RNA–Protein interactions for RNA: ENST00000562638.5

TCF4-215, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 401 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-215ENST00000562638 H3BQF6 201 aa5.62□□□□□ -1.51
TCF4-215ENST00000562638 K7ELQ4 463 aaPredicted RBP5.62□□□□□ -1.51
TCF4-215ENST00000562638 P4HA2O15460 535 aa5.62□□□□□ -1.51
TCF4-215ENST00000562638 PLIN1O60240 522 aa5.62□□□□□ -1.51
TCF4-215ENST00000562638 MGRN1O60291 552 aa5.62□□□□□ -1.51
TCF4-215ENST00000562638 CEP104O60308 925 aa5.62□□□□□ -1.51
TCF4-215ENST00000562638 MTA2O94776 668 aa5.62□□□□□ -1.51
TCF4-215ENST00000562638 CSB-PGBD3P0DP91 1061 aa5.62□□□□□ -1.51
TCF4-215ENST00000562638 CHGAP10645 457 aaKnown RBP5.62□□□□□ -1.51
TCF4-215ENST00000562638 BCRP11274 1271 aa5.62□□□□□ -1.51
TCF4-215ENST00000562638 TRIM21P19474 475 aaKnown RBP5.62□□□□□ -1.51
TCF4-215ENST00000562638 CLK1P49759 484 aaKnown RBP5.62□□□□□ -1.51
TCF4-215ENST00000562638 SCNN1BP51168 640 aa5.62□□□□□ -1.51
TCF4-215ENST00000562638 NEK2P51955 445 aa5.62□□□□□ -1.51
TCF4-215ENST00000562638 SMTNP53814 917 aa5.62□□□□□ -1.51
TCF4-215ENST00000562638 EIF4G2P78344 907 aaKnown RBP eCLIP5.62□□□□□ -1.513e-7■■■■■ 40.1
TCF4-215ENST00000562638 MECOMQ03112 1051 aa5.62□□□□□ -1.51
TCF4-215ENST00000562638 CUL3Q13618 768 aa5.62□□□□□ -1.51
TCF4-215ENST00000562638 CUL4BQ13620 913 aa5.62□□□□□ -1.51
TCF4-215ENST00000562638 GNPTABQ3T906 1256 aa5.62□□□□□ -1.51
TCF4-215ENST00000562638 USH1GQ495M9 461 aa5.62□□□□□ -1.51
TCF4-215ENST00000562638 CCDC38Q502W7 563 aa5.62□□□□□ -1.51
TCF4-215ENST00000562638 THEMIS2Q5TEJ8 643 aa5.62□□□□□ -1.51
TCF4-215ENST00000562638 DUSP27Q5VZP5 1158 aa5.62□□□□□ -1.51
TCF4-215ENST00000562638 CREB3L3Q68CJ9 461 aa5.62□□□□□ -1.51
TCF4-215ENST00000562638 CAPRIN2Q6IMN6 1127 aaKnown RBP5.62□□□□□ -1.51
TCF4-215ENST00000562638 CC2D1AQ6P1N0 951 aaPredicted RBP5.62□□□□□ -1.51
TCF4-215ENST00000562638 SEPT14Q6ZU15 432 aa5.62□□□□□ -1.51
TCF4-215ENST00000562638 YTHDF3Q7Z739 585 aaKnown RBP5.62□□□□□ -1.51
TCF4-215ENST00000562638 TRMT2AQ8IZ69 625 aaKnown RBP5.62□□□□□ -1.51
TCF4-215ENST00000562638 USP33Q8TEY7 942 aa5.62□□□□□ -1.51
TCF4-215ENST00000562638 ACSBG1Q96GR2 724 aa5.62□□□□□ -1.51
TCF4-215ENST00000562638 CDK5RAP3Q96JB5 506 aa5.62□□□□□ -1.51
TCF4-215ENST00000562638 TTC14Q96N46 770 aa5.62□□□□□ -1.51
TCF4-215ENST00000562638 OXCT2Q9BYC2 517 aaPredicted RBP5.62□□□□□ -1.51
TCF4-215ENST00000562638 INO80BQ9C086 356 aaPredicted RBP5.62□□□□□ -1.51
TCF4-215ENST00000562638 LRRCC1Q9C099 1032 aa5.62□□□□□ -1.51
TCF4-215ENST00000562638 MRPL46Q9H2W6 279 aaKnown RBP5.62□□□□□ -1.51
TCF4-215ENST00000562638 PCDH18Q9HCL0 1135 aa5.62□□□□□ -1.51
TCF4-215ENST00000562638 ZCCHC17Q9NP64 241 aaKnown RBP5.62□□□□□ -1.51
TCF4-215ENST00000562638 DKK3Q9UBP4 350 aa5.62□□□□□ -1.51
TCF4-215ENST00000562638 DDX20Q9UHI6 824 aaKnown RBP5.62□□□□□ -1.51
TCF4-215ENST00000562638 AMOTL2Q9Y2J4 779 aa5.62□□□□□ -1.51
TCF4-215ENST00000562638 FAN1Q9Y2M0 1017 aa5.62□□□□□ -1.51
TCF4-215ENST00000562638 MRFAP1Q9Y605 127 aa5.62□□□□□ -1.51
TCF4-215ENST00000562638 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP5.62□□□□□ -1.51
TCF4-215ENST00000562638 TCOF1Q13428 1488 aaKnown RBP5.62□□□□□ -1.51
TCF4-215ENST00000562638 E9PCH4 1651 aa5.62□□□□□ -1.51
TCF4-215ENST00000562638 CCDC194A0A1B0GVG4 234 aa5.61□□□□□ -1.51
TCF4-215ENST00000562638 CHL1O00533 1208 aa5.61□□□□□ -1.51
TCF4-215ENST00000562638 ABLIM1O14639 778 aa5.61□□□□□ -1.51
TCF4-215ENST00000562638 SART1O43290 800 aaKnown RBP5.61□□□□□ -1.51
TCF4-215ENST00000562638 TBC1D12O60347 775 aa5.61□□□□□ -1.51
TCF4-215ENST00000562638 EVI5O60447 810 aa5.61□□□□□ -1.51
TCF4-215ENST00000562638 PLXNC1O60486 1568 aa5.61□□□□□ -1.51
TCF4-215ENST00000562638 SLC34A2O95436 690 aa5.61□□□□□ -1.51
TCF4-215ENST00000562638 RPSAP08865 295 aaKnown RBP5.61□□□□□ -1.51
TCF4-215ENST00000562638 SYT1P21579 422 aa5.61□□□□□ -1.51
TCF4-215ENST00000562638 MCM3P25205 808 aa5.61□□□□□ -1.51
TCF4-215ENST00000562638 PBX2P40425 430 aa5.61□□□□□ -1.51
TCF4-215ENST00000562638 LIG3P49916 1009 aa5.61□□□□□ -1.51
TCF4-215ENST00000562638 DYNC1I2Q13409 638 aaKnown RBP5.61□□□□□ -1.51
TCF4-215ENST00000562638 IRF5Q13568 498 aa5.61□□□□□ -1.51
TCF4-215ENST00000562638 RCN1Q15293 331 aa5.61□□□□□ -1.51
TCF4-215ENST00000562638 KIF7Q2M1P5 1343 aa5.61□□□□□ -1.51
TCF4-215ENST00000562638 COBLL1Q53SF7 1204 aa5.61□□□□□ -1.51
TCF4-215ENST00000562638 SAMD9Q5K651 1589 aa5.61□□□□□ -1.51
TCF4-215ENST00000562638 MCTP1Q6DN14 999 aa5.61□□□□□ -1.51
TCF4-215ENST00000562638 ZNF662Q6ZS27 426 aa5.61□□□□□ -1.51
TCF4-215ENST00000562638 TMC6Q7Z403 805 aa5.61□□□□□ -1.51
TCF4-215ENST00000562638 ARHGAP30Q7Z6I6 1101 aaPredicted RBP5.61□□□□□ -1.51
TCF4-215ENST00000562638 PCGF5Q86SE9 256 aa5.61□□□□□ -1.51
TCF4-215ENST00000562638 RNF168Q8IYW5 571 aaPredicted RBP5.61□□□□□ -1.51
TCF4-215ENST00000562638 CEP112Q8N8E3 955 aa5.61□□□□□ -1.51
TCF4-215ENST00000562638 KRI1Q8N9T8 703 aaKnown RBP5.61□□□□□ -1.51
TCF4-215ENST00000562638 ZBTB8BQ8NAP8 495 aaPredicted RBP5.61□□□□□ -1.51
TCF4-215ENST00000562638 TRIM58Q8NG06 486 aa5.61□□□□□ -1.51
TCF4-215ENST00000562638 SH3TC1Q8TE82 1336 aa5.61□□□□□ -1.51
TCF4-215ENST00000562638 TRPC4APQ8TEL6 797 aa5.61□□□□□ -1.51
TCF4-215ENST00000562638 NAF1Q96HR8 494 aaKnown RBP5.61□□□□□ -1.51
TCF4-215ENST00000562638 SCYL1Q96KG9 808 aa5.61□□□□□ -1.51
TCF4-215ENST00000562638 C16orf45Q96MC5 204 aaPredicted RBP5.61□□□□□ -1.51
TCF4-215ENST00000562638 GSDMAQ96QA5 445 aa5.61□□□□□ -1.51
TCF4-215ENST00000562638 SPOCK3Q9BQ16 436 aa5.61□□□□□ -1.51
TCF4-215ENST00000562638 FUCA2Q9BTY2 467 aa5.61□□□□□ -1.51
TCF4-215ENST00000562638 GNL3Q9BVP2 549 aaKnown RBP eCLIP5.61□□□□□ -1.51
TCF4-215ENST00000562638 CAPS2Q9BXY5 557 aa5.61□□□□□ -1.51
TCF4-215ENST00000562638 QTRT2Q9H974 415 aaKnown RBP5.61□□□□□ -1.51
TCF4-215ENST00000562638 CD248Q9HCU0 757 aa5.61□□□□□ -1.51
TCF4-215ENST00000562638 TRMT1Q9NXH9 659 aaKnown RBP5.61□□□□□ -1.51
TCF4-215ENST00000562638 SEL1LQ9UBV2 794 aa5.61□□□□□ -1.51
TCF4-215ENST00000562638 TMCO1Q9UM00 188 aa5.61□□□□□ -1.51
TCF4-215ENST00000562638 TIMM22Q9Y584 194 aa5.61□□□□□ -1.51
TCF4-215ENST00000562638 REREQ9P2R6 1566 aa5.6□□□□□ -1.51
TCF4-215ENST00000562638 ARAP1Q96P48 1450 aa5.6□□□□□ -1.51
TCF4-215ENST00000562638 HFM1A2PYH4 1435 aa5.6□□□□□ -1.51
TCF4-215ENST00000562638 TMEM94Q12767 1356 aa5.6□□□□□ -1.51
TCF4-215ENST00000562638 ANKRD30AQ9BXX3 1397 aa5.6□□□□□ -1.51
TCF4-215ENST00000562638 GOLGA6L9A6NEM1 432 aa5.6□□□□□ -1.51
TCF4-215ENST00000562638 B4DLN1 442 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 118.8 ms