RNA–Protein interactions for RNA: ENST00000554486.1

SCFD1-212, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 819 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-212ENST00000554486 RASSF7Q02833 373 aa8.53□□□□□ -1.04
SCFD1-212ENST00000554486 NME9Q86XW9 330 aa8.53□□□□□ -1.04
SCFD1-212ENST00000554486 BRD7Q9NPI1 651 aa8.53□□□□□ -1.04
SCFD1-212ENST00000554486 BIN2Q9UBW5 565 aaPredicted RBP8.53□□□□□ -1.04
SCFD1-212ENST00000554486 MARF1Q9Y4F3 1742 aaKnown RBP8.53□□□□□ -1.04
SCFD1-212ENST00000554486 NEURL1BA8MQ27 555 aa8.52□□□□□ -1.05
SCFD1-212ENST00000554486 GDF11O95390 407 aa8.52□□□□□ -1.05
SCFD1-212ENST00000554486 IRS1P35568 1242 aa8.52□□□□□ -1.05
SCFD1-212ENST00000554486 ARSDP51689 593 aa8.52□□□□□ -1.05
SCFD1-212ENST00000554486 CNGB1Q14028 1251 aaPredicted RBP8.52□□□□□ -1.05
SCFD1-212ENST00000554486 TRIP4Q15650 581 aaPredicted RBP8.52□□□□□ -1.05
SCFD1-212ENST00000554486 CC2D1BQ5T0F9 858 aaKnown RBP8.52□□□□□ -1.05
SCFD1-212ENST00000554486 GPR152Q8TDT2 470 aa8.52□□□□□ -1.05
SCFD1-212ENST00000554486 GGNBP2Q9H3C7 697 aa8.52□□□□□ -1.05
SCFD1-212ENST00000554486 POLIQ9UNA4 740 aa8.52□□□□□ -1.05
SCFD1-212ENST00000554486 RTCBQ9Y3I0 505 aaKnown RBP8.52□□□□□ -1.05
SCFD1-212ENST00000554486 USP54Q70EL1 1684 aa8.52□□□□□ -1.05
SCFD1-212ENST00000554486 NSD2O96028 1365 aa8.51□□□□□ -1.05
SCFD1-212ENST00000554486 USP31Q70CQ4 1352 aa8.51□□□□□ -1.05
SCFD1-212ENST00000554486 PARD3Q8TEW0 1356 aa8.51□□□□□ -1.05
SCFD1-212ENST00000554486 PIK3R2O00459 728 aa8.51□□□□□ -1.05
SCFD1-212ENST00000554486 PDGFAP04085 211 aa8.51□□□□□ -1.05
SCFD1-212ENST00000554486 ZNF468Q5VIY5 522 aaPredicted RBP8.51□□□□□ -1.05
SCFD1-212ENST00000554486 ALKBH2Q6NS38 261 aa8.51□□□□□ -1.05
SCFD1-212ENST00000554486 DNAJC14Q6Y2X3 702 aaPredicted RBP8.51□□□□□ -1.05
SCFD1-212ENST00000554486 RGL4Q8IZJ4 473 aa8.51□□□□□ -1.05
SCFD1-212ENST00000554486 EDEM1Q92611 657 aa8.51□□□□□ -1.05
SCFD1-212ENST00000554486 PRKRIP1Q9H875 184 aaPredicted RBP8.51□□□□□ -1.05
SCFD1-212ENST00000554486 RRAGCQ9HB90 399 aa8.51□□□□□ -1.05
SCFD1-212ENST00000554486 OVOS2A0A0J9YW53 1432 aa8.51□□□□□ -1.05
SCFD1-212ENST00000554486 TNS3Q68CZ2 1445 aa8.51□□□□□ -1.05
SCFD1-212ENST00000554486 OVOS2Q6IE36 1432 aa8.51□□□□□ -1.05
SCFD1-212ENST00000554486 PHLPP1O60346 1717 aa8.51□□□□□ -1.05
SCFD1-212ENST00000554486 SPATA31A3Q5VYP0 1347 aa8.51□□□□□ -1.05
SCFD1-212ENST00000554486 COL16A1Q07092 1604 aaPredicted RBP8.51□□□□□ -1.05
SCFD1-212ENST00000554486 EPXP11678 715 aa8.5□□□□□ -1.05
SCFD1-212ENST00000554486 MZF1P28698 734 aaPredicted RBP8.5□□□□□ -1.05
SCFD1-212ENST00000554486 DNM1Q05193 864 aaKnown RBP8.5□□□□□ -1.05
SCFD1-212ENST00000554486 NUTM2GQ5VZR2 741 aa8.5□□□□□ -1.05
SCFD1-212ENST00000554486 C1orf229Q6ZS94 237 aaPredicted RBP8.5□□□□□ -1.05
SCFD1-212ENST00000554486 MKL2Q9ULH7 1088 aa8.5□□□□□ -1.05
SCFD1-212ENST00000554486 CNTNAP5Q8WYK1 1306 aa8.5□□□□□ -1.05
SCFD1-212ENST00000554486 SHISA8B8ZZ34 492 aa8.49□□□□□ -1.05
SCFD1-212ENST00000554486 ANP32CO43423 234 aa8.49□□□□□ -1.05
SCFD1-212ENST00000554486 TMCO4Q5TGY1 634 aa8.49□□□□□ -1.05
SCFD1-212ENST00000554486 MORC1Q86VD1 984 aa8.49□□□□□ -1.05
SCFD1-212ENST00000554486 GJD3Q8N144 294 aa8.49□□□□□ -1.05
SCFD1-212ENST00000554486 BTBD6Q96KE9 485 aa8.49□□□□□ -1.05
SCFD1-212ENST00000554486 PODXL2Q9NZ53 605 aa8.49□□□□□ -1.05
SCFD1-212ENST00000554486 KCNH4Q9UQ05 1017 aa8.49□□□□□ -1.05
SCFD1-212ENST00000554486 CRYBG1Q9Y4K1 1723 aa8.49□□□□□ -1.05
SCFD1-212ENST00000554486 MED1Q15648 1581 aaPredicted RBP8.48□□□□□ -1.05
SCFD1-212ENST00000554486 MAP2P11137 1827 aaKnown RBP8.48□□□□□ -1.05
SCFD1-212ENST00000554486 A6NHS1 94 aa8.48□□□□□ -1.05
SCFD1-212ENST00000554486 ALAS2P22557 587 aa8.48□□□□□ -1.05
SCFD1-212ENST00000554486 FBLN1P23142 703 aa8.48□□□□□ -1.05
SCFD1-212ENST00000554486 PCBP4P57723 403 aaKnown RBP8.48□□□□□ -1.05
SCFD1-212ENST00000554486 RALBP1Q15311 655 aa8.48□□□□□ -1.05
SCFD1-212ENST00000554486 COG3Q96JB2 828 aa8.48□□□□□ -1.05
SCFD1-212ENST00000554486 FAM129BQ96TA1 746 aa8.48□□□□□ -1.05
SCFD1-212ENST00000554486 SLC30A3Q99726 388 aa8.48□□□□□ -1.05
SCFD1-212ENST00000554486 RBCK1Q9BYM8 510 aa8.48□□□□□ -1.05
SCFD1-212ENST00000554486 GSX2Q9BZM3 304 aa8.48□□□□□ -1.05
SCFD1-212ENST00000554486 DCTN4Q9UJW0 460 aa8.48□□□□□ -1.05
SCFD1-212ENST00000554486 SLIT3O75094 1523 aa8.48□□□□□ -1.05
SCFD1-212ENST00000554486 USP19O94966 1318 aa8.48□□□□□ -1.05
SCFD1-212ENST00000554486 ARHGEF10O15013 1369 aa8.48□□□□□ -1.05
SCFD1-212ENST00000554486 EGFRP00533 1210 aa8.47□□□□□ -1.05
SCFD1-212ENST00000554486 TNNT2P45379 298 aaPredicted RBP8.47□□□□□ -1.05
SCFD1-212ENST00000554486 GSK3AP49840 483 aa8.47□□□□□ -1.05
SCFD1-212ENST00000554486 MFAP1P55081 439 aaKnown RBP8.47□□□□□ -1.05
SCFD1-212ENST00000554486 CCDC27Q2M243 656 aa8.47□□□□□ -1.05
SCFD1-212ENST00000554486 SYT9Q86SS6 491 aa8.47□□□□□ -1.05
SCFD1-212ENST00000554486 NLRP13Q86W25 1043 aa8.47□□□□□ -1.05
SCFD1-212ENST00000554486 CMTR1Q8N1G2 835 aaKnown RBP8.47□□□□□ -1.05
SCFD1-212ENST00000554486 NFAT5O94916 1531 aa8.47□□□□□ -1.05
SCFD1-212ENST00000554486 PHRF1Q9P1Y6 1649 aaKnown RBP8.47□□□□□ -1.05
SCFD1-212ENST00000554486 ABCA3Q99758 1704 aa8.46□□□□□ -1.05
SCFD1-212ENST00000554486 PPP2R1AP30153 589 aa8.46□□□□□ -1.06
SCFD1-212ENST00000554486 SPEM2Q0P670 501 aa8.46□□□□□ -1.06
SCFD1-212ENST00000554486 AAMPQ13685 434 aa8.46□□□□□ -1.06
SCFD1-212ENST00000554486 TMC7Q7Z402 723 aa8.46□□□□□ -1.06
SCFD1-212ENST00000554486 PIK3R5Q8WYR1 880 aa8.46□□□□□ -1.06
SCFD1-212ENST00000554486 LRRC59Q96AG4 307 aaKnown RBP8.46□□□□□ -1.06
SCFD1-212ENST00000554486 EFCC1Q9HA90 598 aa8.46□□□□□ -1.06
SCFD1-212ENST00000554486 KLF15Q9UIH9 416 aa8.46□□□□□ -1.06
SCFD1-212ENST00000554486 BRPF3Q9ULD4 1205 aa8.46□□□□□ -1.06
SCFD1-212ENST00000554486 MYBBP1AQ9BQG0 1328 aaKnown RBP8.46□□□□□ -1.06
SCFD1-212ENST00000554486 COL22A1Q8NFW1 1626 aaPredicted RBP8.46□□□□□ -1.06
SCFD1-212ENST00000554486 AATKQ6ZMQ8 1374 aa8.46□□□□□ -1.06
SCFD1-212ENST00000554486 PNPLA6Q8IY17 1366 aa8.46□□□□□ -1.06
SCFD1-212ENST00000554486 GPR182O15218 404 aa8.45□□□□□ -1.06
SCFD1-212ENST00000554486 SIN3BO75182 1162 aa8.45□□□□□ -1.06
SCFD1-212ENST00000554486 GCP02774 474 aa8.45□□□□□ -1.06
SCFD1-212ENST00000554486 EPB42P16452 691 aa8.45□□□□□ -1.06
SCFD1-212ENST00000554486 MAPK1P28482 360 aa8.45□□□□□ -1.06
SCFD1-212ENST00000554486 HSPA1LP34931 641 aa8.45□□□□□ -1.06
SCFD1-212ENST00000554486 FCHSD1Q86WN1 690 aa8.45□□□□□ -1.06
SCFD1-212ENST00000554486 C11orf16Q9NQ32 467 aa8.45□□□□□ -1.06
SCFD1-212ENST00000554486 ZFATQ9P243 1243 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 193.2 ms