Q86UV5 1035 aa10.46□□□□□ -0.73
SUPT4H1-206ENST00000581204 NBPF5PQ86XG9 351 aaPredicted RBP10.46□□□□□ -0.73
SUPT4H1-206ENST00000581204 RPAP2Q8IXW5 612 aaPredicted RBP10.46□□□□□ -0.73
SUPT4H1-206ENST00000581204 SYMPKQ92797 1274 aaKnown RBP10.46□□□□□ -0.73
SUPT4H1-206ENST00000581204 GBA2Q9HCG7 927 aaPredicted RBP10.46□□□□□ -0.73
SUPT4H1-206ENST00000581204 CDHR2Q9BYE9 1310 aa10.46□□□□□ -0.73
SUPT4H1-206ENST00000581204 RIC1Q4ADV7 1423 aa10.45□□□□□ -0.74
SUPT4H1-206ENST00000581204 ABCC12Q96J65 1359 aa10.45□□□□□ -0.74
SUPT4H1-206ENST00000581204 NEURL1BA8MQ27 555 aa10.45□□□□□ -0.74
SUPT4H1-206ENST00000581204 ATP5J2-PTCD1G3V325 749 aa10.45□□□□□ -0.74
SUPT4H1-206ENST00000581204 ALDH1B1P30837 517 aa10.45□□□□□ -0.74
SUPT4H1-206ENST00000581204 SOX11P35716 441 aa10.45□□□□□ -0.74
SUPT4H1-206ENST00000581204 BCAMP50895 628 aa10.45□□□□□ -0.74
SUPT4H1-206ENST00000581204 ZNF157P51786 506 aaPredicted RBP10.45□□□□□ -0.74
SUPT4H1-206ENST00000581204 CRY2Q49AN0 593 aa10.45□□□□□ -0.74
SUPT4H1-206ENST00000581204 CEP85Q6P2H3 762 aa10.45□□□□□ -0.74
SUPT4H1-206ENST00000581204 BRICD5Q6PL45 260 aa10.45□□□□□ -0.74
SUPT4H1-206ENST00000581204 LYPD8Q6UX82 237 aa10.45□□□□□ -0.74
SUPT4H1-206ENST00000581204 DZIP3Q86Y13 1208 aaKnown RBP10.45□□□□□ -0.74
SUPT4H1-206ENST00000581204 RASAL3Q86YV0 1011 aa10.45□□□□□ -0.74
SUPT4H1-206ENST00000581204 ANKRD44Q8N8A2 993 aa10.45□□□□□ -0.74
SUPT4H1-206ENST00000581204 GLMNQ92990 594 aa10.45□□□□□ -0.74
SUPT4H1-206ENST00000581204 LRRFIP2Q9Y608 721 aaKnown RBP10.45□□□□□ -0.74
SUPT4H1-206ENST00000581204 CUL9Q8IWT3 2517 aa10.45□□□□□ -0.74
SUPT4H1-206ENST00000581204 MAP3K15Q6ZN16 1313 aa10.44□□□□□ -0.74
SUPT4H1-206ENST00000581204 GRM8O00222 908 aa10.44□□□□□ -0.74
SUPT4H1-206ENST00000581204 IGKV5-2P06315 115 aa10.44□□□□□ -0.74
SUPT4H1-206ENST00000581204 NBPF7P0C2Y1 421 aaPredicted RBP10.44□□□□□ -0.74
SUPT4H1-206ENST00000581204 IRF5Q13568 498 aa10.44□□□□□ -0.74
SUPT4H1-206ENST00000581204 GCKRQ14397 625 aa10.44□□□□□ -0.74
SUPT4H1-206ENST00000581204 HSP90AB3PQ58FF7 597 aa10.44□□□□□ -0.74
SUPT4H1-206ENST00000581204 NOM1Q5C9Z4 860 aaKnown RBP10.44□□□□□ -0.74
SUPT4H1-206ENST00000581204 NIM1KQ8IY84 436 aa10.44□□□□□ -0.74
SUPT4H1-206ENST00000581204 HDAC9Q9UKV0 1011 aa10.44□□□□□ -0.74
SUPT4H1-206ENST00000581204 UNC80Q8N2C7 3258 aa10.44□□□□□ -0.74
SUPT4H1-206ENST00000581204 TRIOBPQ9H2D6 2365 aa10.44□□□□□ -0.74
SUPT4H1-206ENST00000581204 TBC1D8O95759 1140 aa10.43□□□□□ -0.74
SUPT4H1-206ENST00000581204 TCIRG1Q13488 830 aa10.43□□□□□ -0.74
SUPT4H1-206ENST00000581204 AOC3Q16853 763 aa10.43□□□□□ -0.74
SUPT4H1-206ENST00000581204 CC2D2BQ6DHV5 1058 aa10.43□□□□□ -0.74
SUPT4H1-206ENST00000581204 SCUBE3Q8IX30 993 aa10.43□□□□□ -0.74
SUPT4H1-206ENST00000581204 SIRT2Q8IXJ6 389 aa10.43□□□□□ -0.74
SUPT4H1-206ENST00000581204 CWC25Q9NXE8 425 aaPredicted RBP10.43□□□□□ -0.74
SUPT4H1-206ENST00000581204 ERVV-1B6SEH8 477 aa10.42□□□□□ -0.74
SUPT4H1-206ENST00000581204 ADM5C9JUS6 153 aa10.42□□□□□ -0.74
SUPT4H1-206ENST00000581204 GPR25O00155 361 aa10.42□□□□□ -0.74
SUPT4H1-206ENST00000581204 ATP8B2P98198 1209 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms