RNA–Protein interactions for RNA: ENST00000542286.5

DDX55-209, Transcript of DEAD-box helicase 55, humanhuman

TSL 2

Gene DDX55, Length 2,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-209ENST00000542286 CCDC73Q6ZRK6 1079 aa17.2■□□□□ 0.34
DDX55-209ENST00000542286 FBXO18Q8NFZ0 1043 aa17.2■□□□□ 0.34
DDX55-209ENST00000542286 ABCF2Q9UG63 623 aa17.2■□□□□ 0.34
DDX55-209ENST00000542286 ARID4AP29374 1257 aaPredicted RBP17.2■□□□□ 0.34
DDX55-209ENST00000542286 GYG1P46976 350 aa17.2■□□□□ 0.34
DDX55-209ENST00000542286 STK38Q15208 465 aa17.2■□□□□ 0.34
DDX55-209ENST00000542286 SF3A1Q15459 793 aaKnown RBP17.2■□□□□ 0.34
DDX55-209ENST00000542286 ERVV-1B6SEH8 477 aa17.19■□□□□ 0.34
DDX55-209ENST00000542286 PDIA4P13667 645 aaKnown RBP17.19■□□□□ 0.34
DDX55-209ENST00000542286 METAP2P50579 478 aaKnown RBP eCLIP17.19■□□□□ 0.34
DDX55-209ENST00000542286 EVCP57679 992 aa17.19■□□□□ 0.34
DDX55-209ENST00000542286 EVX2Q03828 476 aa17.19■□□□□ 0.34
DDX55-209ENST00000542286 IFNL3Q8IZI9 196 aa17.19■□□□□ 0.34
DDX55-209ENST00000542286 ENGASEQ8NFI3 743 aa17.19■□□□□ 0.34
DDX55-209ENST00000542286 SDR42E1Q8WUS8 393 aa17.19■□□□□ 0.34
DDX55-209ENST00000542286 ZSWIM5Q9P217 1185 aa17.19■□□□□ 0.34
DDX55-209ENST00000542286 ANGEL1Q9UNK9 670 aaKnown RBP17.19■□□□□ 0.34
DDX55-209ENST00000542286 JAG2Q9Y219 1238 aa17.19■□□□□ 0.34
DDX55-209ENST00000542286 SPEF2Q9C093 1822 aa17.19■□□□□ 0.34
DDX55-209ENST00000542286 COL16A1Q07092 1604 aaPredicted RBP17.19■□□□□ 0.34
DDX55-209ENST00000542286 SH2B2O14492 632 aaPredicted RBP17.19■□□□□ 0.34
DDX55-209ENST00000542286 CCDC144BQ3MJ40 725 aa17.19■□□□□ 0.34
DDX55-209ENST00000542286 ZNF396Q96N95 335 aaPredicted RBP17.19■□□□□ 0.34
DDX55-209ENST00000542286 ROBO1Q9Y6N7 1651 aa17.19■□□□□ 0.34
DDX55-209ENST00000542286 RANBP6O60518 1105 aaKnown RBP17.18■□□□□ 0.34
DDX55-209ENST00000542286 KINO60870 393 aaKnown RBP17.18■□□□□ 0.34
DDX55-209ENST00000542286 IGSF3O75054 1194 aa17.18■□□□□ 0.34
DDX55-209ENST00000542286 UBE3CQ15386 1083 aa17.18■□□□□ 0.34
DDX55-209ENST00000542286 APOA5Q6Q788 366 aa17.18■□□□□ 0.34
DDX55-209ENST00000542286 LINC00301Q8NCQ3 95 aa17.18■□□□□ 0.34
DDX55-209ENST00000542286 ALG1Q9BT22 464 aa17.18■□□□□ 0.34
DDX55-209ENST00000542286 NAPBQ9H115 298 aa17.18■□□□□ 0.34
DDX55-209ENST00000542286 SPATA31A1Q5TZJ5 1347 aa17.18■□□□□ 0.34
DDX55-209ENST00000542286 SLC5A1P13866 664 aa17.18■□□□□ 0.34
DDX55-209ENST00000542286 GUCY1A2P33402 732 aa17.18■□□□□ 0.34
DDX55-209ENST00000542286 CHRNDQ07001 517 aa17.18■□□□□ 0.34
DDX55-209ENST00000542286 MYSM1Q5VVJ2 828 aa17.18■□□□□ 0.34
DDX55-209ENST00000542286 CYP2D7A0A087X1C5 515 aa17.17■□□□□ 0.34
DDX55-209ENST00000542286 U2AF2P26368 475 aaKnown RBP eCLIP17.17■□□□□ 0.34
DDX55-209ENST00000542286 TTF1Q15361 905 aaPredicted RBP17.17■□□□□ 0.34
DDX55-209ENST00000542286 TMEM67Q5HYA8 995 aa17.17■□□□□ 0.34
DDX55-209ENST00000542286 SDF4Q9BRK5 362 aa17.17■□□□□ 0.34
DDX55-209ENST00000542286 GSG1L2A8MUP6 293 aa17.17■□□□□ 0.34
DDX55-209ENST00000542286 WDHD1O75717 1129 aaPredicted RBP17.17■□□□□ 0.34
DDX55-209ENST00000542286 NTSR2O95665 410 aa17.17■□□□□ 0.34
DDX55-209ENST00000542286 ZNF75DP51815 510 aa17.17■□□□□ 0.34
DDX55-209ENST00000542286 KIF23Q02241 960 aaPredicted RBP17.17■□□□□ 0.34
DDX55-209ENST00000542286 FAM160A1Q05DH4 1040 aa17.17■□□□□ 0.34
DDX55-209ENST00000542286 SLC4A8Q2Y0W8 1093 aa17.17■□□□□ 0.34
DDX55-209ENST00000542286 ERFEQ4G0M1 354 aa17.17■□□□□ 0.34
DDX55-209ENST00000542286 ZSCAN25Q6NSZ9 544 aa17.17■□□□□ 0.34
DDX55-209ENST00000542286 MYH15Q9Y2K3 1946 aa17.17■□□□□ 0.34
DDX55-209ENST00000542286 MROH7-TTC4A0A0A0MT08 1334 aa17.17■□□□□ 0.34
DDX55-209ENST00000542286 KLRK1P26718 216 aa17.17■□□□□ 0.34
DDX55-209ENST00000542286 IQCB1Q15051 598 aa17.17■□□□□ 0.34
DDX55-209ENST00000542286 FAM98CQ17RN3 349 aaKnown RBP17.17■□□□□ 0.34
DDX55-209ENST00000542286 SPECC1Q5M775 1068 aa17.17■□□□□ 0.34
DDX55-209ENST00000542286 IGDCC4Q8TDY8 1250 aa17.17■□□□□ 0.34
DDX55-209ENST00000542286 BBXQ8WY36 941 aaPredicted RBP17.17■□□□□ 0.34
DDX55-209ENST00000542286 CHMP4CQ96CF2 233 aa17.17■□□□□ 0.34
DDX55-209ENST00000542286 FAM217BQ9NTX9 383 aaPredicted RBP17.17■□□□□ 0.34
DDX55-209ENST00000542286 LRP2BPQ9P2M1 347 aa17.17■□□□□ 0.34
DDX55-209ENST00000542286 SLC4A4Q9Y6R1 1079 aa17.17■□□□□ 0.34
DDX55-209ENST00000542286 ANKRD36CQ5JPF3 1778 aa17.17■□□□□ 0.34
DDX55-209ENST00000542286 MROH5Q6ZUA9 1318 aa17.16■□□□□ 0.34
DDX55-209ENST00000542286 hCG_1642624A0A1W2PR95 340 aa17.16■□□□□ 0.34
DDX55-209ENST00000542286 RIOK3O14730 519 aaKnown RBP17.16■□□□□ 0.34
DDX55-209ENST00000542286 IFIT3O14879 490 aaKnown RBP17.16■□□□□ 0.34
DDX55-209ENST00000542286 TDO2P48775 406 aa17.16■□□□□ 0.34
DDX55-209ENST00000542286 CLIC6Q96NY7 704 aa17.16■□□□□ 0.34
DDX55-209ENST00000542286 LY9Q9HBG7 655 aa17.16■□□□□ 0.34
DDX55-209ENST00000542286 MINDY4BA8MYZ0 360 aa17.16■□□□□ 0.34
DDX55-209ENST00000542286 KRT40Q6A162 431 aa17.16■□□□□ 0.34
DDX55-209ENST00000542286 FMR1NBQ8N0W7 255 aaPredicted RBP17.16■□□□□ 0.34
DDX55-209ENST00000542286 MRPS27Q92552 414 aaKnown RBP17.16■□□□□ 0.34
DDX55-209ENST00000542286 SLC26A6Q9BXS9 759 aa17.16■□□□□ 0.34
DDX55-209ENST00000542286 SPTLC2O15270 562 aa17.15■□□□□ 0.34
DDX55-209ENST00000542286 UQCRFS1P1P0C7P4 283 aa17.15■□□□□ 0.34
DDX55-209ENST00000542286 MAP3K12Q12852 859 aa17.15■□□□□ 0.34
DDX55-209ENST00000542286 VPS37DQ86XT2 251 aa17.15■□□□□ 0.34
DDX55-209ENST00000542286 AOPEPQ8N6M6 819 aa17.15■□□□□ 0.34
DDX55-209ENST00000542286 TDRD7Q8NHU6 1098 aaKnown RBP17.15■□□□□ 0.34
DDX55-209ENST00000542286 RTEL1Q9NZ71 1219 aa17.15■□□□□ 0.34
DDX55-209ENST00000542286 KCNJ14Q9UNX9 436 aa17.15■□□□□ 0.34
DDX55-209ENST00000542286 GOLGA8AA7E2F4 631 aa17.15■□□□□ 0.34
DDX55-209ENST00000542286 PRDM1O75626 825 aa17.15■□□□□ 0.34
DDX55-209ENST00000542286 IGHMBP2P38935 993 aaKnown RBP17.15■□□□□ 0.34
DDX55-209ENST00000542286 CHAF1AQ13111 956 aaPredicted RBP17.15■□□□□ 0.34
DDX55-209ENST00000542286 PTPN21Q16825 1174 aa17.15■□□□□ 0.34
DDX55-209ENST00000542286 DPCR1Q3MIW9 517 aa17.15■□□□□ 0.34
DDX55-209ENST00000542286 KIAA1524Q8TCG1 905 aa17.15■□□□□ 0.34
DDX55-209ENST00000542286 ZBTB43O43298 467 aa17.14■□□□□ 0.33
DDX55-209ENST00000542286 COL14A1Q05707 1796 aaKnown RBP17.14■□□□□ 0.33
DDX55-209ENST00000542286 ZMYM6O95789 1325 aa17.14■□□□□ 0.33
DDX55-209ENST00000542286 PATL2C9JE40 543 aaKnown RBP17.14■□□□□ 0.33
DDX55-209ENST00000542286 DHX16O60231 1041 aaKnown RBP17.14■□□□□ 0.33
DDX55-209ENST00000542286 ATP2B1P20020 1258 aa17.14■□□□□ 0.33
DDX55-209ENST00000542286 CCDC152Q4G0S7 254 aa17.14■□□□□ 0.33
DDX55-209ENST00000542286 SYNE3Q6ZMZ3 975 aa17.14■□□□□ 0.33
DDX55-209ENST00000542286 PLA2G4DQ86XP0 818 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms