RNA–Protein interactions for RNA: ENST00000560909.2

ZEB1-220, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 4

Gene ZEB1, Length 564 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-220ENST00000560909 DDR1Q08345 913 aa6.86□□□□□ -1.31
ZEB1-220ENST00000560909 HDAC1Q13547 482 aaPredicted RBP6.86□□□□□ -1.31
ZEB1-220ENST00000560909 MCTP1Q6DN14 999 aa6.86□□□□□ -1.31
ZEB1-220ENST00000560909 PPP1R42Q7Z4L9 355 aa6.86□□□□□ -1.31
ZEB1-220ENST00000560909 METTL3Q86U44 580 aaKnown RBP6.86□□□□□ -1.31
ZEB1-220ENST00000560909 SIRT2Q8IXJ6 389 aa6.86□□□□□ -1.31
ZEB1-220ENST00000560909 RPAP2Q8IXW5 612 aaPredicted RBP6.86□□□□□ -1.31
ZEB1-220ENST00000560909 ANKRD44Q8N8A2 993 aa6.86□□□□□ -1.31
ZEB1-220ENST00000560909 ACDQ96AP0 544 aa6.86□□□□□ -1.31
ZEB1-220ENST00000560909 SETDB2Q96T68 719 aa6.86□□□□□ -1.31
ZEB1-220ENST00000560909 UTP14AQ9BVJ6 771 aaKnown RBP6.86□□□□□ -1.31
ZEB1-220ENST00000560909 PDGFDQ9GZP0 370 aaPredicted RBP6.86□□□□□ -1.31
ZEB1-220ENST00000560909 C9orf78Q9NZ63 289 aaPredicted RBP6.86□□□□□ -1.31
ZEB1-220ENST00000560909 SCN7AQ01118 1682 aa6.86□□□□□ -1.31
ZEB1-220ENST00000560909 BCORQ6W2J9 1755 aa6.85□□□□□ -1.31
ZEB1-220ENST00000560909 ARFGEF2Q9Y6D5 1785 aa6.85□□□□□ -1.31
ZEB1-220ENST00000560909 CARMIL3Q8ND23 1372 aa6.85□□□□□ -1.31
ZEB1-220ENST00000560909 RTL9Q8NET4 1388 aa6.85□□□□□ -1.31
ZEB1-220ENST00000560909 NEFLP07196 543 aa6.85□□□□□ -1.31
ZEB1-220ENST00000560909 UBTFL1P0CB47 393 aaPredicted RBP6.85□□□□□ -1.31
ZEB1-220ENST00000560909 HSP90B1P14625 803 aaKnown RBP6.85□□□□□ -1.31
ZEB1-220ENST00000560909 GPTP24298 496 aa6.85□□□□□ -1.31
ZEB1-220ENST00000560909 CHRNA4P43681 627 aa6.85□□□□□ -1.31
ZEB1-220ENST00000560909 ATP8B2P98198 1209 aa6.85□□□□□ -1.31
ZEB1-220ENST00000560909 SF3B3Q15393 1217 aaKnown RBP6.85□□□□□ -1.31
ZEB1-220ENST00000560909 EPHA10Q5JZY3 1008 aa6.85□□□□□ -1.31
ZEB1-220ENST00000560909 CEP85Q6P2H3 762 aa6.85□□□□□ -1.31
ZEB1-220ENST00000560909 TPTE2Q6XPS3 522 aa6.85□□□□□ -1.31
ZEB1-220ENST00000560909 SSH3Q8TE77 659 aa6.85□□□□□ -1.31
ZEB1-220ENST00000560909 FAM89AQ96GI7 184 aa6.85□□□□□ -1.31
ZEB1-220ENST00000560909 SUCLG2Q96I99 432 aa6.85□□□□□ -1.31
ZEB1-220ENST00000560909 NYXQ9GZU5 481 aa6.85□□□□□ -1.31
ZEB1-220ENST00000560909 C4AP0C0L4 1744 aa6.84□□□□□ -1.31
ZEB1-220ENST00000560909 SOCS7O14512 581 aa6.84□□□□□ -1.31
ZEB1-220ENST00000560909 IRS4O14654 1257 aaPredicted RBP6.84□□□□□ -1.31
ZEB1-220ENST00000560909 PAX4O43316 350 aa6.84□□□□□ -1.31
ZEB1-220ENST00000560909 PDE8AO60658 829 aa6.84□□□□□ -1.31
ZEB1-220ENST00000560909 SERPINB2P05120 415 aa6.84□□□□□ -1.31
ZEB1-220ENST00000560909 RFX5P48382 616 aaPredicted RBP6.84□□□□□ -1.31
ZEB1-220ENST00000560909 IRX6P78412 446 aaPredicted RBP6.84□□□□□ -1.31
ZEB1-220ENST00000560909 CRY2Q49AN0 593 aa6.84□□□□□ -1.31
ZEB1-220ENST00000560909 PRR5LQ6MZQ0 368 aa6.84□□□□□ -1.31
ZEB1-220ENST00000560909 UBE3BQ7Z3V4 1068 aa6.84□□□□□ -1.31
ZEB1-220ENST00000560909 SYNE4Q8N205 404 aa6.84□□□□□ -1.31
ZEB1-220ENST00000560909 TTLL11Q8NHH1 800 aa6.84□□□□□ -1.31
ZEB1-220ENST00000560909 BAP1Q92560 729 aa6.84□□□□□ -1.31
ZEB1-220ENST00000560909 ARXQ96QS3 562 aa6.84□□□□□ -1.31
ZEB1-220ENST00000560909 PPP4R2Q9NY27 417 aa6.84□□□□□ -1.31
ZEB1-220ENST00000560909 TRMT112Q9UI30 125 aaKnown RBP6.84□□□□□ -1.31
ZEB1-220ENST00000560909 NOP58Q9Y2X3 529 aaKnown RBP6.84□□□□□ -1.31
ZEB1-220ENST00000560909 LRRFIP2Q9Y608 721 aaKnown RBP6.84□□□□□ -1.31
ZEB1-220ENST00000560909 NUP98P52948 1817 aa6.84□□□□□ -1.31
ZEB1-220ENST00000560909 TUBGCP6Q96RT7 1819 aa6.84□□□□□ -1.31
ZEB1-220ENST00000560909 SRCAPQ6ZRS2 3230 aa6.84□□□□□ -1.31
ZEB1-220ENST00000560909 COL24A1Q17RW2 1714 aa6.84□□□□□ -1.31
ZEB1-220ENST00000560909 KDM2BQ8NHM5 1336 aa6.83□□□□□ -1.32
ZEB1-220ENST00000560909 SPTLC1O15269 473 aa6.83□□□□□ -1.32
ZEB1-220ENST00000560909 MMP10P09238 476 aa6.83□□□□□ -1.32
ZEB1-220ENST00000560909 HOXA10P31260 410 aaPredicted RBP6.83□□□□□ -1.32
ZEB1-220ENST00000560909 ARID5BQ14865 1188 aa6.83□□□□□ -1.32
ZEB1-220ENST00000560909 R3HDM1Q15032 1099 aaKnown RBP6.83□□□□□ -1.32
ZEB1-220ENST00000560909 ERFEQ4G0M1 354 aa6.83□□□□□ -1.32
ZEB1-220ENST00000560909 NBPF5PQ86XG9 351 aaPredicted RBP6.83□□□□□ -1.32
ZEB1-220ENST00000560909 BRIP1Q9BX63 1249 aa6.83□□□□□ -1.32
ZEB1-220ENST00000560909 MTFR1LQ9H019 292 aa6.83□□□□□ -1.32
ZEB1-220ENST00000560909 BICC1Q9H694 974 aaKnown RBP6.83□□□□□ -1.32
ZEB1-220ENST00000560909 DCTPP1Q9H773 170 aa6.83□□□□□ -1.32
ZEB1-220ENST00000560909 COPRSQ9NQ92 184 aa6.83□□□□□ -1.32
ZEB1-220ENST00000560909 ABCC12Q96J65 1359 aa6.82□□□□□ -1.32
ZEB1-220ENST00000560909 NRXN2Q9P2S2 1712 aa6.82□□□□□ -1.32
ZEB1-220ENST00000560909 PNMA6EA0A0J9YXQ4 647 aa6.82□□□□□ -1.32
ZEB1-220ENST00000560909 IGHDP01880 384 aa6.82□□□□□ -1.32
ZEB1-220ENST00000560909 CTSWP56202 376 aa6.82□□□□□ -1.32
ZEB1-220ENST00000560909 LMBR1LQ6UX01 489 aa6.82□□□□□ -1.32
ZEB1-220ENST00000560909 NUTM1Q86Y26 1132 aa6.82□□□□□ -1.32
ZEB1-220ENST00000560909 SMC5Q8IY18 1101 aa6.82□□□□□ -1.32
ZEB1-220ENST00000560909 CNBD1Q8NA66 436 aa6.82□□□□□ -1.32
ZEB1-220ENST00000560909 JARID2Q92833 1246 aaPredicted RBP6.82□□□□□ -1.32
ZEB1-220ENST00000560909 KRTAP9-8Q9BYQ0 159 aa6.82□□□□□ -1.32
ZEB1-220ENST00000560909 ANKRD36CQ5JPF3 1778 aa6.82□□□□□ -1.32
ZEB1-220ENST00000560909 CASZ1Q86V15 1759 aa6.82□□□□□ -1.32
ZEB1-220ENST00000560909 HMMRO75330 724 aa6.81□□□□□ -1.32
ZEB1-220ENST00000560909 HCLS1P14317 486 aaPredicted RBP6.81□□□□□ -1.32
ZEB1-220ENST00000560909 PTPN12Q05209 780 aaKnown RBP6.81□□□□□ -1.32
ZEB1-220ENST00000560909 NR5A1Q13285 461 aa6.81□□□□□ -1.32
ZEB1-220ENST00000560909 BICDL1Q6ZP65 573 aa6.81□□□□□ -1.32
ZEB1-220ENST00000560909 SULF1Q8IWU6 871 aa6.81□□□□□ -1.32
ZEB1-220ENST00000560909 ZNF511Q8NB15 262 aa6.81□□□□□ -1.32
ZEB1-220ENST00000560909 FAM174AQ8TBP5 190 aa6.81□□□□□ -1.32
ZEB1-220ENST00000560909 NLRP3Q96P20 1036 aa6.81□□□□□ -1.32
ZEB1-220ENST00000560909 CDK15Q96Q40 435 aa6.81□□□□□ -1.32
ZEB1-220ENST00000560909 RWDD1Q9H446 243 aaPredicted RBP6.81□□□□□ -1.32
ZEB1-220ENST00000560909 C1orf115Q9H7X2 142 aa6.81□□□□□ -1.32
ZEB1-220ENST00000560909 GTF3C3Q9Y5Q9 886 aa6.81□□□□□ -1.32
ZEB1-220ENST00000560909 PARP3Q9Y6F1 533 aa6.81□□□□□ -1.32
ZEB1-220ENST00000560909 SRGAP3O43295 1099 aa6.8□□□□□ -1.32
ZEB1-220ENST00000560909 CIAO1O76071 339 aa6.8□□□□□ -1.32
ZEB1-220ENST00000560909 SRGNP10124 158 aa6.8□□□□□ -1.32
ZEB1-220ENST00000560909 HIC1Q14526 733 aa6.8□□□□□ -1.32
ZEB1-220ENST00000560909 CCDC152Q4G0S7 254 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 101.3 ms