RNA–Protein interactions for RNA: ENST00000541888.2

AC005840.3-201, humanhuman

TSL 5 BASIC

Gene AC005840.3, Length 1,803 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC005840.3-201ENST00000541888 TM4SF1P30408 202 aa9.4□□□□□ -0.9
AC005840.3-201ENST00000541888 PLA2G2CQ5R387 149 aa9.4□□□□□ -0.9
AC005840.3-201ENST00000541888 DDX46Q7L014 1031 aaKnown RBP9.4□□□□□ -0.9
AC005840.3-201ENST00000541888 SLC24A3Q9HC58 644 aa9.4□□□□□ -0.9
AC005840.3-201ENST00000541888 BAG6P46379 1132 aa9.4□□□□□ -0.91
AC005840.3-201ENST00000541888 GUCA2AQ02747 115 aa9.4□□□□□ -0.91
AC005840.3-201ENST00000541888 CHRNDQ07001 517 aa9.4□□□□□ -0.91
AC005840.3-201ENST00000541888 ATP2B3Q16720 1220 aa9.4□□□□□ -0.91
AC005840.3-201ENST00000541888 PARP9Q8IXQ6 854 aa9.4□□□□□ -0.91
AC005840.3-201ENST00000541888 VGLL2Q8N8G2 317 aa9.4□□□□□ -0.91
AC005840.3-201ENST00000541888 XAGE2Q96GT9 111 aa9.4□□□□□ -0.91
AC005840.3-201ENST00000541888 NLRP3Q96P20 1036 aa9.4□□□□□ -0.91
AC005840.3-201ENST00000541888 NYXQ9GZU5 481 aa9.4□□□□□ -0.91
AC005840.3-201ENST00000541888 ANTXR1Q9H6X2 564 aa9.4□□□□□ -0.91
AC005840.3-201ENST00000541888 CIAO1O76071 339 aa9.39□□□□□ -0.91
AC005840.3-201ENST00000541888 IGHMBP2P38935 993 aaKnown RBP9.39□□□□□ -0.91
AC005840.3-201ENST00000541888 SPRYD7Q5W111 196 aa9.39□□□□□ -0.91
AC005840.3-201ENST00000541888 CWC27Q6UX04 472 aaKnown RBP9.39□□□□□ -0.91
AC005840.3-201ENST00000541888 PRDM9Q9NQV7 894 aa9.39□□□□□ -0.91
AC005840.3-201ENST00000541888 AKAP11Q9UKA4 1901 aa9.39□□□□□ -0.91
AC005840.3-201ENST00000541888 GOLIM4O00461 696 aa9.38□□□□□ -0.91
AC005840.3-201ENST00000541888 PDE8BO95263 885 aa9.38□□□□□ -0.91
AC005840.3-201ENST00000541888 PHKA1P46020 1223 aa9.38□□□□□ -0.91
AC005840.3-201ENST00000541888 FKBP4Q02790 459 aaKnown RBP eCLIP9.38□□□□□ -0.91
AC005840.3-201ENST00000541888 MSS51Q4VC12 460 aa9.38□□□□□ -0.91
AC005840.3-201ENST00000541888 GORABQ5T7V8 394 aa9.38□□□□□ -0.91
AC005840.3-201ENST00000541888 ANKRD18AQ8IVF6 992 aa9.38□□□□□ -0.91
AC005840.3-201ENST00000541888 FAM227BQ96M60 508 aa9.38□□□□□ -0.91
AC005840.3-201ENST00000541888 STK32BQ9NY57 414 aa9.38□□□□□ -0.91
AC005840.3-201ENST00000541888 JAG2Q9Y219 1238 aa9.38□□□□□ -0.91
AC005840.3-201ENST00000541888 TTC41PQ6P2S7 1318 aa9.38□□□□□ -0.91
AC005840.3-201ENST00000541888 ARAP2Q8WZ64 1704 aa9.38□□□□□ -0.91
AC005840.3-201ENST00000541888 GLRX3O76003 335 aaKnown RBP9.38□□□□□ -0.91
AC005840.3-201ENST00000541888 CHMLP26374 656 aa9.38□□□□□ -0.91
AC005840.3-201ENST00000541888 SF3B3Q15393 1217 aaKnown RBP9.38□□□□□ -0.91
AC005840.3-201ENST00000541888 SPIRE2Q8WWL2 714 aa9.38□□□□□ -0.91
AC005840.3-201ENST00000541888 GPATCH3Q96I76 525 aa9.38□□□□□ -0.91
AC005840.3-201ENST00000541888 SEC62Q99442 399 aaKnown RBP9.38□□□□□ -0.91
AC005840.3-201ENST00000541888 USB1Q9BQ65 265 aaKnown RBP9.38□□□□□ -0.91
AC005840.3-201ENST00000541888 ZBTB7AO95365 584 aa9.37□□□□□ -0.91
AC005840.3-201ENST00000541888 GYG1P46976 350 aa9.37□□□□□ -0.91
AC005840.3-201ENST00000541888 ST5P78524 1137 aa9.37□□□□□ -0.91
AC005840.3-201ENST00000541888 LAPTM4AQ15012 233 aa9.37□□□□□ -0.91
AC005840.3-201ENST00000541888 SLC10A5Q5PT55 438 aa9.37□□□□□ -0.91
AC005840.3-201ENST00000541888 FSD1Q9BTV5 496 aa9.37□□□□□ -0.91
AC005840.3-201ENST00000541888 BEGAINQ9BUH8 593 aa9.37□□□□□ -0.91
AC005840.3-201ENST00000541888 MINPP1Q9UNW1 487 aa9.37□□□□□ -0.91
AC005840.3-201ENST00000541888 FCF1Q9Y324 198 aaKnown RBP9.37□□□□□ -0.91
AC005840.3-201ENST00000541888 NRXN2Q9P2S2 1712 aa9.36□□□□□ -0.91
AC005840.3-201ENST00000541888 A0A0D9SFI3 127 aa9.36□□□□□ -0.91
AC005840.3-201ENST00000541888 ERC2O15083 957 aa9.36□□□□□ -0.91
AC005840.3-201ENST00000541888 IFIT1P09914 478 aaKnown RBP9.36□□□□□ -0.91
AC005840.3-201ENST00000541888 CHRNA5P30532 468 aa9.36□□□□□ -0.91
AC005840.3-201ENST00000541888 MCAMP43121 646 aa9.36□□□□□ -0.91
AC005840.3-201ENST00000541888 ZAP70P43403 619 aa9.36□□□□□ -0.91
AC005840.3-201ENST00000541888 RPS8P62241 208 aaKnown RBP9.36□□□□□ -0.91
AC005840.3-201ENST00000541888 TTC39AQ5SRH9 613 aa9.36□□□□□ -0.91
AC005840.3-201ENST00000541888 CCDC129Q6ZRS4 1044 aa9.36□□□□□ -0.91
AC005840.3-201ENST00000541888 ZNF598Q86UK7 904 aaKnown RBP9.36□□□□□ -0.91
AC005840.3-201ENST00000541888 TXNRD3Q86VQ6 643 aa9.36□□□□□ -0.91
AC005840.3-201ENST00000541888 CNTROBQ8N137 903 aa9.36□□□□□ -0.91
AC005840.3-201ENST00000541888 RPGRQ92834 1020 aaKnown RBP9.36□□□□□ -0.91
AC005840.3-201ENST00000541888 CDC5LQ99459 802 aaKnown RBP9.36□□□□□ -0.91
AC005840.3-201ENST00000541888 C22orf23Q9BZE7 217 aa9.36□□□□□ -0.91
AC005840.3-201ENST00000541888 MYH13Q9UKX3 1938 aa9.36□□□□□ -0.91
AC005840.3-201ENST00000541888 AOX1Q06278 1338 aa9.36□□□□□ -0.91
AC005840.3-201ENST00000541888 MYH7P12883 1935 aa9.36□□□□□ -0.91
AC005840.3-201ENST00000541888 ATP5JP18859 108 aa9.35□□□□□ -0.91
AC005840.3-201ENST00000541888 PDE4DQ08499 809 aa9.35□□□□□ -0.91
AC005840.3-201ENST00000541888 R3HDM1Q15032 1099 aaKnown RBP9.35□□□□□ -0.91
AC005840.3-201ENST00000541888 CCDC102BQ68D86 513 aa9.35□□□□□ -0.91
AC005840.3-201ENST00000541888 NLGN1Q8N2Q7 840 aa9.35□□□□□ -0.91
AC005840.3-201ENST00000541888 SYMPKQ92797 1274 aaKnown RBP9.35□□□□□ -0.91
AC005840.3-201ENST00000541888 TBC1D32Q96NH3 1257 aa9.35□□□□□ -0.91
AC005840.3-201ENST00000541888 ESYT1Q9BSJ8 1104 aa9.35□□□□□ -0.91
AC005840.3-201ENST00000541888 ANO2Q9NQ90 1003 aa9.35□□□□□ -0.91
AC005840.3-201ENST00000541888 PARP3Q9Y6F1 533 aa9.35□□□□□ -0.91
AC005840.3-201ENST00000541888 RTL9Q8NET4 1388 aa9.35□□□□□ -0.91
AC005840.3-201ENST00000541888 FGFR2P21802 821 aa9.35□□□□□ -0.91
AC005840.3-201ENST00000541888 NMIQ13287 307 aaPredicted RBP9.35□□□□□ -0.91
AC005840.3-201ENST00000541888 PUM3Q15397 648 aaKnown RBP9.35□□□□□ -0.91
AC005840.3-201ENST00000541888 PCDHGC3Q9UN70 934 aa9.35□□□□□ -0.91
AC005840.3-201ENST00000541888 QSER1Q2KHR3 1735 aa9.35□□□□□ -0.91
AC005840.3-201ENST00000541888 MROH5Q6ZUA9 1318 aa9.34□□□□□ -0.91
AC005840.3-201ENST00000541888 SLX4Q8IY92 1834 aa9.34□□□□□ -0.91
AC005840.3-201ENST00000541888 NDUFV2P19404 249 aa9.34□□□□□ -0.91
AC005840.3-201ENST00000541888 MMP16P51512 607 aa9.34□□□□□ -0.91
AC005840.3-201ENST00000541888 RASGRF1Q13972 1273 aa9.34□□□□□ -0.91
AC005840.3-201ENST00000541888 Q6ZNB5 142 aa9.34□□□□□ -0.91
AC005840.3-201ENST00000541888 ZNF589Q86UQ0 364 aaPredicted RBP9.34□□□□□ -0.91
AC005840.3-201ENST00000541888 HAUS7Q99871 368 aa9.34□□□□□ -0.91
AC005840.3-201ENST00000541888 DIAPH3Q9NSV4 1193 aa9.34□□□□□ -0.91
AC005840.3-201ENST00000541888 BSDC1Q9NW68 430 aaPredicted RBP9.34□□□□□ -0.91
AC005840.3-201ENST00000541888 PAG1Q9NWQ8 432 aa9.34□□□□□ -0.91
AC005840.3-201ENST00000541888 ANKIB1Q9P2G1 1089 aa9.34□□□□□ -0.91
AC005840.3-201ENST00000541888 PALD1Q9ULE6 856 aa9.34□□□□□ -0.91
AC005840.3-201ENST00000541888 AKAP2Q9Y2D5 859 aa9.34□□□□□ -0.91
AC005840.3-201ENST00000541888 COL1A1P02452 1464 aaPredicted RBP9.34□□□□□ -0.91
AC005840.3-201ENST00000541888 FDX1P10109 184 aa9.33□□□□□ -0.92
AC005840.3-201ENST00000541888 PTH1RQ03431 593 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 369.4 ms