RNA–Protein interactions for RNA: ENST00000562046.1

CNOT1-203, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 5

Gene CNOT1, Length 578 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-203ENST00000562046 CBX8Q9HC52 389 aa7.22□□□□□ -1.25
CNOT1-203ENST00000562046 CAPN10Q9HC96 672 aa7.22□□□□□ -1.25
CNOT1-203ENST00000562046 KRT82Q9NSB4 513 aa7.22□□□□□ -1.25
CNOT1-203ENST00000562046 F13A1P00488 732 aa7.21□□□□□ -1.26
CNOT1-203ENST00000562046 RAC1P63000 192 aa7.21□□□□□ -1.26
CNOT1-203ENST00000562046 SEPT6Q14141 434 aa7.21□□□□□ -1.26
CNOT1-203ENST00000562046 MAP1SQ66K74 1059 aaPredicted RBP7.21□□□□□ -1.26
CNOT1-203ENST00000562046 FAM196AQ6ZSG2 479 aa7.21□□□□□ -1.26
CNOT1-203ENST00000562046 GOLM1Q8NBJ4 401 aa7.21□□□□□ -1.26
CNOT1-203ENST00000562046 GMLQ99445 158 aa7.21□□□□□ -1.26
CNOT1-203ENST00000562046 CORO1BQ9BR76 489 aa7.21□□□□□ -1.26
CNOT1-203ENST00000562046 MIR1-1HGQ9H1L0 117 aa7.21□□□□□ -1.26
CNOT1-203ENST00000562046 INPP5FQ9Y2H2 1132 aa7.21□□□□□ -1.26
CNOT1-203ENST00000562046 SUPT16HQ9Y5B9 1047 aaKnown RBP7.21□□□□□ -1.26
CNOT1-203ENST00000562046 SPDYE3A6NKU9 549 aa7.2□□□□□ -1.26
CNOT1-203ENST00000562046 FAM229AH3BQW9 127 aa7.2□□□□□ -1.26
CNOT1-203ENST00000562046 ZNF862O60290 1169 aa7.2□□□□□ -1.26
CNOT1-203ENST00000562046 CILPO75339 1184 aa7.2□□□□□ -1.26
CNOT1-203ENST00000562046 WISP1O95388 367 aa7.2□□□□□ -1.26
CNOT1-203ENST00000562046 ELNP15502 786 aa7.2□□□□□ -1.26
CNOT1-203ENST00000562046 CRKP46108 304 aa7.2□□□□□ -1.26
CNOT1-203ENST00000562046 INSM1Q01101 510 aaPredicted RBP7.2□□□□□ -1.26
CNOT1-203ENST00000562046 SNAP47Q5SQN1 464 aa7.2□□□□□ -1.26
CNOT1-203ENST00000562046 BEND7Q8N7W2 519 aaPredicted RBP7.2□□□□□ -1.26
CNOT1-203ENST00000562046 GPBAR1Q8TDU6 330 aa7.2□□□□□ -1.26
CNOT1-203ENST00000562046 UBASH3BQ8TF42 649 aa7.2□□□□□ -1.26
CNOT1-203ENST00000562046 GATAD2BQ8WXI9 593 aa7.2□□□□□ -1.26
CNOT1-203ENST00000562046 KCNB2Q92953 911 aa7.2□□□□□ -1.26
CNOT1-203ENST00000562046 GPRASP2Q96D09 838 aa7.2□□□□□ -1.26
CNOT1-203ENST00000562046 LRRC3Q9BY71 257 aa7.2□□□□□ -1.26
CNOT1-203ENST00000562046 ZC3H12CQ9C0D7 883 aaKnown RBP7.2□□□□□ -1.26
CNOT1-203ENST00000562046 PIK3R2O00459 728 aa7.19□□□□□ -1.26
CNOT1-203ENST00000562046 COL8A1P27658 744 aa7.19□□□□□ -1.26
CNOT1-203ENST00000562046 TRIM28Q13263 835 aaKnown RBP7.19□□□□□ -1.26
CNOT1-203ENST00000562046 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.19□□□□□ -1.26
CNOT1-203ENST00000562046 KIAA1211Q6ZU35 1233 aa7.19□□□□□ -1.26
CNOT1-203ENST00000562046 DCAF11Q8TEB1 546 aa7.19□□□□□ -1.26
CNOT1-203ENST00000562046 WDR89Q96FK6 387 aaPredicted RBP7.19□□□□□ -1.26
CNOT1-203ENST00000562046 USP26Q9BXU7 913 aa7.19□□□□□ -1.26
CNOT1-203ENST00000562046 UBP1Q9NZI7 540 aa7.19□□□□□ -1.26
CNOT1-203ENST00000562046 ROBO2Q9HCK4 1378 aa7.19□□□□□ -1.26
CNOT1-203ENST00000562046 ATF4P18848 351 aaPredicted RBP7.18□□□□□ -1.26
CNOT1-203ENST00000562046 LIG1P18858 919 aa7.18□□□□□ -1.26
CNOT1-203ENST00000562046 KIF4BQ2VIQ3 1234 aa7.18□□□□□ -1.26
CNOT1-203ENST00000562046 IGF2-ASQ6U949 168 aa7.18□□□□□ -1.26
CNOT1-203ENST00000562046 SLITRK4Q8IW52 837 aa7.18□□□□□ -1.26
CNOT1-203ENST00000562046 FBXO27Q8NI29 283 aa7.18□□□□□ -1.26
CNOT1-203ENST00000562046 JARID2Q92833 1246 aaPredicted RBP7.18□□□□□ -1.26
CNOT1-203ENST00000562046 NOP53Q9NZM5 478 aaKnown RBP7.18□□□□□ -1.26
CNOT1-203ENST00000562046 PCDHGC5Q9Y5F6 944 aa7.18□□□□□ -1.26
CNOT1-203ENST00000562046 SYNGAP1Q96PV0 1343 aa7.18□□□□□ -1.26
CNOT1-203ENST00000562046 MEGF11A6BM72 1044 aa7.17□□□□□ -1.26
CNOT1-203ENST00000562046 CDK8P49336 464 aa7.17□□□□□ -1.26
CNOT1-203ENST00000562046 GNL2Q13823 731 aaKnown RBP7.17□□□□□ -1.26
CNOT1-203ENST00000562046 MPP2Q14168 576 aa7.17□□□□□ -1.26
CNOT1-203ENST00000562046 DUOXA2Q1HG44 320 aa7.17□□□□□ -1.26
CNOT1-203ENST00000562046 EXOSC6Q5RKV6 272 aaKnown RBP7.17□□□□□ -1.26
CNOT1-203ENST00000562046 PODNQ7Z5L7 613 aa7.17□□□□□ -1.26
CNOT1-203ENST00000562046 SREK1Q8WXA9 508 aaKnown RBP7.17□□□□□ -1.26
CNOT1-203ENST00000562046 WDR18Q9BV38 432 aa7.17□□□□□ -1.26
CNOT1-203ENST00000562046 TMPRSS13Q9BYE2 586 aa7.17□□□□□ -1.26
CNOT1-203ENST00000562046 GFRA2O00451 464 aa7.16□□□□□ -1.26
CNOT1-203ENST00000562046 AOC2O75106 756 aa7.16□□□□□ -1.26
CNOT1-203ENST00000562046 LMNB1P20700 586 aa7.16□□□□□ -1.26
CNOT1-203ENST00000562046 RPL6Q02878 288 aaKnown RBP7.16□□□□□ -1.26
CNOT1-203ENST00000562046 PDE3AQ14432 1141 aa7.16□□□□□ -1.26
CNOT1-203ENST00000562046 GRIK4Q16099 956 aa7.16□□□□□ -1.26
CNOT1-203ENST00000562046 SHISA2Q6UWI4 295 aa7.16□□□□□ -1.26
CNOT1-203ENST00000562046 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.16□□□□□ -1.26
CNOT1-203ENST00000562046 TMEM130Q8N3G9 435 aa7.16□□□□□ -1.26
CNOT1-203ENST00000562046 SPATA32Q96LK8 384 aa7.16□□□□□ -1.26
CNOT1-203ENST00000562046 TLR3O15455 904 aaKnown RBP7.15□□□□□ -1.26
CNOT1-203ENST00000562046 IGSF3O75054 1194 aa7.15□□□□□ -1.26
CNOT1-203ENST00000562046 FGRP09769 529 aa7.15□□□□□ -1.26
CNOT1-203ENST00000562046 SPATA31C1P0DKV0 1188 aa7.15□□□□□ -1.26
CNOT1-203ENST00000562046 SOX9P48436 509 aa7.15□□□□□ -1.26
CNOT1-203ENST00000562046 APOBRQ0VD83 1088 aa7.15□□□□□ -1.26
CNOT1-203ENST00000562046 INPP5AQ14642 412 aa7.15□□□□□ -1.26
CNOT1-203ENST00000562046 ZC3H12AQ5D1E8 599 aaKnown RBP7.15□□□□□ -1.26
CNOT1-203ENST00000562046 PRRT3Q5FWE3 981 aa7.15□□□□□ -1.26
CNOT1-203ENST00000562046 REC114Q7Z4M0 266 aa7.15□□□□□ -1.26
CNOT1-203ENST00000562046 NKD1Q969G9 470 aa7.15□□□□□ -1.26
CNOT1-203ENST00000562046 SCARF2Q96GP6 870 aaPredicted RBP7.15□□□□□ -1.26
CNOT1-203ENST00000562046 SEC16BQ96JE7 1060 aa7.15□□□□□ -1.26
CNOT1-203ENST00000562046 RUSC1Q9BVN2 902 aa7.15□□□□□ -1.26
CNOT1-203ENST00000562046 MRPL18Q9H0U6 180 aaKnown RBP7.15□□□□□ -1.26
CNOT1-203ENST00000562046 GINM1Q9NU53 330 aa7.15□□□□□ -1.26
CNOT1-203ENST00000562046 PCDHA4Q9UN74 947 aa7.15□□□□□ -1.26
CNOT1-203ENST00000562046 ARID5AQ03989 594 aa7.14□□□□□ -1.27
CNOT1-203ENST00000562046 RING1Q06587 406 aa7.14□□□□□ -1.27
CNOT1-203ENST00000562046 HP1BP3Q5SSJ5 553 aaPredicted RBP7.14□□□□□ -1.27
CNOT1-203ENST00000562046 LRFN4Q6PJG9 635 aa7.14□□□□□ -1.27
CNOT1-203ENST00000562046 ACAD11Q709F0 780 aa7.14□□□□□ -1.27
CNOT1-203ENST00000562046 MCF2L2Q86YR7 1114 aa7.14□□□□□ -1.27
CNOT1-203ENST00000562046 LENG1Q96BZ8 264 aaPredicted RBP7.14□□□□□ -1.27
CNOT1-203ENST00000562046 SUGCTQ9HAC7 445 aa7.14□□□□□ -1.27
CNOT1-203ENST00000562046 PRKAG2Q9UGJ0 569 aa7.14□□□□□ -1.27
CNOT1-203ENST00000562046 EFR3BQ9Y2G0 817 aa7.14□□□□□ -1.27
CNOT1-203ENST00000562046 POLR3KQ9Y2Y1 108 aaPredicted RBP7.14□□□□□ -1.27
CNOT1-203ENST00000562046 SNCAIPQ9Y6H5 919 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms