RNA–Protein interactions for RNA: ENST00000556765.1

TRAPPC6B-206, Transcript of trafficking protein particle complex 6B, humanhuman

TSL 3

Gene TRAPPC6B, Length 664 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6B-206ENST00000556765 CASP7P55210 303 aa17.35■□□□□ 0.37
TRAPPC6B-206ENST00000556765 LACTBP83111 547 aaPredicted RBP17.35■□□□□ 0.37
TRAPPC6B-206ENST00000556765 OS9Q13438 667 aaPredicted RBP17.35■□□□□ 0.37
TRAPPC6B-206ENST00000556765 Q7L0L9 218 aa17.35■□□□□ 0.37
TRAPPC6B-206ENST00000556765 UBE3BQ7Z3V4 1068 aa17.35■□□□□ 0.37
TRAPPC6B-206ENST00000556765 ANKRD18AQ8IVF6 992 aa17.35■□□□□ 0.37
TRAPPC6B-206ENST00000556765 ELP3Q9H9T3 547 aa17.35■□□□□ 0.37
TRAPPC6B-206ENST00000556765 SALL3Q9BXA9 1300 aa17.35■□□□□ 0.37
TRAPPC6B-206ENST00000556765 ZNF804BA4D1E1 1349 aa17.34■□□□□ 0.37
TRAPPC6B-206ENST00000556765 CDC45O75419 566 aa17.34■□□□□ 0.37
TRAPPC6B-206ENST00000556765 GNRH1P01148 92 aa17.34■□□□□ 0.37
TRAPPC6B-206ENST00000556765 PCCAP05165 728 aaPredicted RBP17.34■□□□□ 0.37
TRAPPC6B-206ENST00000556765 GJB1P08034 283 aa17.34■□□□□ 0.37
TRAPPC6B-206ENST00000556765 MX1P20591 662 aa17.34■□□□□ 0.37
TRAPPC6B-206ENST00000556765 PDE1AP54750 535 aa17.34■□□□□ 0.37
TRAPPC6B-206ENST00000556765 PRMT2P55345 433 aa17.34■□□□□ 0.37
TRAPPC6B-206ENST00000556765 G3BP1Q13283 466 aaKnown RBP eCLIP17.34■□□□□ 0.37
TRAPPC6B-206ENST00000556765 DLGAP5Q15398 846 aa17.34■□□□□ 0.37
TRAPPC6B-206ENST00000556765 NBPF12Q5TAG4 269 aaPredicted RBP17.34■□□□□ 0.37
TRAPPC6B-206ENST00000556765 CLASRPQ8N2M8 674 aaKnown RBP17.34■□□□□ 0.37
TRAPPC6B-206ENST00000556765 KAZALD1Q96I82 304 aa17.34■□□□□ 0.37
TRAPPC6B-206ENST00000556765 CCDC85AQ96PX6 553 aaPredicted RBP17.34■□□□□ 0.37
TRAPPC6B-206ENST00000556765 PLA2G12BQ9BX93 195 aa17.34■□□□□ 0.37
TRAPPC6B-206ENST00000556765 COA1Q9GZY4 146 aa17.34■□□□□ 0.37
TRAPPC6B-206ENST00000556765 COPRSQ9NQ92 184 aa17.34■□□□□ 0.37
TRAPPC6B-206ENST00000556765 AK9Q5TCS8 1911 aa17.33■□□□□ 0.37
TRAPPC6B-206ENST00000556765 TTC41PQ6P2S7 1318 aa17.33■□□□□ 0.36
TRAPPC6B-206ENST00000556765 CCL15-CCL14A0A0B4J2E2 113 aa17.33■□□□□ 0.36
TRAPPC6B-206ENST00000556765 EVI5O60447 810 aa17.33■□□□□ 0.36
TRAPPC6B-206ENST00000556765 CCL15Q16663 113 aa17.33■□□□□ 0.36
TRAPPC6B-206ENST00000556765 TTLL5Q6EMB2 1281 aa17.33■□□□□ 0.36
TRAPPC6B-206ENST00000556765 FAM43AQ8N2R8 423 aa17.33■□□□□ 0.36
TRAPPC6B-206ENST00000556765 ZBTB38Q8NAP3 1195 aaPredicted RBP17.33■□□□□ 0.36
TRAPPC6B-206ENST00000556765 GPATCH3Q96I76 525 aa17.33■□□□□ 0.36
TRAPPC6B-206ENST00000556765 FBXO3Q9UK99 471 aa17.33■□□□□ 0.36
TRAPPC6B-206ENST00000556765 OTOFQ9HC10 1997 aa17.32■□□□□ 0.36
TRAPPC6B-206ENST00000556765 WDHD1O75717 1129 aaPredicted RBP17.32■□□□□ 0.36
TRAPPC6B-206ENST00000556765 FARP2O94887 1054 aaPredicted RBP17.32■□□□□ 0.36
TRAPPC6B-206ENST00000556765 CCL5P13501 91 aa17.32■□□□□ 0.36
TRAPPC6B-206ENST00000556765 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.32■□□□□ 0.36
TRAPPC6B-206ENST00000556765 CLRN2A0PK11 232 aa17.31■□□□□ 0.36
TRAPPC6B-206ENST00000556765 ERC2O15083 957 aa17.31■□□□□ 0.36
TRAPPC6B-206ENST00000556765 TLR2O60603 784 aa17.31■□□□□ 0.36
TRAPPC6B-206ENST00000556765 GTF2A2P52657 109 aa17.31■□□□□ 0.36
TRAPPC6B-206ENST00000556765 MTMR14Q8NCE2 650 aa17.31■□□□□ 0.36
TRAPPC6B-206ENST00000556765 CNKSR2Q8WXI2 1034 aa17.31■□□□□ 0.36
TRAPPC6B-206ENST00000556765 MTMR10Q9NXD2 777 aa17.31■□□□□ 0.36
TRAPPC6B-206ENST00000556765 APBB1O00213 710 aa17.3■□□□□ 0.36
TRAPPC6B-206ENST00000556765 SMARCA5O60264 1052 aaPredicted RBP17.3■□□□□ 0.36
TRAPPC6B-206ENST00000556765 GRK4P32298 578 aa17.3■□□□□ 0.36
TRAPPC6B-206ENST00000556765 TXNRD3Q86VQ6 643 aa17.3■□□□□ 0.36
TRAPPC6B-206ENST00000556765 IPO9Q96P70 1041 aaKnown RBP17.3■□□□□ 0.36
TRAPPC6B-206ENST00000556765 RNF208Q9H0X6 261 aa17.3■□□□□ 0.36
TRAPPC6B-206ENST00000556765 VEZTQ9HBM0 779 aa17.3■□□□□ 0.36
TRAPPC6B-206ENST00000556765 TTC28Q96AY4 2481 aa17.29■□□□□ 0.36
TRAPPC6B-206ENST00000556765 MYO1BO43795 1136 aa17.29■□□□□ 0.36
TRAPPC6B-206ENST00000556765 PDE8AO60658 829 aa17.29■□□□□ 0.36
TRAPPC6B-206ENST00000556765 ECM2O94769 699 aaPredicted RBP17.29■□□□□ 0.36
TRAPPC6B-206ENST00000556765 GTF2IP78347 998 aa17.29■□□□□ 0.36
TRAPPC6B-206ENST00000556765 SRRDQ9UH36 339 aa17.29■□□□□ 0.36
TRAPPC6B-206ENST00000556765 MINPP1Q9UNW1 487 aa17.29■□□□□ 0.36
TRAPPC6B-206ENST00000556765 RIPOR2Q9Y4F9 1068 aa17.29■□□□□ 0.36
TRAPPC6B-206ENST00000556765 PCDHAC2Q9Y5I4 1007 aa17.29■□□□□ 0.36
TRAPPC6B-206ENST00000556765 ECM29Q5VYK3 1845 aa17.28■□□□□ 0.36
TRAPPC6B-206ENST00000556765 EYSQ5T1H1 3165 aa17.28■□□□□ 0.36
TRAPPC6B-206ENST00000556765 GSPT1P15170 499 aaKnown RBP17.28■□□□□ 0.36
TRAPPC6B-206ENST00000556765 RAET1EQ8TD07 263 aa17.28■□□□□ 0.36
TRAPPC6B-206ENST00000556765 U2AF1L4Q8WU68 220 aaKnown RBP17.28■□□□□ 0.36
TRAPPC6B-206ENST00000556765 CDC5LQ99459 802 aaKnown RBP17.28■□□□□ 0.36
TRAPPC6B-206ENST00000556765 SPDYE2BA6NHP3 402 aa17.27■□□□□ 0.36
TRAPPC6B-206ENST00000556765 GLRX3O76003 335 aaKnown RBP17.27■□□□□ 0.36
TRAPPC6B-206ENST00000556765 SPDYE6P0CI01 402 aa17.27■□□□□ 0.36
TRAPPC6B-206ENST00000556765 BMP8BP34820 402 aa17.27■□□□□ 0.36
TRAPPC6B-206ENST00000556765 RFX5P48382 616 aaPredicted RBP17.27■□□□□ 0.36
TRAPPC6B-206ENST00000556765 FOXO4P98177 505 aa17.27■□□□□ 0.36
TRAPPC6B-206ENST00000556765 RASA3Q14644 834 aa17.27■□□□□ 0.36
TRAPPC6B-206ENST00000556765 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.27■□□□□ 0.36
TRAPPC6B-206ENST00000556765 TBC1D32Q96NH3 1257 aa17.27■□□□□ 0.36
TRAPPC6B-206ENST00000556765 GDF15Q99988 308 aa17.27■□□□□ 0.36
TRAPPC6B-206ENST00000556765 PRDM6Q9NQX0 595 aa17.27■□□□□ 0.36
TRAPPC6B-206ENST00000556765 BSDC1Q9NW68 430 aaPredicted RBP17.27■□□□□ 0.36
TRAPPC6B-206ENST00000556765 BIN2Q9UBW5 565 aaPredicted RBP17.27■□□□□ 0.36
TRAPPC6B-206ENST00000556765 CIAO1O76071 339 aa17.26■□□□□ 0.35
TRAPPC6B-206ENST00000556765 IFIT2P09913 472 aaKnown RBP17.26■□□□□ 0.35
TRAPPC6B-206ENST00000556765 CTGFP29279 349 aa17.26■□□□□ 0.35
TRAPPC6B-206ENST00000556765 UBXN2AP68543 259 aa17.26■□□□□ 0.35
TRAPPC6B-206ENST00000556765 VGLL4Q14135 290 aa17.26■□□□□ 0.35
TRAPPC6B-206ENST00000556765 CFAP100Q494V2 611 aa17.26■□□□□ 0.35
TRAPPC6B-206ENST00000556765 LMBR1LQ6UX01 489 aa17.26■□□□□ 0.35
TRAPPC6B-206ENST00000556765 TRIM47Q96LD4 638 aa17.26■□□□□ 0.35
TRAPPC6B-206ENST00000556765 ZCCHC17Q9NP64 241 aaKnown RBP17.26■□□□□ 0.35
TRAPPC6B-206ENST00000556765 GPR108Q9NPR9 543 aa17.26■□□□□ 0.35
TRAPPC6B-206ENST00000556765 LAMA2P24043 3122 aaKnown RBP17.26■□□□□ 0.35
TRAPPC6B-206ENST00000556765 EPB41L2O43491 1005 aaKnown RBP17.25■□□□□ 0.35
TRAPPC6B-206ENST00000556765 OSBPP22059 807 aa17.25■□□□□ 0.35
TRAPPC6B-206ENST00000556765 KLRK1P26718 216 aa17.25■□□□□ 0.35
TRAPPC6B-206ENST00000556765 HOXD10P28358 340 aa17.25■□□□□ 0.35
TRAPPC6B-206ENST00000556765 PSMC4P43686 418 aa17.25■□□□□ 0.35
TRAPPC6B-206ENST00000556765 LRIT3Q3SXY7 679 aa17.25■□□□□ 0.35
TRAPPC6B-206ENST00000556765 EPHA10Q5JZY3 1008 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms