RNA–Protein interactions for RNA: ENST00000563825.1

AC009117.3-202, humanhuman

TSL 4 BASIC

Gene AC009117.3, Length 557 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009117.3-202ENST00000563825 XPCQ01831 940 aaPredicted RBP6.66□□□□□ -1.34
AC009117.3-202ENST00000563825 NOLC1Q14978 699 aaKnown RBP eCLIP6.66□□□□□ -1.34
AC009117.3-202ENST00000563825 LARP1Q6PKG0 1096 aaKnown RBP6.66□□□□□ -1.34
AC009117.3-202ENST00000563825 CWC27Q6UX04 472 aaKnown RBP6.66□□□□□ -1.34
AC009117.3-202ENST00000563825 NOL8Q76FK4 1167 aaKnown RBP6.66□□□□□ -1.34
AC009117.3-202ENST00000563825 PHTF2Q8N3S3 785 aa6.66□□□□□ -1.34
AC009117.3-202ENST00000563825 MYRIPQ8NFW9 859 aa6.66□□□□□ -1.34
AC009117.3-202ENST00000563825 LTV1Q96GA3 475 aaPredicted RBP6.66□□□□□ -1.34
AC009117.3-202ENST00000563825 JAKMIP1Q96N16 626 aaKnown RBP6.66□□□□□ -1.34
AC009117.3-202ENST00000563825 INSM2Q96T92 566 aaPredicted RBP6.66□□□□□ -1.34
AC009117.3-202ENST00000563825 FUCA2Q9BTY2 467 aa6.66□□□□□ -1.34
AC009117.3-202ENST00000563825 DDX21Q9NR30 783 aaKnown RBP eCLIP6.66□□□□□ -1.34
AC009117.3-202ENST00000563825 DDX19AQ9NUU7 478 aaKnown RBP6.66□□□□□ -1.34
AC009117.3-202ENST00000563825 CHPF2Q9P2E5 772 aa6.66□□□□□ -1.34
AC009117.3-202ENST00000563825 CNPY2Q9Y2B0 182 aa6.66□□□□□ -1.34
AC009117.3-202ENST00000563825 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.66□□□□□ -1.34
AC009117.3-202ENST00000563825 HEG1Q9ULI3 1381 aa6.66□□□□□ -1.34
AC009117.3-202ENST00000563825 H3BM21 787 aa6.65□□□□□ -1.34
AC009117.3-202ENST00000563825 GRM8O00222 908 aa6.65□□□□□ -1.34
AC009117.3-202ENST00000563825 ADH1AP07327 375 aa6.65□□□□□ -1.34
AC009117.3-202ENST00000563825 GJB2P29033 226 aa6.65□□□□□ -1.34
AC009117.3-202ENST00000563825 GTF2F1P35269 517 aaKnown RBP eCLIP6.65□□□□□ -1.34
AC009117.3-202ENST00000563825 SOX11P35716 441 aa6.65□□□□□ -1.34
AC009117.3-202ENST00000563825 SCTRP47872 440 aa6.65□□□□□ -1.34
AC009117.3-202ENST00000563825 KCNJ4P48050 445 aa6.65□□□□□ -1.34
AC009117.3-202ENST00000563825 NBPF6Q5VWK0 638 aa6.65□□□□□ -1.34
AC009117.3-202ENST00000563825 LARP1BQ659C4 914 aaKnown RBP6.65□□□□□ -1.34
AC009117.3-202ENST00000563825 CREB3L3Q68CJ9 461 aa6.65□□□□□ -1.34
AC009117.3-202ENST00000563825 ATL3Q6DD88 541 aa6.65□□□□□ -1.34
AC009117.3-202ENST00000563825 PRPF40BQ6NWY9 871 aaKnown RBP6.65□□□□□ -1.34
AC009117.3-202ENST00000563825 BLOC1S2Q6QNY1 142 aa6.65□□□□□ -1.34
AC009117.3-202ENST00000563825 ZNF592Q92610 1267 aa6.65□□□□□ -1.34
AC009117.3-202ENST00000563825 NBPF4Q96M43 638 aa6.65□□□□□ -1.34
AC009117.3-202ENST00000563825 CCDC85AQ96PX6 553 aaPredicted RBP6.65□□□□□ -1.34
AC009117.3-202ENST00000563825 CDCA7Q9BWT1 371 aaPredicted RBP6.65□□□□□ -1.34
AC009117.3-202ENST00000563825 LGR6Q9HBX8 967 aa6.65□□□□□ -1.34
AC009117.3-202ENST00000563825 SPG7Q9UQ90 795 aa6.65□□□□□ -1.34
AC009117.3-202ENST00000563825 KIF3AQ9Y496 699 aa6.65□□□□□ -1.34
AC009117.3-202ENST00000563825 RBM8AQ9Y5S9 174 aaKnown RBP6.65□□□□□ -1.34
AC009117.3-202ENST00000563825 CACNA1FO60840 1977 aa6.65□□□□□ -1.34
AC009117.3-202ENST00000563825 NWD1Q149M9 1564 aa6.65□□□□□ -1.35
AC009117.3-202ENST00000563825 LRRC37A3O60309 1634 aa6.65□□□□□ -1.35
AC009117.3-202ENST00000563825 UBR1Q8IWV7 1749 aa6.64□□□□□ -1.35
AC009117.3-202ENST00000563825 GOLGA6L4A6NEF3 574 aa6.64□□□□□ -1.35
AC009117.3-202ENST00000563825 SLC27A2O14975 620 aa6.64□□□□□ -1.35
AC009117.3-202ENST00000563825 MAP4K4O95819 1239 aaPredicted RBP6.64□□□□□ -1.35
AC009117.3-202ENST00000563825 KCNA6P17658 529 aa6.64□□□□□ -1.35
AC009117.3-202ENST00000563825 PTH1RQ03431 593 aa6.64□□□□□ -1.35
AC009117.3-202ENST00000563825 PSME1Q06323 249 aa6.64□□□□□ -1.35
AC009117.3-202ENST00000563825 NEXNQ0ZGT2 675 aa6.64□□□□□ -1.35
AC009117.3-202ENST00000563825 MAP3K11Q16584 847 aa6.64□□□□□ -1.35
AC009117.3-202ENST00000563825 AACSQ86V21 672 aa6.64□□□□□ -1.35
AC009117.3-202ENST00000563825 ARHGEF25Q86VW2 580 aa6.64□□□□□ -1.35
AC009117.3-202ENST00000563825 CCDC83Q8IWF9 413 aa6.64□□□□□ -1.35
AC009117.3-202ENST00000563825 NPAS3Q8IXF0 933 aa6.64□□□□□ -1.35
AC009117.3-202ENST00000563825 FAM200AQ8TCP9 573 aa6.64□□□□□ -1.35
AC009117.3-202ENST00000563825 CHAMP1Q96JM3 812 aa6.64□□□□□ -1.35
AC009117.3-202ENST00000563825 IL25Q9H293 177 aa6.64□□□□□ -1.35
AC009117.3-202ENST00000563825 ZSCAN16Q9H4T2 348 aaPredicted RBP6.64□□□□□ -1.35
AC009117.3-202ENST00000563825 MAP3K2Q9Y2U5 619 aa6.64□□□□□ -1.35
AC009117.3-202ENST00000563825 ADCY9O60503 1353 aa6.64□□□□□ -1.35
AC009117.3-202ENST00000563825 RFX7Q2KHR2 1363 aa6.64□□□□□ -1.35
AC009117.3-202ENST00000563825 PLEKHG2Q9H7P9 1386 aa6.64□□□□□ -1.35
AC009117.3-202ENST00000563825 POM121CA8CG34 1229 aa6.63□□□□□ -1.35
AC009117.3-202ENST00000563825 CTAGE5O15320 804 aa6.63□□□□□ -1.35
AC009117.3-202ENST00000563825 FIBPO43427 364 aa6.63□□□□□ -1.35
AC009117.3-202ENST00000563825 PPFIA3O75145 1194 aa6.63□□□□□ -1.35
AC009117.3-202ENST00000563825 HMGB1P09429 215 aaKnown RBP6.63□□□□□ -1.35
AC009117.3-202ENST00000563825 HCLS1P14317 486 aaPredicted RBP6.63□□□□□ -1.35
AC009117.3-202ENST00000563825 ATP5JP18859 108 aa6.63□□□□□ -1.35
AC009117.3-202ENST00000563825 RPS6KB1P23443 525 aa6.63□□□□□ -1.35
AC009117.3-202ENST00000563825 COL15A1P39059 1388 aa6.63□□□□□ -1.35
AC009117.3-202ENST00000563825 ERVK-9P63128 1117 aa6.63□□□□□ -1.35
AC009117.3-202ENST00000563825 DNM1Q05193 864 aaKnown RBP6.63□□□□□ -1.35
AC009117.3-202ENST00000563825 CHAF1AQ13111 956 aaPredicted RBP6.63□□□□□ -1.35
AC009117.3-202ENST00000563825 ME3Q16798 604 aa6.63□□□□□ -1.35
AC009117.3-202ENST00000563825 DNTTIP2Q5QJE6 756 aaKnown RBP6.63□□□□□ -1.35
AC009117.3-202ENST00000563825 NUTM2GQ5VZR2 741 aa6.63□□□□□ -1.35
AC009117.3-202ENST00000563825 USPL1Q5W0Q7 1092 aa6.63□□□□□ -1.35
AC009117.3-202ENST00000563825 RBM43Q6ZSC3 357 aaKnown RBP6.63□□□□□ -1.35
AC009117.3-202ENST00000563825 NPHP3Q7Z494 1330 aa6.63□□□□□ -1.35
AC009117.3-202ENST00000563825 ARHGAP30Q7Z6I6 1101 aaPredicted RBP6.63□□□□□ -1.35
AC009117.3-202ENST00000563825 ANKLE2Q86XL3 938 aa6.63□□□□□ -1.35
AC009117.3-202ENST00000563825 SLC16A10Q8TF71 515 aa6.63□□□□□ -1.35
AC009117.3-202ENST00000563825 LMTK3Q96Q04 1460 aa6.63□□□□□ -1.35
AC009117.3-202ENST00000563825 LLPHQ9BRT6 129 aaKnown RBP6.63□□□□□ -1.35
AC009117.3-202ENST00000563825 NUP62CLQ9H1M0 184 aa6.63□□□□□ -1.35
AC009117.3-202ENST00000563825 FAM13BQ9NYF5 915 aa6.63□□□□□ -1.35
AC009117.3-202ENST00000563825 PCDHB11Q9Y5F2 797 aa6.63□□□□□ -1.35
AC009117.3-202ENST00000563825 VPS37CA5D8V6 355 aaPredicted RBP6.62□□□□□ -1.35
AC009117.3-202ENST00000563825 KCNQ3O43525 872 aa6.62□□□□□ -1.35
AC009117.3-202ENST00000563825 NEMFO60524 1076 aa6.62□□□□□ -1.35
AC009117.3-202ENST00000563825 TAF5LO75529 589 aa6.62□□□□□ -1.35
AC009117.3-202ENST00000563825 GCP02774 474 aa6.62□□□□□ -1.35
AC009117.3-202ENST00000563825 GMPRP36959 345 aa6.62□□□□□ -1.35
AC009117.3-202ENST00000563825 CEBPAP49715 358 aaPredicted RBP6.62□□□□□ -1.35
AC009117.3-202ENST00000563825 SEMA3FQ13275 785 aa6.62□□□□□ -1.35
AC009117.3-202ENST00000563825 NMIQ13287 307 aaPredicted RBP6.62□□□□□ -1.35
AC009117.3-202ENST00000563825 DHX8Q14562 1220 aaKnown RBP6.62□□□□□ -1.35
AC009117.3-202ENST00000563825 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms