RNA–Protein interactions for RNA: ENST00000578018.5

CDK5RAP3-206, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 567 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-206ENST00000578018 OTUD5Q96G74 571 aa20.67■□□□□ 0.9
CDK5RAP3-206ENST00000578018 WRNIP1Q96S55 665 aa20.67■□□□□ 0.9
CDK5RAP3-206ENST00000578018 DENND2AQ9ULE3 1009 aa20.67■□□□□ 0.9
CDK5RAP3-206ENST00000578018 TNNQ9UQP3 1299 aa20.67■□□□□ 0.9
CDK5RAP3-206ENST00000578018 CCL15-CCL14A0A0B4J2E2 113 aa20.66■□□□□ 0.9
CDK5RAP3-206ENST00000578018 SRGAP3O43295 1099 aa20.66■□□□□ 0.9
CDK5RAP3-206ENST00000578018 GTF2A2P52657 109 aa20.66■□□□□ 0.9
CDK5RAP3-206ENST00000578018 CCL15Q16663 113 aa20.66■□□□□ 0.9
CDK5RAP3-206ENST00000578018 CCDC102BQ68D86 513 aa20.66■□□□□ 0.9
CDK5RAP3-206ENST00000578018 CDC42EP5Q6NZY7 148 aa20.66■□□□□ 0.9
CDK5RAP3-206ENST00000578018 OTOP1Q7RTM1 612 aa20.66■□□□□ 0.9
CDK5RAP3-206ENST00000578018 DOCK2Q92608 1830 aa20.65■□□□□ 0.9
CDK5RAP3-206ENST00000578018 IPO8O15397 1037 aaKnown RBP20.65■□□□□ 0.9
CDK5RAP3-206ENST00000578018 BCAR3O75815 825 aa20.65■□□□□ 0.9
CDK5RAP3-206ENST00000578018 NFIAQ12857 509 aa20.65■□□□□ 0.9
CDK5RAP3-206ENST00000578018 DCAF15Q66K64 600 aa20.65■□□□□ 0.9
CDK5RAP3-206ENST00000578018 ATF7IPQ6VMQ6 1270 aa20.65■□□□□ 0.9
CDK5RAP3-206ENST00000578018 FAM151AQ8WW52 585 aa20.65■□□□□ 0.9
CDK5RAP3-206ENST00000578018 ERO1AQ96HE7 468 aa20.65■□□□□ 0.9
CDK5RAP3-206ENST00000578018 TRIM17Q9Y577 477 aa20.65■□□□□ 0.9
CDK5RAP3-206ENST00000578018 PDS5AQ29RF7 1337 aaKnown RBP20.64■□□□□ 0.89
CDK5RAP3-206ENST00000578018 RASGRF1Q13972 1273 aa20.64■□□□□ 0.89
CDK5RAP3-206ENST00000578018 ERO1BQ86YB8 467 aa20.64■□□□□ 0.89
CDK5RAP3-206ENST00000578018 CD99L2Q8TCZ2 262 aa20.64■□□□□ 0.89
CDK5RAP3-206ENST00000578018 ZKSCAN4Q969J2 545 aaPredicted RBP20.64■□□□□ 0.89
CDK5RAP3-206ENST00000578018 A0A1B0GUL7 405 aa20.63■□□□□ 0.89
CDK5RAP3-206ENST00000578018 TIMM10P62072 90 aa20.63■□□□□ 0.89
CDK5RAP3-206ENST00000578018 TFCP2Q12800 502 aa20.63■□□□□ 0.89
CDK5RAP3-206ENST00000578018 FAM43AQ8N2R8 423 aa20.63■□□□□ 0.89
CDK5RAP3-206ENST00000578018 FRAT1Q92837 279 aaPredicted RBP20.63■□□□□ 0.89
CDK5RAP3-206ENST00000578018 ZNF341Q9BYN7 854 aa20.63■□□□□ 0.89
CDK5RAP3-206ENST00000578018 CENPFP49454 3210 aa20.63■□□□□ 0.89
CDK5RAP3-206ENST00000578018 RFX7Q2KHR2 1363 aa20.62■□□□□ 0.89
CDK5RAP3-206ENST00000578018 GAKO14976 1311 aa20.62■□□□□ 0.89
CDK5RAP3-206ENST00000578018 SP3Q02447 781 aa20.62■□□□□ 0.89
CDK5RAP3-206ENST00000578018 TCP10Q12799 353 aa20.62■□□□□ 0.89
CDK5RAP3-206ENST00000578018 TAF1CQ15572 869 aaPredicted RBP20.62■□□□□ 0.89
CDK5RAP3-206ENST00000578018 MIGA2Q7L4E1 593 aa20.62■□□□□ 0.89
CDK5RAP3-206ENST00000578018 ZGPATQ8N5A5 531 aaKnown RBP20.62■□□□□ 0.89
CDK5RAP3-206ENST00000578018 FAM198AQ9UFP1 575 aa20.62■□□□□ 0.89
CDK5RAP3-206ENST00000578018 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.62■□□□□ 0.89
CDK5RAP3-206ENST00000578018 KIAA0100Q14667 2235 aaKnown RBP20.62■□□□□ 0.89
CDK5RAP3-206ENST00000578018 IRF6O14896 467 aa20.61■□□□□ 0.89
CDK5RAP3-206ENST00000578018 GNAI2P04899 355 aa20.61■□□□□ 0.89
CDK5RAP3-206ENST00000578018 INPP5BP32019 993 aa20.61■□□□□ 0.89
CDK5RAP3-206ENST00000578018 CAP1Q01518 475 aa20.61■□□□□ 0.89
CDK5RAP3-206ENST00000578018 PPIL2Q13356 520 aa20.61■□□□□ 0.89
CDK5RAP3-206ENST00000578018 CLUAP1Q96AJ1 413 aa20.61■□□□□ 0.89
CDK5RAP3-206ENST00000578018 XAGE2Q96GT9 111 aa20.61■□□□□ 0.89
CDK5RAP3-206ENST00000578018 USP40Q9NVE5 1235 aa20.61■□□□□ 0.89
CDK5RAP3-206ENST00000578018 AKAP2Q9Y2D5 859 aa20.61■□□□□ 0.89
CDK5RAP3-206ENST00000578018 ATRNL1Q5VV63 1379 aa20.6■□□□□ 0.89
CDK5RAP3-206ENST00000578018 RBBP6Q7Z6E9 1792 aaKnown RBP20.6■□□□□ 0.89
CDK5RAP3-206ENST00000578018 CETPP11597 493 aa20.6■□□□□ 0.89
CDK5RAP3-206ENST00000578018 MVPQ14764 893 aaKnown RBP20.6■□□□□ 0.89
CDK5RAP3-206ENST00000578018 ZFYVE28Q9HCC9 887 aa20.6■□□□□ 0.89
CDK5RAP3-206ENST00000578018 ZNF112Q9UJU3 913 aa20.6■□□□□ 0.89
CDK5RAP3-206ENST00000578018 PNMA6EA0A0J9YXQ4 647 aa20.59■□□□□ 0.89
CDK5RAP3-206ENST00000578018 PPATQ06203 517 aa20.59■□□□□ 0.89
CDK5RAP3-206ENST00000578018 SNAPC2Q13487 334 aa20.59■□□□□ 0.89
CDK5RAP3-206ENST00000578018 DZIP1Q86YF9 867 aaKnown RBP20.59■□□□□ 0.89
CDK5RAP3-206ENST00000578018 EFCC1Q9HA90 598 aa20.59■□□□□ 0.89
CDK5RAP3-206ENST00000578018 ZCCHC17Q9NP64 241 aaKnown RBP20.59■□□□□ 0.89
CDK5RAP3-206ENST00000578018 PTPN22Q9Y2R2 807 aa20.59■□□□□ 0.89
CDK5RAP3-206ENST00000578018 ZSWIM8A7E2V4 1837 aa20.58■□□□□ 0.89
CDK5RAP3-206ENST00000578018 BTBD19C9JJ37 291 aa20.58■□□□□ 0.89
CDK5RAP3-206ENST00000578018 ZKSCAN2Q63HK3 967 aa20.58■□□□□ 0.89
CDK5RAP3-206ENST00000578018 ZFPM1Q8IX07 1006 aa20.58■□□□□ 0.89
CDK5RAP3-206ENST00000578018 IDI2Q9BXS1 227 aa20.58■□□□□ 0.89
CDK5RAP3-206ENST00000578018 ABCF2Q9UG63 623 aa20.58■□□□□ 0.89
CDK5RAP3-206ENST00000578018 RGS3P49796 1198 aa20.57■□□□□ 0.88
CDK5RAP3-206ENST00000578018 NOL9Q5SY16 702 aaKnown RBP20.57■□□□□ 0.88
CDK5RAP3-206ENST00000578018 TMEM57Q8N5G2 664 aa20.57■□□□□ 0.88
CDK5RAP3-206ENST00000578018 ENTPD3O75355 529 aa20.56■□□□□ 0.88
CDK5RAP3-206ENST00000578018 HNRNPUQ00839 825 aaKnown RBP eCLIP20.56■□□□□ 0.88
CDK5RAP3-206ENST00000578018 SPTY2D1Q68D10 685 aaPredicted RBP20.56■□□□□ 0.88
CDK5RAP3-206ENST00000578018 MIER1Q8N108 512 aa20.56■□□□□ 0.88
CDK5RAP3-206ENST00000578018 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.56■□□□□ 0.88
CDK5RAP3-206ENST00000578018 FAM163AQ96GL9 167 aaPredicted RBP20.56■□□□□ 0.88
CDK5RAP3-206ENST00000578018 NEUROD6Q96NK8 337 aa20.56■□□□□ 0.88
CDK5RAP3-206ENST00000578018 BRCA2P51587 3418 aa20.56■□□□□ 0.88
CDK5RAP3-206ENST00000578018 MROH7-TTC4A0A0A0MT08 1334 aa20.55■□□□□ 0.88
CDK5RAP3-206ENST00000578018 TLR2O60603 784 aa20.55■□□□□ 0.88
CDK5RAP3-206ENST00000578018 WDHD1O75717 1129 aaPredicted RBP20.55■□□□□ 0.88
CDK5RAP3-206ENST00000578018 BTDP43251 543 aa20.55■□□□□ 0.88
CDK5RAP3-206ENST00000578018 PI16Q6UXB8 463 aa20.55■□□□□ 0.88
CDK5RAP3-206ENST00000578018 SLF2Q8IX21 1173 aa20.55■□□□□ 0.88
CDK5RAP3-206ENST00000578018 ZNF384Q8TF68 577 aa20.55■□□□□ 0.88
CDK5RAP3-206ENST00000578018 HMG20BQ9P0W2 317 aa20.55■□□□□ 0.88
CDK5RAP3-206ENST00000578018 KCNH4Q9UQ05 1017 aa20.55■□□□□ 0.88
CDK5RAP3-206ENST00000578018 DOCK1Q14185 1865 aa20.54■□□□□ 0.88
CDK5RAP3-206ENST00000578018 ARID4AP29374 1257 aaPredicted RBP20.54■□□□□ 0.88
CDK5RAP3-206ENST00000578018 MECOMQ03112 1051 aa20.54■□□□□ 0.88
CDK5RAP3-206ENST00000578018 SH3BP5LQ7L8J4 393 aa20.54■□□□□ 0.88
CDK5RAP3-206ENST00000578018 ARMC5Q96C12 935 aa20.54■□□□□ 0.88
CDK5RAP3-206ENST00000578018 PTPRFP10586 1907 aa20.54■□□□□ 0.88
CDK5RAP3-206ENST00000578018 MAST2Q6P0Q8 1798 aa20.54■□□□□ 0.88
CDK5RAP3-206ENST00000578018 G3BP1Q13283 466 aaKnown RBP eCLIP20.53■□□□□ 0.88
CDK5RAP3-206ENST00000578018 POLA2Q14181 598 aa20.53■□□□□ 0.88
CDK5RAP3-206ENST00000578018 ERICH6Q7L0X2 663 aa20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 109 ms