RNA–Protein interactions for RNA: ENST00000557554.5

ABCD4-227, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 4

Gene ABCD4, Length 523 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-227ENST00000557554 NEUROD2Q15784 382 aa12.9□□□□□ -0.34
ABCD4-227ENST00000557554 CWF19L2Q2TBE0 894 aaKnown RBP12.9□□□□□ -0.34
ABCD4-227ENST00000557554 MFSD14BQ5SR56 506 aa12.9□□□□□ -0.34
ABCD4-227ENST00000557554 KSR2Q6VAB6 950 aa12.9□□□□□ -0.34
ABCD4-227ENST00000557554 FAM161BQ96MY7 647 aa12.9□□□□□ -0.34
ABCD4-227ENST00000557554 MBIPQ9NS73 344 aa12.9□□□□□ -0.34
ABCD4-227ENST00000557554 ZNF112Q9UJU3 913 aa12.9□□□□□ -0.34
ABCD4-227ENST00000557554 PI4KAP2A4QPH2 592 aa12.89□□□□□ -0.35
ABCD4-227ENST00000557554 NEURL1BA8MQ27 555 aa12.89□□□□□ -0.35
ABCD4-227ENST00000557554 ZNF853P0CG23 659 aa12.89□□□□□ -0.35
ABCD4-227ENST00000557554 CACNB3P54284 484 aa12.89□□□□□ -0.35
ABCD4-227ENST00000557554 GRIK5Q16478 980 aa12.89□□□□□ -0.35
ABCD4-227ENST00000557554 UBE3BQ7Z3V4 1068 aa12.89□□□□□ -0.35
ABCD4-227ENST00000557554 FAM83AQ86UY5 434 aa12.89□□□□□ -0.35
ABCD4-227ENST00000557554 PI4KAP1Q8N8J0 262 aa12.89□□□□□ -0.35
ABCD4-227ENST00000557554 CDX2Q99626 313 aaPredicted RBP12.89□□□□□ -0.35
ABCD4-227ENST00000557554 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.89□□□□□ -0.359e-6■■□□□ 13.2
ABCD4-227ENST00000557554 A0A1B0GUL6 1792 aa12.89□□□□□ -0.35
ABCD4-227ENST00000557554 ELL2O00472 640 aaPredicted RBP12.88□□□□□ -0.35
ABCD4-227ENST00000557554 DDX58O95786 925 aaKnown RBP12.88□□□□□ -0.35
ABCD4-227ENST00000557554 FKBP1CQ5VVH2 108 aa12.88□□□□□ -0.35
ABCD4-227ENST00000557554 PARK7Q99497 189 aaKnown RBP12.88□□□□□ -0.35
ABCD4-227ENST00000557554 C11orf49Q9H6J7 331 aa12.88□□□□□ -0.35
ABCD4-227ENST00000557554 CDH23Q9H251 3354 aa12.88□□□□□ -0.35
ABCD4-227ENST00000557554 PLA2G5P39877 138 aa12.87□□□□□ -0.35
ABCD4-227ENST00000557554 HDLBPQ00341 1268 aaKnown RBP12.87□□□□□ -0.35
ABCD4-227ENST00000557554 MIGA2Q7L4E1 593 aa12.87□□□□□ -0.35
ABCD4-227ENST00000557554 SYMPKQ92797 1274 aaKnown RBP12.87□□□□□ -0.35
ABCD4-227ENST00000557554 MRIQ9BWK5 157 aa12.87□□□□□ -0.35
ABCD4-227ENST00000557554 OGDHLQ9ULD0 1010 aa12.87□□□□□ -0.35
ABCD4-227ENST00000557554 DDX60LQ5H9U9 1706 aaKnown RBP12.87□□□□□ -0.35
ABCD4-227ENST00000557554 PFASO15067 1338 aa12.87□□□□□ -0.35
ABCD4-227ENST00000557554 CXCL11O14625 94 aa12.86□□□□□ -0.35
ABCD4-227ENST00000557554 APOBEC3HQ6NTF7 200 aaKnown RBP12.86□□□□□ -0.35
ABCD4-227ENST00000557554 C8orf58Q8NAV2 365 aa12.86□□□□□ -0.35
ABCD4-227ENST00000557554 MAFAQ8NHW3 353 aaPredicted RBP12.86□□□□□ -0.35
ABCD4-227ENST00000557554 HOOK2Q96ED9 719 aa12.86□□□□□ -0.35
ABCD4-227ENST00000557554 FAM84BQ96KN1 310 aaPredicted RBP12.86□□□□□ -0.35
ABCD4-227ENST00000557554 ZNF341Q9BYN7 854 aa12.86□□□□□ -0.35
ABCD4-227ENST00000557554 SEMA6BQ9H3T3 888 aa12.86□□□□□ -0.35
ABCD4-227ENST00000557554 TNPO2O14787 897 aaKnown RBP12.85□□□□□ -0.35
ABCD4-227ENST00000557554 COL6A1P12109 1028 aa12.85□□□□□ -0.35
ABCD4-227ENST00000557554 GCKRQ14397 625 aa12.85□□□□□ -0.35
ABCD4-227ENST00000557554 NOL9Q5SY16 702 aaKnown RBP12.85□□□□□ -0.35
ABCD4-227ENST00000557554 DCAF15Q66K64 600 aa12.85□□□□□ -0.35
ABCD4-227ENST00000557554 ZDHHC15Q96MV8 337 aa12.85□□□□□ -0.35
ABCD4-227ENST00000557554 GJD2Q9UKL4 321 aa12.85□□□□□ -0.35
ABCD4-227ENST00000557554 DNAH12Q6ZR08 3092 aa12.85□□□□□ -0.35
ABCD4-227ENST00000557554 ANKRD18BA2A2Z9 1011 aa12.84□□□□□ -0.35
ABCD4-227ENST00000557554 HOXD11P31277 338 aaPredicted RBP12.84□□□□□ -0.35
ABCD4-227ENST00000557554 FOXO4P98177 505 aa12.84□□□□□ -0.35
ABCD4-227ENST00000557554 MDM2Q00987 491 aaPredicted RBP12.84□□□□□ -0.35
ABCD4-227ENST00000557554 TRIM32Q13049 653 aa12.84□□□□□ -0.35
ABCD4-227ENST00000557554 SLC45A1Q9Y2W3 748 aa12.84□□□□□ -0.35
ABCD4-227ENST00000557554 RPAP1Q9BWH6 1393 aaPredicted RBP12.83□□□□□ -0.36
ABCD4-227ENST00000557554 A0A0G2JLL6 359 aaPredicted RBP12.83□□□□□ -0.36
ABCD4-227ENST00000557554 TNFRSF10AO00220 468 aa12.83□□□□□ -0.36
ABCD4-227ENST00000557554 HIBADHP31937 336 aaKnown RBP12.83□□□□□ -0.36
ABCD4-227ENST00000557554 GYG1P46976 350 aa12.83□□□□□ -0.36
ABCD4-227ENST00000557554 NEXNQ0ZGT2 675 aa12.83□□□□□ -0.36
ABCD4-227ENST00000557554 ZNF697Q5TEC3 545 aa12.83□□□□□ -0.36
ABCD4-227ENST00000557554 CCDC30Q5VVM6 783 aa12.83□□□□□ -0.36
ABCD4-227ENST00000557554 PRRT2Q7Z6L0 340 aaPredicted RBP12.83□□□□□ -0.36
ABCD4-227ENST00000557554 CCDC146Q8IYE0 955 aa12.83□□□□□ -0.36
ABCD4-227ENST00000557554 HMX1Q9NP08 348 aaPredicted RBP12.83□□□□□ -0.36
ABCD4-227ENST00000557554 HMGCRP04035 888 aa12.82□□□□□ -0.36
ABCD4-227ENST00000557554 IFIT5Q13325 482 aaKnown RBP12.82□□□□□ -0.36
ABCD4-227ENST00000557554 LRRC26Q2I0M4 334 aa12.82□□□□□ -0.36
ABCD4-227ENST00000557554 FASTKD5Q7L8L6 764 aaKnown RBP12.82□□□□□ -0.36
ABCD4-227ENST00000557554 COA7Q96BR5 231 aa12.82□□□□□ -0.36
ABCD4-227ENST00000557554 TTYH1Q9H313 450 aaPredicted RBP12.82□□□□□ -0.36
ABCD4-227ENST00000557554 AFG3L2Q9Y4W6 797 aa12.82□□□□□ -0.36
ABCD4-227ENST00000557554 PLIN1O60240 522 aa12.81□□□□□ -0.36
ABCD4-227ENST00000557554 MAP3K21Q5TCX8 1036 aa12.81□□□□□ -0.36
ABCD4-227ENST00000557554 FAM151AQ8WW52 585 aa12.81□□□□□ -0.36
ABCD4-227ENST00000557554 TEKT1Q969V4 418 aa12.81□□□□□ -0.36
ABCD4-227ENST00000557554 RUNDC1Q96C34 613 aa12.81□□□□□ -0.36
ABCD4-227ENST00000557554 PTPRFP10586 1907 aa12.8□□□□□ -0.36
ABCD4-227ENST00000557554 PHF20L1A8MW92 1017 aa12.8□□□□□ -0.36
ABCD4-227ENST00000557554 UBE4AQ14139 1066 aa12.8□□□□□ -0.36
ABCD4-227ENST00000557554 G2E3Q7L622 706 aa12.8□□□□□ -0.36
ABCD4-227ENST00000557554 FBXO33Q7Z6M2 555 aa12.8□□□□□ -0.36
ABCD4-227ENST00000557554 ANKRD13CQ8N6S4 541 aa12.8□□□□□ -0.36
ABCD4-227ENST00000557554 TSPYL6Q8N831 410 aa12.8□□□□□ -0.36
ABCD4-227ENST00000557554 MYLIPQ8WY64 445 aa12.8□□□□□ -0.36
ABCD4-227ENST00000557554 FAM122AQ96E09 287 aa12.8□□□□□ -0.36
ABCD4-227ENST00000557554 ZNF594Q96JF6 807 aaPredicted RBP12.8□□□□□ -0.36
ABCD4-227ENST00000557554 TAOK2Q9UL54 1235 aa12.8□□□□□ -0.36
ABCD4-227ENST00000557554 ZHX2Q9Y6X8 837 aa12.8□□□□□ -0.36
ABCD4-227ENST00000557554 PLXNB2O15031 1838 aa12.79□□□□□ -0.36
ABCD4-227ENST00000557554 TJAP1Q5JTD0 557 aa12.79□□□□□ -0.36
ABCD4-227ENST00000557554 LHX8Q68G74 356 aa12.79□□□□□ -0.36
ABCD4-227ENST00000557554 HHIPL2Q6UWX4 724 aa12.79□□□□□ -0.36
ABCD4-227ENST00000557554 LDHAL6AQ6ZMR3 332 aa12.79□□□□□ -0.36
ABCD4-227ENST00000557554 IFT57Q9NWB7 429 aa12.79□□□□□ -0.36
ABCD4-227ENST00000557554 NCOR1O75376 2440 aa12.79□□□□□ -0.36
ABCD4-227ENST00000557554 PTPRAP18433 802 aa12.78□□□□□ -0.36
ABCD4-227ENST00000557554 FAM110CQ1W6H9 321 aa12.78□□□□□ -0.36
ABCD4-227ENST00000557554 TRIB2Q92519 343 aa12.78□□□□□ -0.36
ABCD4-227ENST00000557554 CHMP4AQ9BY43 222 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms