RNA–Protein interactions for RNA: ENST00000550069.1

PFDN5-209, Transcript of prefoldin subunit 5, humanhuman

TSL 2

Gene PFDN5, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-209ENST00000550069 SH2B1Q9NRF2 756 aaPredicted RBP7.91□□□□□ -1.14
PFDN5-209ENST00000550069 DCTN4Q9UJW0 460 aa7.91□□□□□ -1.14
PFDN5-209ENST00000550069 NEURL4Q96JN8 1562 aa7.91□□□□□ -1.14
PFDN5-209ENST00000550069 CFAP65Q6ZU64 1925 aaKnown RBP7.91□□□□□ -1.14
PFDN5-209ENST00000550069 SETD5Q9C0A6 1442 aa7.9□□□□□ -1.14
PFDN5-209ENST00000550069 NUP155O75694 1391 aa7.9□□□□□ -1.14
PFDN5-209ENST00000550069 METTL12A8MUP2 240 aa7.9□□□□□ -1.14
PFDN5-209ENST00000550069 CD163Q86VB7 1156 aa7.9□□□□□ -1.14
PFDN5-209ENST00000550069 WFDC8Q8IUA0 241 aa7.9□□□□□ -1.14
PFDN5-209ENST00000550069 IL22RA1Q8N6P7 574 aa7.9□□□□□ -1.14
PFDN5-209ENST00000550069 TMC1Q8TDI8 760 aa7.9□□□□□ -1.14
PFDN5-209ENST00000550069 SETDB2Q96T68 719 aa7.9□□□□□ -1.14
PFDN5-209ENST00000550069 BCL11AQ9H165 835 aa7.9□□□□□ -1.14
PFDN5-209ENST00000550069 POLR1AO95602 1720 aaPredicted RBP7.89□□□□□ -1.15
PFDN5-209ENST00000550069 PIK3C2BO00750 1634 aa7.89□□□□□ -1.15
PFDN5-209ENST00000550069 UGGT1Q9NYU2 1555 aa7.89□□□□□ -1.15
PFDN5-209ENST00000550069 C1QTNF9BB2RNN3 333 aa7.89□□□□□ -1.15
PFDN5-209ENST00000550069 EPHA1P21709 976 aa7.89□□□□□ -1.15
PFDN5-209ENST00000550069 FMR1NBQ8N0W7 255 aaPredicted RBP7.89□□□□□ -1.15
PFDN5-209ENST00000550069 OSMRQ99650 979 aa7.89□□□□□ -1.15
PFDN5-209ENST00000550069 NOP53Q9NZM5 478 aaKnown RBP7.89□□□□□ -1.15
PFDN5-209ENST00000550069 AMOTL2Q9Y2J4 779 aa7.89□□□□□ -1.15
PFDN5-209ENST00000550069 SPHKAPQ2M3C7 1700 aa7.89□□□□□ -1.15
PFDN5-209ENST00000550069 E9PCH4 1651 aa7.89□□□□□ -1.15
PFDN5-209ENST00000550069 SLIT1O75093 1534 aa7.88□□□□□ -1.15
PFDN5-209ENST00000550069 MED14O60244 1454 aa7.88□□□□□ -1.15
PFDN5-209ENST00000550069 EIF1AYO14602 144 aaKnown RBP7.88□□□□□ -1.15
PFDN5-209ENST00000550069 TM4SF5O14894 197 aa7.88□□□□□ -1.15
PFDN5-209ENST00000550069 SELPP16109 830 aa7.88□□□□□ -1.15
PFDN5-209ENST00000550069 HGSNATQ68CP4 663 aa7.88□□□□□ -1.15
PFDN5-209ENST00000550069 GPAT2Q6NUI2 795 aa7.88□□□□□ -1.15
PFDN5-209ENST00000550069 PI16Q6UXB8 463 aa7.88□□□□□ -1.15
PFDN5-209ENST00000550069 SPACA7Q96KW9 195 aa7.88□□□□□ -1.15
PFDN5-209ENST00000550069 UBR1Q8IWV7 1749 aa7.88□□□□□ -1.15
PFDN5-209ENST00000550069 IQSEC2Q5JU85 1478 aa7.87□□□□□ -1.15
PFDN5-209ENST00000550069 KIF1BO60333 1816 aa7.87□□□□□ -1.15
PFDN5-209ENST00000550069 A0A1W2PP55 124 aa7.87□□□□□ -1.15
PFDN5-209ENST00000550069 PROCP04070 461 aa7.87□□□□□ -1.15
PFDN5-209ENST00000550069 CENPBP07199 599 aaPredicted RBP7.87□□□□□ -1.15
PFDN5-209ENST00000550069 SPATA31C1P0DKV0 1188 aa7.87□□□□□ -1.15
PFDN5-209ENST00000550069 DSC3Q14574 896 aa7.87□□□□□ -1.15
PFDN5-209ENST00000550069 GALNT11Q8NCW6 608 aa7.87□□□□□ -1.15
PFDN5-209ENST00000550069 CARD10Q9BWT7 1032 aa7.87□□□□□ -1.15
PFDN5-209ENST00000550069 RBSNQ9H1K0 784 aa7.87□□□□□ -1.15
PFDN5-209ENST00000550069 NPHS2Q9NP85 383 aa7.87□□□□□ -1.15
PFDN5-209ENST00000550069 ARHGAP23Q9P227 1491 aa7.87□□□□□ -1.15
PFDN5-209ENST00000550069 LINC01387J3KSC0 135 aa7.86□□□□□ -1.15
PFDN5-209ENST00000550069 PDE2AO00408 941 aaPredicted RBP7.86□□□□□ -1.15
PFDN5-209ENST00000550069 SMNDC1O75940 238 aaKnown RBP eCLIP7.86□□□□□ -1.15
PFDN5-209ENST00000550069 TRIM28Q13263 835 aaKnown RBP7.86□□□□□ -1.15
PFDN5-209ENST00000550069 PDE3BQ13370 1112 aa7.86□□□□□ -1.15
PFDN5-209ENST00000550069 SETDB1Q15047 1291 aa7.86□□□□□ -1.15
PFDN5-209ENST00000550069 ANKLE2Q86XL3 938 aa7.86□□□□□ -1.15
PFDN5-209ENST00000550069 GALNT12Q8IXK2 581 aa7.86□□□□□ -1.15
PFDN5-209ENST00000550069 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.86□□□□□ -1.15
PFDN5-209ENST00000550069 NXPE3Q969Y0 559 aa7.86□□□□□ -1.15
PFDN5-209ENST00000550069 CITED4Q96RK1 184 aa7.86□□□□□ -1.15
PFDN5-209ENST00000550069 TRPM2O94759 1503 aa7.86□□□□□ -1.15
PFDN5-209ENST00000550069 STRCQ7RTU9 1775 aa7.86□□□□□ -1.15
PFDN5-209ENST00000550069 RPGRIP1LQ68CZ1 1315 aa7.85□□□□□ -1.15
PFDN5-209ENST00000550069 ADGRB3O60242 1522 aa7.85□□□□□ -1.15
PFDN5-209ENST00000550069 PIK3R2O00459 728 aa7.85□□□□□ -1.15
PFDN5-209ENST00000550069 CEBPAP49715 358 aaPredicted RBP7.85□□□□□ -1.15
PFDN5-209ENST00000550069 PRRT3Q5FWE3 981 aa7.85□□□□□ -1.15
PFDN5-209ENST00000550069 SND1Q7KZF4 910 aaKnown RBP eCLIP7.85□□□□□ -1.15
PFDN5-209ENST00000550069 EPS8L3Q8TE67 593 aaKnown RBP7.85□□□□□ -1.15
PFDN5-209ENST00000550069 CSRNP1Q96S65 589 aa7.85□□□□□ -1.15
PFDN5-209ENST00000550069 EID1Q9Y6B2 187 aa7.85□□□□□ -1.15
PFDN5-209ENST00000550069 TREHO43280 583 aa7.84□□□□□ -1.15
PFDN5-209ENST00000550069 CPNE3O75131 537 aaKnown RBP7.84□□□□□ -1.15
PFDN5-209ENST00000550069 EDN3P14138 238 aa7.84□□□□□ -1.15
PFDN5-209ENST00000550069 CDC27P30260 824 aa7.84□□□□□ -1.15
PFDN5-209ENST00000550069 ITGAEP38570 1179 aa7.84□□□□□ -1.15
PFDN5-209ENST00000550069 TMEM102Q8N9M5 508 aaPredicted RBP7.84□□□□□ -1.15
PFDN5-209ENST00000550069 PMEPA1Q969W9 287 aa7.84□□□□□ -1.15
PFDN5-209ENST00000550069 CCDC74AQ96AQ1 378 aa7.84□□□□□ -1.15
PFDN5-209ENST00000550069 ALKBH8Q96BT7 664 aaKnown RBP7.84□□□□□ -1.15
PFDN5-209ENST00000550069 TCF12Q99081 682 aa7.84□□□□□ -1.15
PFDN5-209ENST00000550069 SPOCK3Q9BQ16 436 aa7.84□□□□□ -1.15
PFDN5-209ENST00000550069 ADAM19Q9H013 955 aa7.84□□□□□ -1.15
PFDN5-209ENST00000550069 MUC3BQ9H195 1237 aa7.84□□□□□ -1.15
PFDN5-209ENST00000550069 KCNK4Q9NYG8 393 aa7.84□□□□□ -1.15
PFDN5-209ENST00000550069 WWC3Q9ULE0 1092 aa7.84□□□□□ -1.15
PFDN5-209ENST00000550069 SOX13Q9UN79 622 aa7.84□□□□□ -1.15
PFDN5-209ENST00000550069 SYNMO15061 1565 aa7.84□□□□□ -1.15
PFDN5-209ENST00000550069 TMEM131LA2VDJ0 1609 aa7.83□□□□□ -1.16
PFDN5-209ENST00000550069 DLL1O00548 723 aa7.83□□□□□ -1.16
PFDN5-209ENST00000550069 ELNP15502 786 aa7.83□□□□□ -1.16
PFDN5-209ENST00000550069 GRIA4P48058 902 aa7.83□□□□□ -1.16
PFDN5-209ENST00000550069 RAC1P63000 192 aa7.83□□□□□ -1.16
PFDN5-209ENST00000550069 SPRED3Q2MJR0 410 aa7.83□□□□□ -1.16
PFDN5-209ENST00000550069 VN1R5Q7Z5H4 357 aa7.83□□□□□ -1.16
PFDN5-209ENST00000550069 FBXO11Q86XK2 927 aa7.83□□□□□ -1.16
PFDN5-209ENST00000550069 DMRTB1Q96MA1 342 aa7.83□□□□□ -1.16
PFDN5-209ENST00000550069 DIP2AQ14689 1571 aa7.83□□□□□ -1.16
PFDN5-209ENST00000550069 PIK3R4Q99570 1358 aa7.83□□□□□ -1.16
PFDN5-209ENST00000550069 TMEM2Q9UHN6 1383 aa7.83□□□□□ -1.16
PFDN5-209ENST00000550069 SCAF11Q99590 1463 aaKnown RBP7.82□□□□□ -1.16
PFDN5-209ENST00000550069 SPDYE3A6NKU9 549 aa7.82□□□□□ -1.16
PFDN5-209ENST00000550069 DDX3YO15523 660 aaKnown RBP7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms