RNA–Protein interactions for RNA: ENST00000576932.5

TOM1L1-223, Transcript of target of myb1 like 1 membrane trafficking protein, human

TSL 1 (best)

Gene TOM1L1, Length 1,252 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TOM1L1-223	ENST00000576932	LSM11	P83369	360 aa	Known RBP eCLIP	11.95	□□□□□ -0.5
TOM1L1-223	ENST00000576932	ANKRD13A	Q8IZ07	590 aa		11.95	□□□□□ -0.5
TOM1L1-223	ENST00000576932	DDRGK1	Q96HY6	314 aa		11.95	□□□□□ -0.5
TOM1L1-223	ENST00000576932	CLMN	Q96JQ2	1002 aa		11.95	□□□□□ -0.5
TOM1L1-223	ENST00000576932	PTPN18	Q99952	460 aa		11.95	□□□□□ -0.5
TOM1L1-223	ENST00000576932	MXD3	Q9BW11	206 aa		11.95	□□□□□ -0.5
TOM1L1-223	ENST00000576932	MINPP1	Q9UNW1	487 aa		11.95	□□□□□ -0.5
TOM1L1-223	ENST00000576932	VPS9D1	Q9Y2B5	631 aa		11.95	□□□□□ -0.5
TOM1L1-223	ENST00000576932	LEMD3	Q9Y2U8	911 aa		11.95	□□□□□ -0.5
TOM1L1-223	ENST00000576932	PTCH2	Q9Y6C5	1203 aa		11.95	□□□□□ -0.5
TOM1L1-223	ENST00000576932		A0A1W2PPC1	479 aa		11.94	□□□□□ -0.5
TOM1L1-223	ENST00000576932	GNRH1	P01148	92 aa		11.94	□□□□□ -0.5
TOM1L1-223	ENST00000576932	TMPO	P42166	694 aa	Known RBP	11.94	□□□□□ -0.5
TOM1L1-223	ENST00000576932	IREB2	P48200	963 aa	Known RBP	11.94	□□□□□ -0.5
TOM1L1-223	ENST00000576932	CCT4	P50991	539 aa	Known RBP	11.94	□□□□□ -0.5
TOM1L1-223	ENST00000576932	MDM2	Q00987	491 aa	Predicted RBP	11.94	□□□□□ -0.5
TOM1L1-223	ENST00000576932	CAP1	Q01518	475 aa		11.94	□□□□□ -0.5
TOM1L1-223	ENST00000576932	TTLL5	Q6EMB2	1281 aa		11.94	□□□□□ -0.5
TOM1L1-223	ENST00000576932	RIC3	Q7Z5B4	369 aa		11.94	□□□□□ -0.5
TOM1L1-223	ENST00000576932	CCER1	Q8TC90	406 aa	Predicted RBP	11.94	□□□□□ -0.5
TOM1L1-223	ENST00000576932	PRO3102	Q9H379	93 aa		11.94	□□□□□ -0.5
TOM1L1-223	ENST00000576932	KDM4C	Q9H3R0	1056 aa		11.94	□□□□□ -0.5
TOM1L1-223	ENST00000576932	ECM29	Q5VYK3	1845 aa		11.94	□□□□□ -0.5
TOM1L1-223	ENST00000576932	GOLGA8CP	A6NN73	597 aa		11.93	□□□□□ -0.5
TOM1L1-223	ENST00000576932	GJA5	P36382	358 aa		11.93	□□□□□ -0.5
TOM1L1-223	ENST00000576932	PRMT2	P55345	433 aa		11.93	□□□□□ -0.5
TOM1L1-223	ENST00000576932	DLGAP5	Q15398	846 aa		11.93	□□□□□ -0.5
TOM1L1-223	ENST00000576932	TMEM132A	Q24JP5	1023 aa		11.93	□□□□□ -0.5
TOM1L1-223	ENST00000576932	KRT24	Q2M2I5	525 aa		11.93	□□□□□ -0.5
TOM1L1-223	ENST00000576932	DMRTA1	Q5VZB9	504 aa		11.93	□□□□□ -0.5
TOM1L1-223	ENST00000576932	KIAA0825	Q8IV33	1275 aa		11.93	□□□□□ -0.5
TOM1L1-223	ENST00000576932	MRPL50	Q8N5N7	158 aa	Known RBP	11.93	□□□□□ -0.5
TOM1L1-223	ENST00000576932	ZFYVE28	Q9HCC9	887 aa		11.93	□□□□□ -0.5
TOM1L1-223	ENST00000576932	CWC25	Q9NXE8	425 aa	Predicted RBP	11.93	□□□□□ -0.5
TOM1L1-223	ENST00000576932	FZD1	Q9UP38	647 aa		11.93	□□□□□ -0.5
TOM1L1-223	ENST00000576932	LAMA3	Q16787	3333 aa		11.93	□□□□□ -0.5
TOM1L1-223	ENST00000576932	RCCD1	A6NED2	376 aa		11.92	□□□□□ -0.5
TOM1L1-223	ENST00000576932	MYO1B	O43795	1136 aa		11.92	□□□□□ -0.5
TOM1L1-223	ENST00000576932	USP2	O75604	605 aa	Predicted RBP	11.92	□□□□□ -0.5
TOM1L1-223	ENST00000576932	CTSW	P56202	376 aa		11.92	□□□□□ -0.5
TOM1L1-223	ENST00000576932	NKX2-3	Q8TAU0	364 aa		11.92	□□□□□ -0.5
TOM1L1-223	ENST00000576932	WTIP	A6NIX2	430 aa	Predicted RBP	11.91	□□□□□ -0.5
TOM1L1-223	ENST00000576932	LCE2D	Q5TA82	110 aa	Predicted RBP	11.91	□□□□□ -0.5
TOM1L1-223	ENST00000576932	PARP9	Q8IXQ6	854 aa		11.91	□□□□□ -0.5
TOM1L1-223	ENST00000576932	HTATIP2	Q9BUP3	242 aa		11.91	□□□□□ -0.5
TOM1L1-223	ENST00000576932	ZCCHC17	Q9NP64	241 aa	Known RBP	11.91	□□□□□ -0.5
TOM1L1-223	ENST00000576932	WDHD1	O75717	1129 aa	Predicted RBP	11.9	□□□□□ -0.5
TOM1L1-223	ENST00000576932	GTF2A2	P52657	109 aa		11.9	□□□□□ -0.5
TOM1L1-223	ENST00000576932	FKBP1A	P62942	108 aa	Known RBP	11.9	□□□□□ -0.5
TOM1L1-223	ENST00000576932	GTF2I	P78347	998 aa		11.9	□□□□□ -0.5
TOM1L1-223	ENST00000576932	TAF1C	Q15572	869 aa	Predicted RBP	11.9	□□□□□ -0.5
TOM1L1-223	ENST00000576932	ADGRD1	Q6QNK2	874 aa		11.9	□□□□□ -0.5
TOM1L1-223	ENST00000576932	TXNRD3	Q86VQ6	643 aa		11.9	□□□□□ -0.5
TOM1L1-223	ENST00000576932	TTLL11	Q8NHH1	800 aa		11.9	□□□□□ -0.5
TOM1L1-223	ENST00000576932	DPF3	Q92784	378 aa		11.9	□□□□□ -0.5
TOM1L1-223	ENST00000576932	CCDC85A	Q96PX6	553 aa	Predicted RBP	11.9	□□□□□ -0.5
TOM1L1-223	ENST00000576932	MYD88	Q99836	296 aa		11.9	□□□□□ -0.5
TOM1L1-223	ENST00000576932	ANKRD2	Q9GZV1	360 aa		11.9	□□□□□ -0.5
TOM1L1-223	ENST00000576932	NR2E3	Q9Y5X4	410 aa		11.9	□□□□□ -0.5
TOM1L1-223	ENST00000576932	KIF22	Q14807	665 aa		11.89	□□□□□ -0.51
TOM1L1-223	ENST00000576932	NBPF12	Q5TAG4	269 aa	Predicted RBP	11.89	□□□□□ -0.51
TOM1L1-223	ENST00000576932	DUSP27	Q5VZP5	1158 aa		11.89	□□□□□ -0.51
TOM1L1-223	ENST00000576932	POTEE	Q6S8J3	1075 aa		11.89	□□□□□ -0.51
TOM1L1-223	ENST00000576932	UBE2Q1	Q7Z7E8	422 aa		11.89	□□□□□ -0.51
TOM1L1-223	ENST00000576932	BRI3BP	Q8WY22	251 aa		11.89	□□□□□ -0.51
TOM1L1-223	ENST00000576932	OPTN	Q96CV9	577 aa		11.89	□□□□□ -0.51
TOM1L1-223	ENST00000576932	SHISA4	Q96DD7	197 aa		11.89	□□□□□ -0.51
TOM1L1-223	ENST00000576932	METTL22	Q9BUU2	404 aa	Predicted RBP	11.89	□□□□□ -0.51
TOM1L1-223	ENST00000576932	FAM198A	Q9UFP1	575 aa		11.89	□□□□□ -0.51
TOM1L1-223	ENST00000576932	MYH3	P11055	1940 aa		11.89	□□□□□ -0.51
TOM1L1-223	ENST00000576932	TLR2	O60603	784 aa		11.88	□□□□□ -0.51
TOM1L1-223	ENST00000576932	DDX58	O95786	925 aa	Known RBP	11.88	□□□□□ -0.51
TOM1L1-223	ENST00000576932	CAPN2	P17655	700 aa		11.88	□□□□□ -0.51
TOM1L1-223	ENST00000576932	IGHMBP2	P38935	993 aa	Known RBP	11.88	□□□□□ -0.51
TOM1L1-223	ENST00000576932	LACTB	P83111	547 aa	Predicted RBP	11.88	□□□□□ -0.51
TOM1L1-223	ENST00000576932	TNFAIP1	Q13829	316 aa		11.88	□□□□□ -0.51
TOM1L1-223	ENST00000576932	DIXDC1	Q155Q3	683 aa		11.88	□□□□□ -0.51
TOM1L1-223	ENST00000576932	C15orf52	Q6ZUT6	534 aa	Known RBP	11.88	□□□□□ -0.51
TOM1L1-223	ENST00000576932	SH3TC2	Q8TF17	1288 aa		11.88	□□□□□ -0.51
TOM1L1-223	ENST00000576932	CHMP4A	Q9BY43	222 aa		11.88	□□□□□ -0.51
TOM1L1-223	ENST00000576932	GREM2	Q9H772	168 aa		11.88	□□□□□ -0.51
TOM1L1-223	ENST00000576932	CD209	Q9NNX6	404 aa		11.88	□□□□□ -0.51
TOM1L1-223	ENST00000576932	OTOF	Q9HC10	1997 aa		11.88	□□□□□ -0.51
TOM1L1-223	ENST00000576932	CCL15-CCL14	A0A0B4J2E2	113 aa		11.87	□□□□□ -0.51
TOM1L1-223	ENST00000576932	GJA8	P48165	433 aa		11.87	□□□□□ -0.51
TOM1L1-223	ENST00000576932	RASA3	Q14644	834 aa		11.87	□□□□□ -0.51
TOM1L1-223	ENST00000576932	CCL15	Q16663	113 aa		11.87	□□□□□ -0.51
TOM1L1-223	ENST00000576932	CFAP100	Q494V2	611 aa		11.87	□□□□□ -0.51
TOM1L1-223	ENST00000576932	CERS5	Q8N5B7	392 aa		11.87	□□□□□ -0.51
TOM1L1-223	ENST00000576932	HELB	Q8NG08	1087 aa	Predicted RBP	11.87	□□□□□ -0.51
TOM1L1-223	ENST00000576932	TMEM134	Q9H6X4	195 aa		11.87	□□□□□ -0.51
TOM1L1-223	ENST00000576932	PHAX	Q9H814	394 aa	Known RBP	11.87	□□□□□ -0.51
TOM1L1-223	ENST00000576932	ELP3	Q9H9T3	547 aa		11.87	□□□□□ -0.51
TOM1L1-223	ENST00000576932	SPEF2	Q9C093	1822 aa		11.86	□□□□□ -0.51
TOM1L1-223	ENST00000576932	POTEB3	A0JP26	581 aa		11.86	□□□□□ -0.51
TOM1L1-223	ENST00000576932	CLRN2	A0PK11	232 aa		11.86	□□□□□ -0.51
TOM1L1-223	ENST00000576932	GJB1	P08034	283 aa		11.86	□□□□□ -0.51
TOM1L1-223	ENST00000576932	POTEB	Q6S5H4	581 aa		11.86	□□□□□ -0.51
TOM1L1-223	ENST00000576932	PPP1R3F	Q6ZSY5	799 aa	Predicted RBP	11.86	□□□□□ -0.51
TOM1L1-223	ENST00000576932	SLF2	Q8IX21	1173 aa		11.86	□□□□□ -0.51

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