RNA–Protein interactions for RNA: ENST00000574668.1

TMEM88-202, Transcript of transmembrane protein 88, humanhuman

TSL 2 BASIC

Gene TMEM88, Length 510 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88-202ENST00000574668 TDRD7Q8NHU6 1098 aaKnown RBP20.38■□□□□ 0.85
TMEM88-202ENST00000574668 WNK4Q96J92 1243 aa20.38■□□□□ 0.85
TMEM88-202ENST00000574668 IQSEC3Q9UPP2 1182 aaPredicted RBP20.38■□□□□ 0.85
TMEM88-202ENST00000574668 IGF2BP3O00425 579 aaKnown RBP eCLIP20.37■□□□□ 0.85
TMEM88-202ENST00000574668 PHKA1P46020 1223 aa20.37■□□□□ 0.85
TMEM88-202ENST00000574668 RBM5P52756 815 aaKnown RBP eCLIP20.37■□□□□ 0.85
TMEM88-202ENST00000574668 TTC39AQ5SRH9 613 aa20.37■□□□□ 0.85
TMEM88-202ENST00000574668 ANKRD45Q5TZF3 282 aa20.37■□□□□ 0.85
TMEM88-202ENST00000574668 CCDC102BQ68D86 513 aa20.37■□□□□ 0.85
TMEM88-202ENST00000574668 IFNL1Q8IU54 200 aa20.37■□□□□ 0.85
TMEM88-202ENST00000574668 DBNDD2Q9BQY9 259 aa20.37■□□□□ 0.85
TMEM88-202ENST00000574668 MANSC4A6NHS7 340 aaPredicted RBP20.36■□□□□ 0.85
TMEM88-202ENST00000574668 MYO1BO43795 1136 aa20.36■□□□□ 0.85
TMEM88-202ENST00000574668 PPP1R12BO60237 982 aaPredicted RBP20.36■□□□□ 0.85
TMEM88-202ENST00000574668 CHAF1AQ13111 956 aaPredicted RBP20.36■□□□□ 0.85
TMEM88-202ENST00000574668 PPP2R3BQ9Y5P8 575 aa20.36■□□□□ 0.85
TMEM88-202ENST00000574668 ALDH1A1P00352 501 aa20.35■□□□□ 0.85
TMEM88-202ENST00000574668 GJA5P36382 358 aa20.35■□□□□ 0.85
TMEM88-202ENST00000574668 FKBP1AP62942 108 aaKnown RBP20.35■□□□□ 0.85
TMEM88-202ENST00000574668 USP2O75604 605 aaPredicted RBP20.34■□□□□ 0.85
TMEM88-202ENST00000574668 UQCRFS1P1P0C7P4 283 aa20.34■□□□□ 0.85
TMEM88-202ENST00000574668 ZBTB48P10074 688 aaPredicted RBP20.34■□□□□ 0.85
TMEM88-202ENST00000574668 RASA3Q14644 834 aa20.34■□□□□ 0.85
TMEM88-202ENST00000574668 SUPT20HL1Q3ZLR7 823 aa20.34■□□□□ 0.85
TMEM88-202ENST00000574668 PRPF38BQ5VTL8 546 aaKnown RBP20.34■□□□□ 0.85
TMEM88-202ENST00000574668 B4GALNT3Q6L9W6 998 aa20.34■□□□□ 0.85
TMEM88-202ENST00000574668 SMC5Q8IY18 1101 aa20.34■□□□□ 0.85
TMEM88-202ENST00000574668 TLR7Q9NYK1 1049 aaKnown RBP20.34■□□□□ 0.85
TMEM88-202ENST00000574668 DBNLQ9UJU6 430 aaKnown RBP20.34■□□□□ 0.85
TMEM88-202ENST00000574668 DENND2AQ9ULE3 1009 aa20.34■□□□□ 0.85
TMEM88-202ENST00000574668 PDE4DIPQ5VU43 2346 aa20.34■□□□□ 0.85
TMEM88-202ENST00000574668 ECM29Q5VYK3 1845 aa20.34■□□□□ 0.85
TMEM88-202ENST00000574668 SEMA3EO15041 775 aa20.33■□□□□ 0.85
TMEM88-202ENST00000574668 INHBEP58166 350 aa20.33■□□□□ 0.85
TMEM88-202ENST00000574668 ERICH6BQ5W0A0 696 aa20.33■□□□□ 0.85
TMEM88-202ENST00000574668 CDAN1Q8IWY9 1227 aa20.33■□□□□ 0.85
TMEM88-202ENST00000574668 TRIM17Q9Y577 477 aa20.33■□□□□ 0.85
TMEM88-202ENST00000574668 FAM205AQ6ZU69 1335 aa20.32■□□□□ 0.84
TMEM88-202ENST00000574668 MFSD14BQ5SR56 506 aa20.32■□□□□ 0.84
TMEM88-202ENST00000574668 OTOP1Q7RTM1 612 aa20.32■□□□□ 0.84
TMEM88-202ENST00000574668 IREB2P48200 963 aaKnown RBP20.31■□□□□ 0.84
TMEM88-202ENST00000574668 WDR66Q8TBY9 1149 aa20.31■□□□□ 0.84
TMEM88-202ENST00000574668 TBC1D22AQ8WUA7 517 aa20.31■□□□□ 0.84
TMEM88-202ENST00000574668 CCDC136Q96JN2 1154 aa20.31■□□□□ 0.84
TMEM88-202ENST00000574668 PTPN18Q99952 460 aa20.31■□□□□ 0.84
TMEM88-202ENST00000574668 TDRD3Q9H7E2 651 aaKnown RBP20.31■□□□□ 0.84
TMEM88-202ENST00000574668 ZNF70Q9UC06 446 aaPredicted RBP20.31■□□□□ 0.84
TMEM88-202ENST00000574668 TTF2Q9UNY4 1162 aaKnown RBP20.31■□□□□ 0.84
TMEM88-202ENST00000574668 ARAP2Q8WZ64 1704 aa20.3■□□□□ 0.84
TMEM88-202ENST00000574668 ARID4AP29374 1257 aaPredicted RBP20.3■□□□□ 0.84
TMEM88-202ENST00000574668 CRHR2Q13324 411 aa20.3■□□□□ 0.84
TMEM88-202ENST00000574668 SPDYE2Q495Y8 402 aa20.3■□□□□ 0.84
TMEM88-202ENST00000574668 GPATCH3Q96I76 525 aa20.3■□□□□ 0.84
TMEM88-202ENST00000574668 ELP3Q9H9T3 547 aa20.3■□□□□ 0.84
TMEM88-202ENST00000574668 CAP1Q01518 475 aa20.29■□□□□ 0.84
TMEM88-202ENST00000574668 RASGRF1Q13972 1273 aa20.29■□□□□ 0.84
TMEM88-202ENST00000574668 GRIK5Q16478 980 aa20.29■□□□□ 0.84
TMEM88-202ENST00000574668 ANKRD13AQ8IZ07 590 aa20.29■□□□□ 0.84
TMEM88-202ENST00000574668 CD99L2Q8TCZ2 262 aa20.29■□□□□ 0.84
TMEM88-202ENST00000574668 HTTP42858 3142 aa20.29■□□□□ 0.84
TMEM88-202ENST00000574668 UNCXA6NJT0 531 aa20.28■□□□□ 0.84
TMEM88-202ENST00000574668 TCP10L2B9ZVM9 353 aa20.28■□□□□ 0.84
TMEM88-202ENST00000574668 ZBTB22O15209 634 aa20.28■□□□□ 0.84
TMEM88-202ENST00000574668 SPATA5Q8NB90 893 aa20.28■□□□□ 0.84
TMEM88-202ENST00000574668 CNKSR2Q8WXI2 1034 aa20.28■□□□□ 0.84
TMEM88-202ENST00000574668 OPTNQ96CV9 577 aa20.28■□□□□ 0.84
TMEM88-202ENST00000574668 ZNF512BQ96KM6 892 aaPredicted RBP20.28■□□□□ 0.84
TMEM88-202ENST00000574668 TEPSINQ96N21 525 aa20.28■□□□□ 0.84
TMEM88-202ENST00000574668 LNPKQ9C0E8 428 aa20.28■□□□□ 0.84
TMEM88-202ENST00000574668 HMG20BQ9P0W2 317 aa20.28■□□□□ 0.84
TMEM88-202ENST00000574668 SERPINA10Q9UK55 444 aa20.28■□□□□ 0.84
TMEM88-202ENST00000574668 LAMB1P07942 1786 aa20.28■□□□□ 0.84
TMEM88-202ENST00000574668 OTOFQ9HC10 1997 aa20.27■□□□□ 0.84
TMEM88-202ENST00000574668 POTEFA5A3E0 1075 aa20.27■□□□□ 0.84
TMEM88-202ENST00000574668 MCAMP43121 646 aa20.27■□□□□ 0.84
TMEM88-202ENST00000574668 NUCB1Q02818 461 aa20.27■□□□□ 0.84
TMEM88-202ENST00000574668 CHD1LQ86WJ1 897 aa20.27■□□□□ 0.84
TMEM88-202ENST00000574668 TMEM39BQ9GZU3 492 aa20.27■□□□□ 0.84
TMEM88-202ENST00000574668 SNRKQ9NRH2 765 aa20.27■□□□□ 0.84
TMEM88-202ENST00000574668 PPP4R2Q9NY27 417 aa20.27■□□□□ 0.84
TMEM88-202ENST00000574668 PDS5AQ29RF7 1337 aaKnown RBP20.27■□□□□ 0.83
TMEM88-202ENST00000574668 CRKP46108 304 aa20.26■□□□□ 0.83
TMEM88-202ENST00000574668 TNFAIP1Q13829 316 aa20.26■□□□□ 0.83
TMEM88-202ENST00000574668 ZGPATQ8N5A5 531 aaKnown RBP20.26■□□□□ 0.83
TMEM88-202ENST00000574668 ECHDC1Q9NTX5 307 aa20.26■□□□□ 0.83
TMEM88-202ENST00000574668 PTPN22Q9Y2R2 807 aa20.26■□□□□ 0.83
TMEM88-202ENST00000574668 TESPA1A2RU30 521 aaPredicted RBP20.25■□□□□ 0.83
TMEM88-202ENST00000574668 SPTY2D1Q68D10 685 aaPredicted RBP20.25■□□□□ 0.83
TMEM88-202ENST00000574668 OTUD7BQ6GQQ9 843 aa20.25■□□□□ 0.83
TMEM88-202ENST00000574668 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.25■□□□□ 0.83
TMEM88-202ENST00000574668 CENPQQ7L2Z9 268 aaPredicted RBP20.25■□□□□ 0.83
TMEM88-202ENST00000574668 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.25■□□□□ 0.83
TMEM88-202ENST00000574668 ERO1AQ96HE7 468 aa20.25■□□□□ 0.83
TMEM88-202ENST00000574668 ABCF2Q9UG63 623 aa20.25■□□□□ 0.83
TMEM88-202ENST00000574668 ATP5JP18859 108 aa20.24■□□□□ 0.83
TMEM88-202ENST00000574668 ZAP70P43403 619 aa20.24■□□□□ 0.83
TMEM88-202ENST00000574668 CACNB3P54284 484 aa20.24■□□□□ 0.83
TMEM88-202ENST00000574668 VGLL4Q14135 290 aa20.24■□□□□ 0.83
TMEM88-202ENST00000574668 PI16Q6UXB8 463 aa20.24■□□□□ 0.83
TMEM88-202ENST00000574668 MS4A4AQ96JQ5 239 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms