RNA–Protein interactions for RNA: ENST00000556399.5

ARHGEF40-207, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 4,902 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-207ENST00000556399 SEPT11Q9NVA2 429 aaKnown RBP17.06■□□□□ 0.32
ARHGEF40-207ENST00000556399 IQSEC3Q9UPP2 1182 aaPredicted RBP17.06■□□□□ 0.32
ARHGEF40-207ENST00000556399 TMEM2Q9UHN6 1383 aa17.06■□□□□ 0.32
ARHGEF40-207ENST00000556399 MICALCLQ6ZW33 695 aa17.06■□□□□ 0.32
ARHGEF40-207ENST00000556399 DIS3L2Q8IYB7 885 aaKnown RBP17.06■□□□□ 0.32
ARHGEF40-207ENST00000556399 RASSF4Q9H2L5 321 aa17.06■□□□□ 0.32
ARHGEF40-207ENST00000556399 HSPD1P10809 573 aaKnown RBP17.06■□□□□ 0.32
ARHGEF40-207ENST00000556399 HLTFQ14527 1009 aaKnown RBP eCLIP17.06■□□□□ 0.32
ARHGEF40-207ENST00000556399 HELBQ8NG08 1087 aaPredicted RBP17.06■□□□□ 0.32
ARHGEF40-207ENST00000556399 ZNF496Q96IT1 587 aaPredicted RBP17.06■□□□□ 0.32
ARHGEF40-207ENST00000556399 EXOC1Q9NV70 894 aa17.06■□□□□ 0.32
ARHGEF40-207ENST00000556399 PSDA5PKW4 1024 aaPredicted RBP17.06■□□□□ 0.32
ARHGEF40-207ENST00000556399 DZIP1Q86YF9 867 aaKnown RBP17.06■□□□□ 0.32
ARHGEF40-207ENST00000556399 ZNF444Q8N0Y2 327 aaPredicted RBP17.06■□□□□ 0.32
ARHGEF40-207ENST00000556399 PPP1R13BQ96KQ4 1090 aa17.06■□□□□ 0.32
ARHGEF40-207ENST00000556399 KAT14Q9H8E8 782 aa17.06■□□□□ 0.32
ARHGEF40-207ENST00000556399 DBNLQ9UJU6 430 aaKnown RBP17.06■□□□□ 0.32
ARHGEF40-207ENST00000556399 HSF2BPO75031 334 aa17.05■□□□□ 0.32
ARHGEF40-207ENST00000556399 PDIA3P30101 505 aaKnown RBP17.05■□□□□ 0.32
ARHGEF40-207ENST00000556399 TAX1BP1Q86VP1 789 aa17.05■□□□□ 0.32
ARHGEF40-207ENST00000556399 TRMT44Q8IYL2 757 aaKnown RBP17.05■□□□□ 0.32
ARHGEF40-207ENST00000556399 NSUN7Q8NE18 718 aaKnown RBP17.05■□□□□ 0.32
ARHGEF40-207ENST00000556399 CALML4Q96GE6 196 aa17.05■□□□□ 0.32
ARHGEF40-207ENST00000556399 MYL10Q9BUA6 226 aa17.05■□□□□ 0.32
ARHGEF40-207ENST00000556399 CLIC4Q9Y696 253 aa17.05■□□□□ 0.32
ARHGEF40-207ENST00000556399 CEP152O94986 1710 aa17.05■□□□□ 0.32
ARHGEF40-207ENST00000556399 USP6P35125 1406 aa17.05■□□□□ 0.32
ARHGEF40-207ENST00000556399 POSTNQ15063 836 aa17.05■□□□□ 0.32
ARHGEF40-207ENST00000556399 ZFYVE27Q5T4F4 411 aa17.05■□□□□ 0.32
ARHGEF40-207ENST00000556399 ADKP55263 362 aaKnown RBP17.05■□□□□ 0.32
ARHGEF40-207ENST00000556399 TMEM266Q2M3C6 531 aa17.05■□□□□ 0.32
ARHGEF40-207ENST00000556399 SPECC1LQ69YQ0 1117 aa17.05■□□□□ 0.32
ARHGEF40-207ENST00000556399 NAPGQ99747 312 aaPredicted RBP17.05■□□□□ 0.32
ARHGEF40-207ENST00000556399 RAB34Q9BZG1 259 aa17.05■□□□□ 0.32
ARHGEF40-207ENST00000556399 RBM6P78332 1123 aaKnown RBP17.04■□□□□ 0.32
ARHGEF40-207ENST00000556399 RESTQ13127 1097 aa17.04■□□□□ 0.32
ARHGEF40-207ENST00000556399 IQUBQ8NA54 791 aa17.04■□□□□ 0.32
ARHGEF40-207ENST00000556399 RCOR1Q9UKL0 485 aa17.04■□□□□ 0.32
ARHGEF40-207ENST00000556399 LUC7L2Q9Y383 392 aaKnown RBP17.04■□□□□ 0.32
ARHGEF40-207ENST00000556399 REREQ9P2R6 1566 aa17.04■□□□□ 0.32
ARHGEF40-207ENST00000556399 CMA1P23946 247 aa17.04■□□□□ 0.32
ARHGEF40-207ENST00000556399 PDE4BQ07343 736 aa17.04■□□□□ 0.32
ARHGEF40-207ENST00000556399 NCBP1Q09161 790 aaKnown RBP17.04■□□□□ 0.32
ARHGEF40-207ENST00000556399 MIGA1Q8NAN2 632 aa17.04■□□□□ 0.32
ARHGEF40-207ENST00000556399 ZNF287Q9HBT7 754 aa17.04■□□□□ 0.32
ARHGEF40-207ENST00000556399 BCCIPQ9P287 314 aaKnown RBP eCLIP17.04■□□□□ 0.32
ARHGEF40-207ENST00000556399 MBD4O95243 580 aa17.04■□□□□ 0.32
ARHGEF40-207ENST00000556399 KIF5AQ12840 1032 aa17.04■□□□□ 0.32
ARHGEF40-207ENST00000556399 GPR161Q8N6U8 529 aaKnown RBP17.04■□□□□ 0.32
ARHGEF40-207ENST00000556399 TTF2Q9UNY4 1162 aaKnown RBP17.04■□□□□ 0.32
ARHGEF40-207ENST00000556399 SMC1AQ14683 1233 aaKnown RBP17.04■□□□□ 0.32
ARHGEF40-207ENST00000556399 SLC4A8Q2Y0W8 1093 aa17.04■□□□□ 0.32
ARHGEF40-207ENST00000556399 DPCR1Q3MIW9 517 aa17.04■□□□□ 0.32
ARHGEF40-207ENST00000556399 FAM89AQ96GI7 184 aa17.04■□□□□ 0.32
ARHGEF40-207ENST00000556399 CTNND2Q9UQB3 1225 aa17.04■□□□□ 0.32
ARHGEF40-207ENST00000556399 A0A1W2PQ27 194 aa17.03■□□□□ 0.32
ARHGEF40-207ENST00000556399 A0A1W2PQ64 194 aa17.03■□□□□ 0.32
ARHGEF40-207ENST00000556399 A0A1W2PQD8 194 aa17.03■□□□□ 0.32
ARHGEF40-207ENST00000556399 MYO1BO43795 1136 aa17.03■□□□□ 0.32
ARHGEF40-207ENST00000556399 GNAT2P19087 354 aa17.03■□□□□ 0.32
ARHGEF40-207ENST00000556399 VPS16Q9H269 839 aa17.03■□□□□ 0.32
ARHGEF40-207ENST00000556399 RTEL1Q9NZ71 1219 aa17.03■□□□□ 0.32
ARHGEF40-207ENST00000556399 RTL9Q8NET4 1388 aa17.03■□□□□ 0.32
ARHGEF40-207ENST00000556399 VWA3AA6NCI4 1184 aa17.03■□□□□ 0.32
ARHGEF40-207ENST00000556399 TACC1O75410 805 aa17.03■□□□□ 0.32
ARHGEF40-207ENST00000556399 CCDC40Q4G0X9 1142 aa17.03■□□□□ 0.32
ARHGEF40-207ENST00000556399 MAATS1Q7Z4T9 603 aa17.03■□□□□ 0.32
ARHGEF40-207ENST00000556399 SYNRGQ9UMZ2 1314 aa17.03■□□□□ 0.32
ARHGEF40-207ENST00000556399 ZNF652Q9Y2D9 606 aa17.03■□□□□ 0.32
ARHGEF40-207ENST00000556399 ARAP3Q8WWN8 1544 aa17.03■□□□□ 0.32
ARHGEF40-207ENST00000556399 DHX37Q8IY37 1157 aaKnown RBP17.03■□□□□ 0.32
ARHGEF40-207ENST00000556399 PPP2R2CQ9Y2T4 447 aa17.03■□□□□ 0.32
ARHGEF40-207ENST00000556399 DEXIO95424 95 aa17.03■□□□□ 0.32
ARHGEF40-207ENST00000556399 CABLES1Q8TDN4 633 aa17.03■□□□□ 0.32
ARHGEF40-207ENST00000556399 EFCAB8A8MWE9 144 aa17.02■□□□□ 0.32
ARHGEF40-207ENST00000556399 MCM7P33993 719 aa17.02■□□□□ 0.32
ARHGEF40-207ENST00000556399 ZAP70P43403 619 aa17.02■□□□□ 0.32
ARHGEF40-207ENST00000556399 TUBB2AQ13885 445 aa17.02■□□□□ 0.32
ARHGEF40-207ENST00000556399 CCDC122Q5T0U0 273 aa17.02■□□□□ 0.32
ARHGEF40-207ENST00000556399 TUBB2BQ9BVA1 445 aa17.02■□□□□ 0.32
ARHGEF40-207ENST00000556399 COPRSQ9NQ92 184 aa17.02■□□□□ 0.32
ARHGEF40-207ENST00000556399 IBSPP21815 317 aaPredicted RBP17.02■□□□□ 0.32
ARHGEF40-207ENST00000556399 ARID5BQ14865 1188 aa17.02■□□□□ 0.32
ARHGEF40-207ENST00000556399 ZNF174Q15697 407 aa17.02■□□□□ 0.32
ARHGEF40-207ENST00000556399 HECW2Q9P2P5 1572 aa17.02■□□□□ 0.32
ARHGEF40-207ENST00000556399 CHD1O14646 1710 aa17.02■□□□□ 0.32
ARHGEF40-207ENST00000556399 LTKP29376 864 aa17.02■□□□□ 0.32
ARHGEF40-207ENST00000556399 GTF2A1P52655 376 aaPredicted RBP17.02■□□□□ 0.32
ARHGEF40-207ENST00000556399 FANCLQ9NW38 375 aa17.02■□□□□ 0.32
ARHGEF40-207ENST00000556399 GOLGA6L7A0A1B0GV03 622 aa17.02■□□□□ 0.31
ARHGEF40-207ENST00000556399 GIMAP7Q8NHV1 300 aa17.02■□□□□ 0.31
ARHGEF40-207ENST00000556399 CCDC42Q96M95 316 aa17.02■□□□□ 0.31
ARHGEF40-207ENST00000556399 IFFO1Q0D2I5 559 aa17.01■□□□□ 0.31
ARHGEF40-207ENST00000556399 CDC5LQ99459 802 aaKnown RBP17.01■□□□□ 0.31
ARHGEF40-207ENST00000556399 DESI2Q9BSY9 194 aa17.01■□□□□ 0.31
ARHGEF40-207ENST00000556399 SASH1O94885 1247 aa17.01■□□□□ 0.31
ARHGEF40-207ENST00000556399 FBXO18Q8NFZ0 1043 aa17.01■□□□□ 0.31
ARHGEF40-207ENST00000556399 RPAP1Q9BWH6 1393 aaPredicted RBP17.01■□□□□ 0.31
ARHGEF40-207ENST00000556399 IRS4O14654 1257 aaPredicted RBP17.01■□□□□ 0.31
ARHGEF40-207ENST00000556399 MNAT1P51948 309 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 109.8 ms