RNA–Protein interactions for RNA: ENST00000551320.1

PRPF40B-214, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-214ENST00000551320 WNK4Q96J92 1243 aa8.7□□□□□ -1.02
PRPF40B-214ENST00000551320 PTPN18Q99952 460 aa8.7□□□□□ -1.02
PRPF40B-214ENST00000551320 PLA2G12BQ9BX93 195 aa8.7□□□□□ -1.02
PRPF40B-214ENST00000551320 ANKRD2Q9GZV1 360 aa8.7□□□□□ -1.02
PRPF40B-214ENST00000551320 CNNM1Q9NRU3 951 aa8.7□□□□□ -1.02
PRPF40B-214ENST00000551320 FKTNO75072 461 aa8.69□□□□□ -1.02
PRPF40B-214ENST00000551320 ZMYND10O75800 440 aa8.69□□□□□ -1.02
PRPF40B-214ENST00000551320 NBPF7P0C2Y1 421 aaPredicted RBP8.69□□□□□ -1.02
PRPF40B-214ENST00000551320 NF2P35240 595 aa8.69□□□□□ -1.02
PRPF40B-214ENST00000551320 FKBP1BP68106 108 aa8.69□□□□□ -1.02
PRPF40B-214ENST00000551320 RASA3Q14644 834 aa8.69□□□□□ -1.02
PRPF40B-214ENST00000551320 LRRC24Q50LG9 513 aa8.69□□□□□ -1.02
PRPF40B-214ENST00000551320 TAF7LQ5H9L4 462 aa8.69□□□□□ -1.02
PRPF40B-214ENST00000551320 LDHAL6AQ6ZMR3 332 aa8.69□□□□□ -1.02
PRPF40B-214ENST00000551320 EPAS1Q99814 870 aa8.69□□□□□ -1.02
PRPF40B-214ENST00000551320 TMEM39BQ9GZU3 492 aa8.69□□□□□ -1.02
PRPF40B-214ENST00000551320 MYH16Q9H6N6 1097 aa8.69□□□□□ -1.02
PRPF40B-214ENST00000551320 TRIM17Q9Y577 477 aa8.69□□□□□ -1.02
PRPF40B-214ENST00000551320 PCDHGA10Q9Y5H3 936 aa8.69□□□□□ -1.02
PRPF40B-214ENST00000551320 ZNF609O15014 1411 aa8.69□□□□□ -1.02
PRPF40B-214ENST00000551320 CRHR2Q13324 411 aa8.68□□□□□ -1.02
PRPF40B-214ENST00000551320 APOBEC3FQ8IUX4 373 aaKnown RBP8.68□□□□□ -1.02
PRPF40B-214ENST00000551320 FAM84BQ96KN1 310 aaPredicted RBP8.68□□□□□ -1.02
PRPF40B-214ENST00000551320 ZNF70Q9UC06 446 aaPredicted RBP8.68□□□□□ -1.02
PRPF40B-214ENST00000551320 TTF2Q9UNY4 1162 aaKnown RBP8.68□□□□□ -1.02
PRPF40B-214ENST00000551320 A0A1B0GUL6 1792 aa8.68□□□□□ -1.02
PRPF40B-214ENST00000551320 ZSWIM8A7E2V4 1837 aa8.67□□□□□ -1.02
PRPF40B-214ENST00000551320 GRM8O00222 908 aa8.67□□□□□ -1.02
PRPF40B-214ENST00000551320 GPR37O15354 613 aa8.67□□□□□ -1.02
PRPF40B-214ENST00000551320 SLURP2P0DP57 97 aa8.67□□□□□ -1.02
PRPF40B-214ENST00000551320 IL1R1P14778 569 aa8.67□□□□□ -1.02
PRPF40B-214ENST00000551320 EN2P19622 333 aaPredicted RBP8.67□□□□□ -1.02
PRPF40B-214ENST00000551320 KIAA0100Q14667 2235 aaKnown RBP8.67□□□□□ -1.02
PRPF40B-214ENST00000551320 CCDC27Q2M243 656 aa8.67□□□□□ -1.02
PRPF40B-214ENST00000551320 CCDC57Q2TAC2 916 aa8.67□□□□□ -1.02
PRPF40B-214ENST00000551320 MFSD14BQ5SR56 506 aa8.67□□□□□ -1.02
PRPF40B-214ENST00000551320 OTOP1Q7RTM1 612 aa8.67□□□□□ -1.02
PRPF40B-214ENST00000551320 ZNF804AQ7Z570 1209 aa8.67□□□□□ -1.02
PRPF40B-214ENST00000551320 MYO3BQ8WXR4 1341 aa8.67□□□□□ -1.02
PRPF40B-214ENST00000551320 ARHGAP39Q9C0H5 1083 aa8.67□□□□□ -1.02
PRPF40B-214ENST00000551320 BICC1Q9H694 974 aaKnown RBP8.67□□□□□ -1.02
PRPF40B-214ENST00000551320 C9orf78Q9NZ63 289 aaPredicted RBP8.67□□□□□ -1.02
PRPF40B-214ENST00000551320 CEP290O15078 2479 aa8.66□□□□□ -1.02
PRPF40B-214ENST00000551320 IL16Q14005 1332 aa8.66□□□□□ -1.02
PRPF40B-214ENST00000551320 BCAMP50895 628 aa8.66□□□□□ -1.02
PRPF40B-214ENST00000551320 FOSBP53539 338 aa8.66□□□□□ -1.02
PRPF40B-214ENST00000551320 SREBF2Q12772 1141 aa8.66□□□□□ -1.02
PRPF40B-214ENST00000551320 TYW1BQ6NUM6 668 aa8.66□□□□□ -1.02
PRPF40B-214ENST00000551320 FBXO46Q6PJ61 603 aaPredicted RBP8.66□□□□□ -1.02
PRPF40B-214ENST00000551320 ANKRD44Q8N8A2 993 aa8.66□□□□□ -1.02
PRPF40B-214ENST00000551320 ZNF454Q8N9F8 522 aa8.66□□□□□ -1.02
PRPF40B-214ENST00000551320 ZKSCAN4Q969J2 545 aaPredicted RBP8.66□□□□□ -1.02
PRPF40B-214ENST00000551320 OPTNQ96CV9 577 aa8.66□□□□□ -1.02
PRPF40B-214ENST00000551320 TEPSINQ96N21 525 aa8.66□□□□□ -1.02
PRPF40B-214ENST00000551320 LHX6Q9UPM6 363 aa8.66□□□□□ -1.02
PRPF40B-214ENST00000551320 MAP3K7O43318 606 aa8.65□□□□□ -1.02
PRPF40B-214ENST00000551320 PPP1R12BO60237 982 aaPredicted RBP8.65□□□□□ -1.02
PRPF40B-214ENST00000551320 HOXB1P14653 301 aaPredicted RBP8.65□□□□□ -1.02
PRPF40B-214ENST00000551320 HIBADHP31937 336 aaKnown RBP8.65□□□□□ -1.02
PRPF40B-214ENST00000551320 CRKP46108 304 aa8.65□□□□□ -1.02
PRPF40B-214ENST00000551320 VGLL4Q14135 290 aa8.65□□□□□ -1.02
PRPF40B-214ENST00000551320 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.65□□□□□ -1.02
PRPF40B-214ENST00000551320 MIGA2Q7L4E1 593 aa8.65□□□□□ -1.02
PRPF40B-214ENST00000551320 DZIP1LQ8IYY4 767 aaKnown RBP8.65□□□□□ -1.02
PRPF40B-214ENST00000551320 FAM43AQ8N2R8 423 aa8.65□□□□□ -1.02
PRPF40B-214ENST00000551320 TDRD7Q8NHU6 1098 aaKnown RBP8.65□□□□□ -1.02
PRPF40B-214ENST00000551320 BRI3BPQ8WY22 251 aa8.65□□□□□ -1.02
PRPF40B-214ENST00000551320 RIPOR2Q9Y4F9 1068 aa8.65□□□□□ -1.02
PRPF40B-214ENST00000551320 OTOFQ9HC10 1997 aa8.64□□□□□ -1.03
PRPF40B-214ENST00000551320 MANSC4A6NHS7 340 aaPredicted RBP8.64□□□□□ -1.03
PRPF40B-214ENST00000551320 METTL24Q5JXM2 366 aa8.64□□□□□ -1.03
PRPF40B-214ENST00000551320 C15orf52Q6ZUT6 534 aaKnown RBP8.64□□□□□ -1.03
PRPF40B-214ENST00000551320 WDR63Q8IWG1 891 aa8.64□□□□□ -1.03
PRPF40B-214ENST00000551320 MTMR14Q8NCE2 650 aa8.64□□□□□ -1.03
PRPF40B-214ENST00000551320 CDCA7LQ96GN5 454 aa8.64□□□□□ -1.03
PRPF40B-214ENST00000551320 SRCIN1Q9C0H9 1055 aa8.64□□□□□ -1.03
PRPF40B-214ENST00000551320 CDHR5Q9HBB8 845 aa8.64□□□□□ -1.03
PRPF40B-214ENST00000551320 SLC24A3Q9HC58 644 aa8.64□□□□□ -1.03
PRPF40B-214ENST00000551320 PCDH10Q9P2E7 1040 aa8.64□□□□□ -1.03
PRPF40B-214ENST00000551320 FAM205AQ6ZU69 1335 aa8.63□□□□□ -1.03
PRPF40B-214ENST00000551320 CCL15-CCL14A0A0B4J2E2 113 aa8.63□□□□□ -1.03
PRPF40B-214ENST00000551320 MYO1BO43795 1136 aa8.63□□□□□ -1.03
PRPF40B-214ENST00000551320 FRAT2O75474 233 aaPredicted RBP8.63□□□□□ -1.03
PRPF40B-214ENST00000551320 IREB2P48200 963 aaKnown RBP8.63□□□□□ -1.03
PRPF40B-214ENST00000551320 TCP10Q12799 353 aa8.63□□□□□ -1.03
PRPF40B-214ENST00000551320 MAP3K11Q16584 847 aa8.63□□□□□ -1.03
PRPF40B-214ENST00000551320 CCL15Q16663 113 aa8.63□□□□□ -1.03
PRPF40B-214ENST00000551320 TSR1Q2NL82 804 aaKnown RBP8.63□□□□□ -1.03
PRPF40B-214ENST00000551320 SUPT20HL1Q3ZLR7 823 aa8.63□□□□□ -1.03
PRPF40B-214ENST00000551320 PRPF38BQ5VTL8 546 aaKnown RBP8.63□□□□□ -1.03
PRPF40B-214ENST00000551320 MRPL50Q8N5N7 158 aaKnown RBP8.63□□□□□ -1.03
PRPF40B-214ENST00000551320 SH3TC2Q8TF17 1288 aa8.63□□□□□ -1.03
PRPF40B-214ENST00000551320 ZDHHC16Q969W1 377 aa8.63□□□□□ -1.03
PRPF40B-214ENST00000551320 SIL1Q9H173 461 aa8.63□□□□□ -1.03
PRPF40B-214ENST00000551320 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.63□□□□□ -1.03
PRPF40B-214ENST00000551320 PTPN22Q9Y2R2 807 aa8.63□□□□□ -1.03
PRPF40B-214ENST00000551320 PTCH2Q9Y6C5 1203 aa8.63□□□□□ -1.03
PRPF40B-214ENST00000551320 ANP32CO43423 234 aa8.62□□□□□ -1.03
PRPF40B-214ENST00000551320 CTGFP29279 349 aa8.62□□□□□ -1.03
PRPF40B-214ENST00000551320 INPP5BP32019 993 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms