RNA–Protein interactions for RNA: ENST00000542698.1

PRKAB1-207, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

TSL 1 (best)

Gene PRKAB1, Length 4,019 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-207ENST00000542698 ERCC6LQ2NKX8 1250 aa9.34□□□□□ -0.91
PRKAB1-207ENST00000542698 ZNF569Q5MCW4 686 aa9.34□□□□□ -0.91
PRKAB1-207ENST00000542698 CACNA2D4Q7Z3S7 1137 aa9.34□□□□□ -0.91
PRKAB1-207ENST00000542698 MIGA1Q8NAN2 632 aa9.34□□□□□ -0.91
PRKAB1-207ENST00000542698 TRIM47Q96LD4 638 aa9.34□□□□□ -0.91
PRKAB1-207ENST00000542698 RTEL1Q9NZ71 1219 aa9.34□□□□□ -0.91
PRKAB1-207ENST00000542698 IFT172Q9UG01 1749 aa9.34□□□□□ -0.91
PRKAB1-207ENST00000542698 ADGRB1O14514 1584 aa9.34□□□□□ -0.91
PRKAB1-207ENST00000542698 FRMPD1Q5SYB0 1578 aa9.34□□□□□ -0.91
PRKAB1-207ENST00000542698 CRB1P82279 1406 aa9.34□□□□□ -0.91
PRKAB1-207ENST00000542698 A0A1W2PQ27 194 aa9.34□□□□□ -0.91
PRKAB1-207ENST00000542698 A0A1W2PQ64 194 aa9.34□□□□□ -0.91
PRKAB1-207ENST00000542698 A0A1W2PQD8 194 aa9.34□□□□□ -0.91
PRKAB1-207ENST00000542698 RESTQ13127 1097 aa9.34□□□□□ -0.91
PRKAB1-207ENST00000542698 LRRC24Q50LG9 513 aa9.34□□□□□ -0.91
PRKAB1-207ENST00000542698 C11orf57Q6ZUT1 292 aaPredicted RBP9.34□□□□□ -0.91
PRKAB1-207ENST00000542698 IQUBQ8NA54 791 aa9.34□□□□□ -0.91
PRKAB1-207ENST00000542698 MYL10Q9BUA6 226 aa9.34□□□□□ -0.91
PRKAB1-207ENST00000542698 SEC63Q9UGP8 760 aaKnown RBP9.34□□□□□ -0.91
PRKAB1-207ENST00000542698 PUF60Q9UHX1 559 aaKnown RBP9.34□□□□□ -0.91
PRKAB1-207ENST00000542698 KIAA0754O94854 1291 aa9.34□□□□□ -0.91
PRKAB1-207ENST00000542698 FGFR1OPO95684 399 aaKnown RBP9.34□□□□□ -0.91
PRKAB1-207ENST00000542698 ZMYM1Q5SVZ6 1142 aa9.34□□□□□ -0.91
PRKAB1-207ENST00000542698 SMARCC1Q92922 1105 aaPredicted RBP9.34□□□□□ -0.91
PRKAB1-207ENST00000542698 JADE2Q9NQC1 790 aa9.34□□□□□ -0.91
PRKAB1-207ENST00000542698 RNF216Q9NWF9 866 aaPredicted RBP9.34□□□□□ -0.91
PRKAB1-207ENST00000542698 MYO3AQ8NEV4 1616 aa9.34□□□□□ -0.91
PRKAB1-207ENST00000542698 A0A087WWV3 80 aa9.34□□□□□ -0.92
PRKAB1-207ENST00000542698 PIP4K2BP78356 416 aa9.34□□□□□ -0.92
PRKAB1-207ENST00000542698 AMPD3Q01432 767 aa9.34□□□□□ -0.92
PRKAB1-207ENST00000542698 MAPK8IP2Q13387 824 aaPredicted RBP9.34□□□□□ -0.92
PRKAB1-207ENST00000542698 TOB2Q14106 344 aaPredicted RBP9.34□□□□□ -0.92
PRKAB1-207ENST00000542698 TTLL7Q6ZT98 887 aa9.34□□□□□ -0.92
PRKAB1-207ENST00000542698 CENPHQ9H3R5 247 aa9.34□□□□□ -0.92
PRKAB1-207ENST00000542698 KAT14Q9H8E8 782 aa9.34□□□□□ -0.92
PRKAB1-207ENST00000542698 CLIC4Q9Y696 253 aa9.34□□□□□ -0.92
PRKAB1-207ENST00000542698 DEXIO95424 95 aa9.33□□□□□ -0.92
PRKAB1-207ENST00000542698 CDC25BP30305 580 aa9.33□□□□□ -0.92
PRKAB1-207ENST00000542698 STAT6P42226 847 aa9.33□□□□□ -0.92
PRKAB1-207ENST00000542698 CNGA4Q8IV77 575 aa9.33□□□□□ -0.92
PRKAB1-207ENST00000542698 IGSF22Q8N9C0 903 aa9.33□□□□□ -0.92
PRKAB1-207ENST00000542698 PCDH11XQ9BZA7 1347 aa9.33□□□□□ -0.92
PRKAB1-207ENST00000542698 PCDH11YQ9BZA8 1340 aa9.33□□□□□ -0.92
PRKAB1-207ENST00000542698 PSMA7O14818 248 aa9.33□□□□□ -0.92
PRKAB1-207ENST00000542698 IDEP14735 1019 aa9.33□□□□□ -0.92
PRKAB1-207ENST00000542698 PPP2R3AQ06190 1150 aa9.33□□□□□ -0.92
PRKAB1-207ENST00000542698 DZIP3Q86Y13 1208 aaKnown RBP9.33□□□□□ -0.92
PRKAB1-207ENST00000542698 EHBP1Q8NDI1 1231 aa9.33□□□□□ -0.92
PRKAB1-207ENST00000542698 RAB34Q9BZG1 259 aa9.33□□□□□ -0.92
PRKAB1-207ENST00000542698 MYO6Q9UM54 1294 aa9.33□□□□□ -0.92
PRKAB1-207ENST00000542698 CYLC1P35663 651 aaPredicted RBP9.33□□□□□ -0.92
PRKAB1-207ENST00000542698 KRT2P35908 639 aa9.33□□□□□ -0.92
PRKAB1-207ENST00000542698 TCIRG1Q13488 830 aa9.33□□□□□ -0.92
PRKAB1-207ENST00000542698 PNOCQ13519 176 aa9.33□□□□□ -0.92
PRKAB1-207ENST00000542698 SAMD1Q6SPF0 538 aaPredicted RBP9.33□□□□□ -0.92
PRKAB1-207ENST00000542698 PGBD1Q96JS3 809 aa9.33□□□□□ -0.92
PRKAB1-207ENST00000542698 IL25Q9H293 177 aa9.33□□□□□ -0.92
PRKAB1-207ENST00000542698 STX8Q9UNK0 236 aa9.33□□□□□ -0.92
PRKAB1-207ENST00000542698 IGKV5-2P06315 115 aa9.32□□□□□ -0.92
PRKAB1-207ENST00000542698 TUBBP07437 444 aa9.32□□□□□ -0.92
PRKAB1-207ENST00000542698 CALM1P0DP23 149 aa9.32□□□□□ -0.92
PRKAB1-207ENST00000542698 CALM2P0DP24 149 aa9.32□□□□□ -0.92
PRKAB1-207ENST00000542698 CALM3P0DP25 149 aa9.32□□□□□ -0.92
PRKAB1-207ENST00000542698 POSTNQ15063 836 aa9.32□□□□□ -0.92
PRKAB1-207ENST00000542698 DPCR1Q3MIW9 517 aa9.32□□□□□ -0.92
PRKAB1-207ENST00000542698 TDRD12Q587J7 1177 aaKnown RBP9.32□□□□□ -0.92
PRKAB1-207ENST00000542698 LINC00301Q8NCQ3 95 aa9.32□□□□□ -0.92
PRKAB1-207ENST00000542698 TAF4BQ92750 862 aa9.32□□□□□ -0.92
PRKAB1-207ENST00000542698 CRNKL1Q9BZJ0 848 aaKnown RBP9.32□□□□□ -0.92
PRKAB1-207ENST00000542698 SPTLC3Q9NUV7 552 aa9.32□□□□□ -0.92
PRKAB1-207ENST00000542698 MAGEB6P1A0A0J9YX57 407 aa9.32□□□□□ -0.92
PRKAB1-207ENST00000542698 AKR1B10O60218 316 aa9.32□□□□□ -0.92
PRKAB1-207ENST00000542698 SPECC1LQ69YQ0 1117 aa9.32□□□□□ -0.92
PRKAB1-207ENST00000542698 CTR9Q6PD62 1173 aa9.32□□□□□ -0.92
PRKAB1-207ENST00000542698 FAM114A1Q8IWE2 563 aa9.32□□□□□ -0.92
PRKAB1-207ENST00000542698 GPR108Q9NPR9 543 aa9.32□□□□□ -0.92
PRKAB1-207ENST00000542698 PODXL2Q9NZ53 605 aa9.32□□□□□ -0.92
PRKAB1-207ENST00000542698 ZNF532Q9HCE3 1301 aa9.32□□□□□ -0.92
PRKAB1-207ENST00000542698 PSDA5PKW4 1024 aaPredicted RBP9.32□□□□□ -0.92
PRKAB1-207ENST00000542698 VWA3AA6NCI4 1184 aa9.32□□□□□ -0.92
PRKAB1-207ENST00000542698 MYO1BO43795 1136 aa9.32□□□□□ -0.92
PRKAB1-207ENST00000542698 ANKRD18AQ8IVF6 992 aa9.32□□□□□ -0.92
PRKAB1-207ENST00000542698 CALML4Q96GE6 196 aa9.32□□□□□ -0.92
PRKAB1-207ENST00000542698 CCDC43Q96MW1 224 aaKnown RBP9.32□□□□□ -0.92
PRKAB1-207ENST00000542698 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.32□□□□□ -0.92
PRKAB1-207ENST00000542698 TCEAL9Q9UHQ7 104 aa9.32□□□□□ -0.92
PRKAB1-207ENST00000542698 GUCA1BQ9UMX6 200 aa9.32□□□□□ -0.92
PRKAB1-207ENST00000542698 RHOXF2BP0C7M4 288 aa9.31□□□□□ -0.92
PRKAB1-207ENST00000542698 CAPN2P17655 700 aa9.31□□□□□ -0.92
PRKAB1-207ENST00000542698 CALML3P27482 149 aa9.31□□□□□ -0.92
PRKAB1-207ENST00000542698 SLC39A14Q15043 492 aa9.31□□□□□ -0.92
PRKAB1-207ENST00000542698 PUM3Q15397 648 aaKnown RBP9.31□□□□□ -0.92
PRKAB1-207ENST00000542698 ZNF174Q15697 407 aa9.31□□□□□ -0.92
PRKAB1-207ENST00000542698 ODF2Q5BJF6 829 aa9.31□□□□□ -0.92
PRKAB1-207ENST00000542698 EPHA10Q5JZY3 1008 aa9.31□□□□□ -0.92
PRKAB1-207ENST00000542698 RHOXF2Q9BQY4 288 aa9.31□□□□□ -0.92
PRKAB1-207ENST00000542698 ARMT1Q9H993 441 aa9.31□□□□□ -0.92
PRKAB1-207ENST00000542698 POLR3EQ9NVU0 708 aa9.31□□□□□ -0.92
PRKAB1-207ENST00000542698 FANCLQ9NW38 375 aa9.31□□□□□ -0.92
PRKAB1-207ENST00000542698 KCNJ14Q9UNX9 436 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms