RNA–Protein interactions for RNA: ENST00000557341.5

SNX6-210, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 559 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-210ENST00000557341 ZBTB22O15209 634 aa17.57■□□□□ 0.4
SNX6-210ENST00000557341 MAP3K9P80192 1104 aa17.57■□□□□ 0.4
SNX6-210ENST00000557341 DIXDC1Q155Q3 683 aa17.57■□□□□ 0.4
SNX6-210ENST00000557341 DCAF15Q66K64 600 aa17.57■□□□□ 0.4
SNX6-210ENST00000557341 CCDC102BQ68D86 513 aa17.57■□□□□ 0.4
SNX6-210ENST00000557341 ZGPATQ8N5A5 531 aaKnown RBP17.57■□□□□ 0.4
SNX6-210ENST00000557341 PDS5AQ29RF7 1337 aaKnown RBP17.56■□□□□ 0.4
SNX6-210ENST00000557341 GNAI2P04899 355 aa17.56■□□□□ 0.4
SNX6-210ENST00000557341 ADORA1P30542 326 aa17.56■□□□□ 0.4
SNX6-210ENST00000557341 SOX10P56693 466 aa17.56■□□□□ 0.4
SNX6-210ENST00000557341 HNRNPUQ00839 825 aaKnown RBP eCLIP17.56■□□□□ 0.4
SNX6-210ENST00000557341 FBXO46Q6PJ61 603 aaPredicted RBP17.56■□□□□ 0.4
SNX6-210ENST00000557341 CNKSR2Q8WXI2 1034 aa17.56■□□□□ 0.4
SNX6-210ENST00000557341 CLUAP1Q96AJ1 413 aa17.56■□□□□ 0.4
SNX6-210ENST00000557341 OTUD5Q96G74 571 aa17.56■□□□□ 0.4
SNX6-210ENST00000557341 WRNIP1Q96S55 665 aa17.56■□□□□ 0.4
SNX6-210ENST00000557341 TNNQ9UQP3 1299 aa17.56■□□□□ 0.4
SNX6-210ENST00000557341 AKAP2Q9Y2D5 859 aa17.56■□□□□ 0.4
SNX6-210ENST00000557341 PDE4DIPQ5VU43 2346 aa17.56■□□□□ 0.4
SNX6-210ENST00000557341 ZSWIM8A7E2V4 1837 aa17.56■□□□□ 0.4
SNX6-210ENST00000557341 FOCADQ5VW36 1801 aa17.56■□□□□ 0.4
SNX6-210ENST00000557341 A0A1B0GUL7 405 aa17.55■□□□□ 0.4
SNX6-210ENST00000557341 SPDYE5A6NIY4 337 aa17.55■□□□□ 0.4
SNX6-210ENST00000557341 GTF2A2P52657 109 aa17.55■□□□□ 0.4
SNX6-210ENST00000557341 CRHR2Q13324 411 aa17.55■□□□□ 0.4
SNX6-210ENST00000557341 FAM151AQ8WW52 585 aa17.55■□□□□ 0.4
SNX6-210ENST00000557341 PHIPQ8WWQ0 1821 aa17.55■□□□□ 0.4
SNX6-210ENST00000557341 TFCP2Q12800 502 aa17.54■□□□□ 0.4
SNX6-210ENST00000557341 RASGRF1Q13972 1273 aa17.54■□□□□ 0.4
SNX6-210ENST00000557341 MVPQ14764 893 aaKnown RBP17.54■□□□□ 0.4
SNX6-210ENST00000557341 ZKSCAN2Q63HK3 967 aa17.54■□□□□ 0.4
SNX6-210ENST00000557341 CDC42EP5Q6NZY7 148 aa17.54■□□□□ 0.4
SNX6-210ENST00000557341 DZIP1Q86YF9 867 aaKnown RBP17.54■□□□□ 0.4
SNX6-210ENST00000557341 MS4A4AQ96JQ5 239 aa17.54■□□□□ 0.4
SNX6-210ENST00000557341 PTPN18Q99952 460 aa17.54■□□□□ 0.4
SNX6-210ENST00000557341 ZNF341Q9BYN7 854 aa17.54■□□□□ 0.4
SNX6-210ENST00000557341 SNCAIPQ9Y6H5 919 aa17.54■□□□□ 0.4
SNX6-210ENST00000557341 MGAMO43451 1857 aa17.53■□□□□ 0.4
SNX6-210ENST00000557341 CCL15-CCL14A0A0B4J2E2 113 aa17.53■□□□□ 0.4
SNX6-210ENST00000557341 TIMM10P62072 90 aa17.53■□□□□ 0.4
SNX6-210ENST00000557341 TCP10Q12799 353 aa17.53■□□□□ 0.4
SNX6-210ENST00000557341 CCL15Q16663 113 aa17.53■□□□□ 0.4
SNX6-210ENST00000557341 DIEXFQ68CQ4 756 aaKnown RBP17.53■□□□□ 0.4
SNX6-210ENST00000557341 ERO1BQ86YB8 467 aa17.53■□□□□ 0.4
SNX6-210ENST00000557341 MIER1Q8N108 512 aa17.53■□□□□ 0.4
SNX6-210ENST00000557341 BRI3BPQ8WY22 251 aa17.53■□□□□ 0.4
SNX6-210ENST00000557341 XAGE2Q96GT9 111 aa17.53■□□□□ 0.4
SNX6-210ENST00000557341 ERO1AQ96HE7 468 aa17.53■□□□□ 0.4
SNX6-210ENST00000557341 RFX7Q2KHR2 1363 aa17.53■□□□□ 0.4
SNX6-210ENST00000557341 GAKO14976 1311 aa17.52■□□□□ 0.4
SNX6-210ENST00000557341 NFIAQ12857 509 aa17.52■□□□□ 0.4
SNX6-210ENST00000557341 TMEM57Q8N5G2 664 aa17.52■□□□□ 0.4
SNX6-210ENST00000557341 ZKSCAN4Q969J2 545 aaPredicted RBP17.52■□□□□ 0.4
SNX6-210ENST00000557341 ABCF2Q9UG63 623 aa17.52■□□□□ 0.4
SNX6-210ENST00000557341 TRIM17Q9Y577 477 aa17.52■□□□□ 0.4
SNX6-210ENST00000557341 PNMA6EA0A0J9YXQ4 647 aa17.51■□□□□ 0.39
SNX6-210ENST00000557341 PPIL2Q13356 520 aa17.51■□□□□ 0.39
SNX6-210ENST00000557341 TAF1CQ15572 869 aaPredicted RBP17.51■□□□□ 0.39
SNX6-210ENST00000557341 SPTY2D1Q68D10 685 aaPredicted RBP17.51■□□□□ 0.39
SNX6-210ENST00000557341 SLF2Q8IX21 1173 aa17.51■□□□□ 0.39
SNX6-210ENST00000557341 USP40Q9NVE5 1235 aa17.51■□□□□ 0.39
SNX6-210ENST00000557341 CETPP11597 493 aa17.5■□□□□ 0.39
SNX6-210ENST00000557341 MIGA2Q7L4E1 593 aa17.5■□□□□ 0.39
SNX6-210ENST00000557341 OTOP1Q7RTM1 612 aa17.5■□□□□ 0.39
SNX6-210ENST00000557341 FTSJ3Q8IY81 847 aaKnown RBP17.5■□□□□ 0.39
SNX6-210ENST00000557341 CD99L2Q8TCZ2 262 aa17.5■□□□□ 0.39
SNX6-210ENST00000557341 NEUROD6Q96NK8 337 aa17.5■□□□□ 0.39
SNX6-210ENST00000557341 FAM198AQ9UFP1 575 aa17.5■□□□□ 0.39
SNX6-210ENST00000557341 BRCA2P51587 3418 aa17.5■□□□□ 0.39
SNX6-210ENST00000557341 IRF6O14896 467 aa17.49■□□□□ 0.39
SNX6-210ENST00000557341 WDHD1O75717 1129 aaPredicted RBP17.49■□□□□ 0.39
SNX6-210ENST00000557341 INPP5BP32019 993 aa17.49■□□□□ 0.39
SNX6-210ENST00000557341 SP3Q02447 781 aa17.49■□□□□ 0.39
SNX6-210ENST00000557341 G3BP1Q13283 466 aaKnown RBP eCLIP17.49■□□□□ 0.39
SNX6-210ENST00000557341 SNAPC2Q13487 334 aa17.49■□□□□ 0.39
SNX6-210ENST00000557341 GORABQ5T7V8 394 aa17.49■□□□□ 0.39
SNX6-210ENST00000557341 FAM43AQ8N2R8 423 aa17.49■□□□□ 0.39
SNX6-210ENST00000557341 ZFYVE28Q9HCC9 887 aa17.49■□□□□ 0.39
SNX6-210ENST00000557341 ZCCHC17Q9NP64 241 aaKnown RBP17.49■□□□□ 0.39
SNX6-210ENST00000557341 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.49■□□□□ 0.39
SNX6-210ENST00000557341 MROH7-TTC4A0A0A0MT08 1334 aa17.48■□□□□ 0.39
SNX6-210ENST00000557341 ZBED9Q6R2W3 1325 aa17.48■□□□□ 0.39
SNX6-210ENST00000557341 RGS3P49796 1198 aa17.48■□□□□ 0.39
SNX6-210ENST00000557341 PPATQ06203 517 aa17.48■□□□□ 0.39
SNX6-210ENST00000557341 ERICH6Q7L0X2 663 aa17.48■□□□□ 0.39
SNX6-210ENST00000557341 IDI2Q9BXS1 227 aa17.48■□□□□ 0.39
SNX6-210ENST00000557341 ATRNL1Q5VV63 1379 aa17.48■□□□□ 0.39
SNX6-210ENST00000557341 SIPA1L1O43166 1804 aa17.47■□□□□ 0.39
SNX6-210ENST00000557341 ENTPD3O75355 529 aa17.47■□□□□ 0.39
SNX6-210ENST00000557341 ARID4AP29374 1257 aaPredicted RBP17.47■□□□□ 0.39
SNX6-210ENST00000557341 BTDP43251 543 aa17.47■□□□□ 0.39
SNX6-210ENST00000557341 FAM163AQ96GL9 167 aaPredicted RBP17.47■□□□□ 0.39
SNX6-210ENST00000557341 EFCC1Q9HA90 598 aa17.47■□□□□ 0.39
SNX6-210ENST00000557341 HMG20BQ9P0W2 317 aa17.47■□□□□ 0.39
SNX6-210ENST00000557341 ZNF112Q9UJU3 913 aa17.47■□□□□ 0.39
SNX6-210ENST00000557341 LOC285556D6RIA3 1793 aa17.47■□□□□ 0.39
SNX6-210ENST00000557341 MECOMQ03112 1051 aa17.46■□□□□ 0.39
SNX6-210ENST00000557341 NOL9Q5SY16 702 aaKnown RBP17.46■□□□□ 0.39
SNX6-210ENST00000557341 ITPRIPQ8IWB1 547 aa17.46■□□□□ 0.39
SNX6-210ENST00000557341 ZSCAN29Q8IWY8 852 aaPredicted RBP17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 273.2 ms